RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 GPN2Q9H9Y4 310 aaPredicted RBP11.25□□□□□ -0.61
SRP54-213ENST00000556994 BPIFA1Q9NP55 256 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 ZIM2Q9NZV7 527 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 VAPAQ9P0L0 249 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 LIMD1Q9UGP4 676 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 GIT1Q9Y2X7 761 aa11.25□□□□□ -0.61
SRP54-213ENST00000556994 POLR3HQ9Y535 204 aaPredicted RBP11.25□□□□□ -0.61
SRP54-213ENST00000556994 MYO16Q9Y6X6 1858 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 A0A0D9SEW6 157 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 TRIM43BA6NCK2 446 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 SYCE1LA8MT33 242 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 E2F3O00716 465 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 GPR39O43194 453 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 MGEA5O60502 916 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 MLYCDO95822 493 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 CAPN1P07384 714 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 ZNF865P0CJ78 1059 aaPredicted RBP11.24□□□□□ -0.61
SRP54-213ENST00000556994 GGT1P19440 569 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 HLA-DPA1P20036 260 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 OGNP20774 298 aaKnown RBP11.24□□□□□ -0.61
SRP54-213ENST00000556994 PBX3P40426 434 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 NRG1Q02297 640 aaPredicted RBP11.24□□□□□ -0.61
SRP54-213ENST00000556994 GSTM4Q03013 218 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 CD47Q08722 323 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 GRIK2Q13002 908 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 CBX2Q14781 532 aaPredicted RBP11.24□□□□□ -0.61
SRP54-213ENST00000556994 NR6A1Q15406 480 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 SKIV2LQ15477 1246 aaKnown RBP11.24□□□□□ -0.61
SRP54-213ENST00000556994 RFTN2Q52LD8 501 aaPredicted RBP11.24□□□□□ -0.61
SRP54-213ENST00000556994 PSAPL1Q6NUJ1 521 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 NIPAL1Q6NVV3 410 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 CYP20A1Q6UW02 462 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 SPESP1Q6UW49 350 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 DNAJC14Q6Y2X3 702 aaPredicted RBP11.24□□□□□ -0.61
SRP54-213ENST00000556994 NCCRP1Q6ZVX7 275 aaPredicted RBP11.24□□□□□ -0.61
SRP54-213ENST00000556994 GPSM1Q86YR5 675 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 PIANPQ8IYJ0 282 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 KLHDC9Q8NEP7 349 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 MDGA1Q8NFP4 955 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 FRS2Q8WU20 508 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 UPF1Q92900 1129 aaKnown RBP eCLIP11.24□□□□□ -0.61
SRP54-213ENST00000556994 LINGO1Q96FE5 620 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 THUMPD3Q9BV44 507 aaKnown RBP11.24□□□□□ -0.61
SRP54-213ENST00000556994 NUSAP1Q9BXS6 441 aaKnown RBP11.24□□□□□ -0.61
SRP54-213ENST00000556994 AASSQ9UDR5 926 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 ADGRE2Q9UHX3 823 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 ZMYM5Q9UJ78 669 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 BAG5Q9UL15 447 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 PDE10AQ9Y233 779 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 U3KQV3 271 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 PTPRDP23468 1912 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 GSTA4O15217 222 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 TBC1D4O60343 1298 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 TULP3O75386 442 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 PRSS23O95084 383 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 TSPAN12O95859 305 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 ALDH4A1P30038 563 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 PIK3CGP48736 1102 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 CPT1AP50416 773 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 RAB15P59190 212 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 LSM3P62310 102 aaKnown RBP11.24□□□□□ -0.61
SRP54-213ENST00000556994 IL10RBQ08334 325 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 KCNAB2Q13303 367 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 TUBA3CQ13748 450 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 FXNQ16595 210 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 TRIM16LQ309B1 348 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 RBM48Q5RL73 367 aaKnown RBP11.24□□□□□ -0.61
SRP54-213ENST00000556994 LAIR2Q6ISS4 152 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 SLC16A12Q6ZSM3 486 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 TMEM179BQ7Z7N9 219 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 GTF3C2Q8WUA4 911 aaPredicted RBP11.24□□□□□ -0.61
SRP54-213ENST00000556994 SDCCAG3Q96C92 435 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 SH3YL1Q96HL8 342 aaPredicted RBP11.24□□□□□ -0.61
SRP54-213ENST00000556994 IKZF5Q9H5V7 419 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 PCDH12Q9NPG4 1184 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 PAK1IP1Q9NWT1 392 aaPredicted RBP11.24□□□□□ -0.61
SRP54-213ENST00000556994 COMMD8Q9NX08 183 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 DAPK2Q9UIK4 370 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 NEUROG3Q9Y4Z2 214 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 NLRC5Q86WI3 1866 aa11.24□□□□□ -0.61
SRP54-213ENST00000556994 MYADML2A6NDP7 307 aa11.23□□□□□ -0.61
SRP54-213ENST00000556994 TMEM247A6NEH6 219 aa11.23□□□□□ -0.61
SRP54-213ENST00000556994 M0QZQ0 153 aa11.23□□□□□ -0.61
SRP54-213ENST00000556994 STX16O14662 325 aa11.23□□□□□ -0.61
SRP54-213ENST00000556994 GPR182O15218 404 aa11.23□□□□□ -0.61
SRP54-213ENST00000556994 XPNPEP2O43895 674 aa11.23□□□□□ -0.61
SRP54-213ENST00000556994 HS6ST1O60243 411 aa11.23□□□□□ -0.61
SRP54-213ENST00000556994 GMNNO75496 209 aa11.23□□□□□ -0.61
SRP54-213ENST00000556994 SERPINF2P08697 491 aa11.23□□□□□ -0.61
SRP54-213ENST00000556994 HOXB8P17481 243 aaPredicted RBP11.23□□□□□ -0.61
SRP54-213ENST00000556994 CD52P31358 61 aa11.23□□□□□ -0.61
SRP54-213ENST00000556994 HALP42357 657 aa11.23□□□□□ -0.61
SRP54-213ENST00000556994 RGRP47804 291 aa11.23□□□□□ -0.61
SRP54-213ENST00000556994 PTGR1Q14914 329 aa11.23□□□□□ -0.61
SRP54-213ENST00000556994 ABRAXAS2Q15018 415 aa11.23□□□□□ -0.61
SRP54-213ENST00000556994 MAPRE1Q15691 268 aaKnown RBP11.23□□□□□ -0.61
SRP54-213ENST00000556994 AP5B1Q2VPB7 878 aa11.23□□□□□ -0.61
SRP54-213ENST00000556994 LDLRAD1Q5T700 205 aa11.23□□□□□ -0.61
SRP54-213ENST00000556994 GLT6D1Q7Z4J2 308 aa11.23□□□□□ -0.61
SRP54-213ENST00000556994 MON1AQ86VX9 555 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms