RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 ZNF501Q96CX3 271 aaPredicted RBP9.98□□□□□ -0.81
RDH11-210ENST00000557331 SMIM14Q96QK8 99 aa9.98□□□□□ -0.81
RDH11-210ENST00000557331 PHF12Q96QT6 1004 aa9.98□□□□□ -0.81
RDH11-210ENST00000557331 MAP3K3Q99759 626 aa9.98□□□□□ -0.81
RDH11-210ENST00000557331 SLC25A51Q9H1U9 297 aa9.98□□□□□ -0.81
RDH11-210ENST00000557331 CHST8Q9H2A9 424 aa9.98□□□□□ -0.81
RDH11-210ENST00000557331 CBX8Q9HC52 389 aa9.98□□□□□ -0.81
RDH11-210ENST00000557331 C1GALT1Q9NS00 363 aa9.98□□□□□ -0.81
RDH11-210ENST00000557331 HACD3Q9P035 362 aa9.98□□□□□ -0.81
RDH11-210ENST00000557331 ANAPC7Q9UJX3 599 aa9.98□□□□□ -0.81
RDH11-210ENST00000557331 ENTPD4Q9Y227 616 aa9.98□□□□□ -0.81
RDH11-210ENST00000557331 CSMD1Q96PZ7 3565 aa9.98□□□□□ -0.81
RDH11-210ENST00000557331 SPTBP11277 2137 aa9.98□□□□□ -0.81
RDH11-210ENST00000557331 TNRC6AQ8NDV7 1962 aaKnown RBP9.97□□□□□ -0.81
RDH11-210ENST00000557331 SLC9B1P1A6NJY1 282 aa9.97□□□□□ -0.81
RDH11-210ENST00000557331 DDX3XO00571 662 aaKnown RBP eCLIP9.97□□□□□ -0.816e-8■■■■■ 52.9
RDH11-210ENST00000557331 PEX12O00623 359 aa9.97□□□□□ -0.81
RDH11-210ENST00000557331 ZNF185O15231 689 aa9.97□□□□□ -0.81
RDH11-210ENST00000557331 POP7O75817 140 aaKnown RBP9.97□□□□□ -0.81
RDH11-210ENST00000557331 NDST3O95803 873 aa9.97□□□□□ -0.81
RDH11-210ENST00000557331 CLDN1O95832 211 aa9.97□□□□□ -0.81
RDH11-210ENST00000557331 EPOP01588 193 aa9.97□□□□□ -0.81
RDH11-210ENST00000557331 ZFXP17010 805 aaPredicted RBP9.97□□□□□ -0.81
RDH11-210ENST00000557331 BPIP17213 487 aa9.97□□□□□ -0.81
RDH11-210ENST00000557331 SSR1P43307 286 aaKnown RBP9.97□□□□□ -0.81
RDH11-210ENST00000557331 ARSEP51690 589 aa9.97□□□□□ -0.81
RDH11-210ENST00000557331 SOX8P57073 446 aa9.97□□□□□ -0.81
RDH11-210ENST00000557331 RPS18P62269 152 aaKnown RBP9.97□□□□□ -0.81
RDH11-210ENST00000557331 PPIDQ08752 370 aaKnown RBP9.97□□□□□ -0.81
RDH11-210ENST00000557331 GPS2Q13227 327 aa9.97□□□□□ -0.81
RDH11-210ENST00000557331 XRCC4Q13426 336 aa9.97□□□□□ -0.81
RDH11-210ENST00000557331 IHHQ14623 411 aa9.97□□□□□ -0.81
RDH11-210ENST00000557331 SSPNQ14714 243 aa9.97□□□□□ -0.81
RDH11-210ENST00000557331 KCNAB1Q14722 419 aa9.97□□□□□ -0.81
RDH11-210ENST00000557331 MYBPC3Q14896 1274 aa9.97□□□□□ -0.81
RDH11-210ENST00000557331 PDK1Q15118 436 aa9.97□□□□□ -0.81
RDH11-210ENST00000557331 NR6A1Q15406 480 aa9.97□□□□□ -0.81
RDH11-210ENST00000557331 STX1AQ16623 288 aa9.97□□□□□ -0.81
RDH11-210ENST00000557331 LONRF2Q1L5Z9 754 aa9.97□□□□□ -0.81
RDH11-210ENST00000557331 ALS2CLQ60I27 953 aa9.97□□□□□ -0.81
RDH11-210ENST00000557331 RBM43Q6ZSC3 357 aaKnown RBP9.97□□□□□ -0.81
RDH11-210ENST00000557331 BZW1Q7L1Q6 419 aaKnown RBP9.97□□□□□ -0.81
RDH11-210ENST00000557331 C11orf96Q7Z7L8 435 aa9.97□□□□□ -0.81
RDH11-210ENST00000557331 ZADH2Q8N4Q0 377 aa9.97□□□□□ -0.81
RDH11-210ENST00000557331 SYN2Q92777 582 aaPredicted RBP9.97□□□□□ -0.81
RDH11-210ENST00000557331 FAF2Q96CS3 445 aa9.97□□□□□ -0.81
RDH11-210ENST00000557331 EID2BQ96D98 161 aa9.97□□□□□ -0.81
RDH11-210ENST00000557331 SNRNP40Q96DI7 357 aaKnown RBP9.97□□□□□ -0.81
RDH11-210ENST00000557331 CLIP3Q96DZ5 547 aa9.97□□□□□ -0.81
RDH11-210ENST00000557331 IMP4Q96G21 291 aaKnown RBP9.97□□□□□ -0.81
RDH11-210ENST00000557331 TRIB3Q96RU7 358 aa9.97□□□□□ -0.81
RDH11-210ENST00000557331 BARD1Q99728 777 aaKnown RBP9.97□□□□□ -0.81
RDH11-210ENST00000557331 CCM2Q9BSQ5 444 aa9.97□□□□□ -0.81
RDH11-210ENST00000557331 NUDT9Q9BW91 350 aa9.97□□□□□ -0.81
RDH11-210ENST00000557331 SLC7A5P2Q9GIP4 190 aa9.97□□□□□ -0.81
RDH11-210ENST00000557331 ILKAPQ9H0C8 392 aaPredicted RBP9.97□□□□□ -0.81
RDH11-210ENST00000557331 ACTR5Q9H9F9 607 aaPredicted RBP9.97□□□□□ -0.81
RDH11-210ENST00000557331 SOHLH2Q9NX45 425 aa9.97□□□□□ -0.81
RDH11-210ENST00000557331 SHOC2Q9UQ13 582 aa9.97□□□□□ -0.81
RDH11-210ENST00000557331 ZNF711Q9Y462 761 aa9.97□□□□□ -0.81
RDH11-210ENST00000557331 COPG1Q9Y678 874 aaKnown RBP9.97□□□□□ -0.81
RDH11-210ENST00000557331 AP1M2Q9Y6Q5 423 aa9.97□□□□□ -0.81
RDH11-210ENST00000557331 SVILO95425 2214 aa9.97□□□□□ -0.81
RDH11-210ENST00000557331 FBN2P35556 2912 aa9.96□□□□□ -0.81
RDH11-210ENST00000557331 PIKFYVEQ9Y2I7 2098 aa9.96□□□□□ -0.81
RDH11-210ENST00000557331 PPP1R12AO14974 1030 aaPredicted RBP9.96□□□□□ -0.82
RDH11-210ENST00000557331 CYP1A2P05177 515 aa9.96□□□□□ -0.82
RDH11-210ENST00000557331 MMP2P08253 660 aa9.96□□□□□ -0.82
RDH11-210ENST00000557331 MTHFD1P11586 935 aaKnown RBP9.96□□□□□ -0.82
RDH11-210ENST00000557331 CYP2A7P20853 494 aa9.96□□□□□ -0.82
RDH11-210ENST00000557331 RORAP35398 523 aa9.96□□□□□ -0.82
RDH11-210ENST00000557331 CHAF1BQ13112 559 aa9.96□□□□□ -0.82
RDH11-210ENST00000557331 NCF4Q15080 339 aa9.96□□□□□ -0.82
RDH11-210ENST00000557331 PLA2G4EQ3MJ16 856 aa9.96□□□□□ -0.82
RDH11-210ENST00000557331 PLEKHN1Q494U1 663 aaPredicted RBP9.96□□□□□ -0.82
RDH11-210ENST00000557331 ATP13A5Q4VNC0 1218 aa9.96□□□□□ -0.82
RDH11-210ENST00000557331 C1QL3Q5VWW1 255 aa9.96□□□□□ -0.82
RDH11-210ENST00000557331 APTXQ7Z2E3 356 aaKnown RBP9.96□□□□□ -0.82
RDH11-210ENST00000557331 GPR135Q8IZ08 494 aa9.96□□□□□ -0.82
RDH11-210ENST00000557331 ST6GALNAC3Q8NDV1 305 aa9.96□□□□□ -0.82
RDH11-210ENST00000557331 IQCDQ96DY2 449 aa9.96□□□□□ -0.82
RDH11-210ENST00000557331 TCTN2Q96GX1 697 aa9.96□□□□□ -0.82
RDH11-210ENST00000557331 VPS50Q96JG6 964 aa9.96□□□□□ -0.82
RDH11-210ENST00000557331 ANP32EQ9BTT0 268 aa9.96□□□□□ -0.82
RDH11-210ENST00000557331 MAK16Q9BXY0 300 aaKnown RBP9.96□□□□□ -0.82
RDH11-210ENST00000557331 MFRPQ9BY79 579 aa9.96□□□□□ -0.82
RDH11-210ENST00000557331 KIR3DX1Q9H7L2 352 aa9.96□□□□□ -0.82
RDH11-210ENST00000557331 AKIRIN1Q9H9L7 192 aaPredicted RBP9.96□□□□□ -0.82
RDH11-210ENST00000557331 ARFGAP3Q9NP61 516 aa9.96□□□□□ -0.82
RDH11-210ENST00000557331 RTN4Q9NQC3 1192 aaKnown RBP9.96□□□□□ -0.82
RDH11-210ENST00000557331 WDR37Q9Y2I8 494 aa9.96□□□□□ -0.82
RDH11-210ENST00000557331 SETD2Q9BYW2 2564 aaPredicted RBP9.96□□□□□ -0.82
RDH11-210ENST00000557331 OTOGQ6ZRI0 2925 aa9.96□□□□□ -0.82
RDH11-210ENST00000557331 F8P00451 2351 aa9.95□□□□□ -0.82
RDH11-210ENST00000557331 MGAT4DA6NG13 374 aa9.95□□□□□ -0.82
RDH11-210ENST00000557331 A6NL46 340 aa9.95□□□□□ -0.82
RDH11-210ENST00000557331 SLC35G4P0C7Q5 338 aa9.95□□□□□ -0.82
RDH11-210ENST00000557331 TCF4P15884 667 aa9.95□□□□□ -0.82
RDH11-210ENST00000557331 CDH3P22223 829 aa9.95□□□□□ -0.82
RDH11-210ENST00000557331 ITGA3P26006 1051 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms