RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 MAOBP27338 520 aa10.85□□□□□ -0.67
TMEM260-208ENST00000555905 PBLDP30039 288 aaPredicted RBP10.85□□□□□ -0.67
TMEM260-208ENST00000555905 CRHR1P34998 444 aa10.85□□□□□ -0.67
TMEM260-208ENST00000555905 CBSP35520 551 aa10.85□□□□□ -0.67
TMEM260-208ENST00000555905 RGS4P49798 205 aa10.85□□□□□ -0.67
TMEM260-208ENST00000555905 CSRP3P50461 194 aa10.85□□□□□ -0.67
TMEM260-208ENST00000555905 KPNA2P52292 529 aaKnown RBP10.85□□□□□ -0.67
TMEM260-208ENST00000555905 PGGT1BP53609 377 aa10.85□□□□□ -0.67
TMEM260-208ENST00000555905 SRSF5Q13243 272 aaKnown RBP10.85□□□□□ -0.67
TMEM260-208ENST00000555905 BOP1Q14137 746 aaKnown RBP10.85□□□□□ -0.67
TMEM260-208ENST00000555905 SEPT7Q16181 437 aaKnown RBP10.85□□□□□ -0.67
TMEM260-208ENST00000555905 FAM83EQ2M2I3 478 aa10.85□□□□□ -0.67
TMEM260-208ENST00000555905 TSNAXIP1Q2TAA8 658 aa10.85□□□□□ -0.67
TMEM260-208ENST00000555905 PLEKHS1Q5SXH7 462 aa10.85□□□□□ -0.67
TMEM260-208ENST00000555905 AGAP9Q5VTM2 703 aa10.85□□□□□ -0.67
TMEM260-208ENST00000555905 PMS2CLQ68D20 193 aa10.85□□□□□ -0.67
TMEM260-208ENST00000555905 KLC3Q6P597 504 aa10.85□□□□□ -0.67
TMEM260-208ENST00000555905 SH2D5Q6ZV89 423 aa10.85□□□□□ -0.67
TMEM260-208ENST00000555905 AMZ2Q86W34 360 aa10.85□□□□□ -0.67
TMEM260-208ENST00000555905 NKAPQ8N5F7 415 aaKnown RBP10.85□□□□□ -0.67
TMEM260-208ENST00000555905 BANPQ8N9N5 519 aa10.85□□□□□ -0.67
TMEM260-208ENST00000555905 LKAAEAR1Q8TD35 194 aa10.85□□□□□ -0.67
TMEM260-208ENST00000555905 CD200R1Q8TD46 325 aa10.85□□□□□ -0.67
TMEM260-208ENST00000555905 LINC00615Q96LM1 132 aaPredicted RBP10.85□□□□□ -0.67
TMEM260-208ENST00000555905 SELENOSQ9BQE4 189 aa10.85□□□□□ -0.67
TMEM260-208ENST00000555905 COL25A1Q9BXS0 654 aaPredicted RBP10.85□□□□□ -0.67
TMEM260-208ENST00000555905 KRTAP3-3Q9BYR6 98 aa10.85□□□□□ -0.67
TMEM260-208ENST00000555905 KRTAP3-2Q9BYR7 98 aa10.85□□□□□ -0.67
TMEM260-208ENST00000555905 TM9SF3Q9HD45 589 aa10.85□□□□□ -0.67
TMEM260-208ENST00000555905 WDR70Q9NW82 654 aa10.85□□□□□ -0.67
TMEM260-208ENST00000555905 MKS1Q9NXB0 559 aa10.85□□□□□ -0.67
TMEM260-208ENST00000555905 SUFUQ9UMX1 484 aa10.85□□□□□ -0.67
TMEM260-208ENST00000555905 PCDHGA2Q9Y5H1 932 aa10.85□□□□□ -0.67
TMEM260-208ENST00000555905 SPTY2D1-AS1A0A0U1RR47 76 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 MGAT4DA6NG13 374 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 PRR5-ARHGAP8B1AHC4 643 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 TLR4O00206 839 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 EIF3FO00303 357 aaPredicted RBP10.84□□□□□ -0.67
TMEM260-208ENST00000555905 LIN7AO14910 233 aaPredicted RBP10.84□□□□□ -0.67
TMEM260-208ENST00000555905 BCAT2O15382 392 aaPredicted RBP10.84□□□□□ -0.67
TMEM260-208ENST00000555905 PRPF4O43172 522 aaKnown RBP eCLIP10.84□□□□□ -0.67
TMEM260-208ENST00000555905 KCNJ13O60928 360 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 LILRB5O75023 590 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 KLHL2O95198 593 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 WISP3O95389 354 aaPredicted RBP10.84□□□□□ -0.67
TMEM260-208ENST00000555905 LTA4HP09960 611 aaKnown RBP10.84□□□□□ -0.67
TMEM260-208ENST00000555905 ENO3P13929 434 aaPredicted RBP10.84□□□□□ -0.67
TMEM260-208ENST00000555905 GNSP15586 552 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 CREB1P16220 341 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 NR1D1P20393 614 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 CCR7P32248 378 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 GNPDA1P46926 289 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 AFF3P51826 1226 aaKnown RBP10.84□□□□□ -0.67
TMEM260-208ENST00000555905 C21orf59P57076 290 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 SRP54P61011 504 aaKnown RBP10.84□□□□□ -0.67
TMEM260-208ENST00000555905 PPP2R2AP63151 447 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 IRF9Q00978 393 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 PLOD1Q02809 727 aaPredicted RBP10.84□□□□□ -0.67
TMEM260-208ENST00000555905 HSPA14Q0VDF9 509 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 CSHL1Q14406 222 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 TEAD4Q15561 434 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 INSCQ1MX18 579 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 PLA2G4EQ3MJ16 856 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 PLK5Q496M5 336 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 LRRC8EQ6NSJ5 796 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 MTERF4Q7Z6M4 381 aaKnown RBP10.84□□□□□ -0.67
TMEM260-208ENST00000555905 ZNF547Q8IVP9 402 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 CPNE9Q8IYJ1 553 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 SLC22A18ASQ8N1D0 253 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 ZBTB44Q8NCP5 570 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 OR2L2Q8NH16 312 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 GIMAP7Q8NHV1 300 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 HM13Q8TCT9 377 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 EEF1AKMT1Q8WVE0 214 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 KCTD4Q8WVF5 259 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 OR1E3Q8WZA6 343 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 TMEM159Q96B96 161 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 LINGO1Q96FE5 620 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 SCARF2Q96GP6 870 aaPredicted RBP10.84□□□□□ -0.67
TMEM260-208ENST00000555905 ZC3H10Q96K80 434 aaKnown RBP10.84□□□□□ -0.67
TMEM260-208ENST00000555905 UBXN10Q96LJ8 280 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 SLC30A3Q99726 388 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 TIMM29Q9BSF4 260 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 CARS2Q9HA77 564 aaKnown RBP10.84□□□□□ -0.67
TMEM260-208ENST00000555905 NMRAL1Q9HBL8 299 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 CYP4F12Q9HCS2 524 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 FGF22Q9HCT0 170 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 C11orf16Q9NQ32 467 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 MRPL40Q9NQ50 206 aaKnown RBP10.84□□□□□ -0.67
TMEM260-208ENST00000555905 NKIRAS1Q9NYS0 192 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 FAM8A1Q9UBU6 413 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 GRID1Q9ULK0 1009 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 RUVBL2Q9Y230 463 aaKnown RBP10.84□□□□□ -0.67
TMEM260-208ENST00000555905 PRKAB1Q9Y478 270 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 GPSM3Q9Y4H4 160 aa10.84□□□□□ -0.67
TMEM260-208ENST00000555905 A0A1W2PR77 199 aa10.83□□□□□ -0.68
TMEM260-208ENST00000555905 TMEM120BA0PK00 339 aa10.83□□□□□ -0.68
TMEM260-208ENST00000555905 TM9SF1O15321 606 aa10.83□□□□□ -0.68
TMEM260-208ENST00000555905 TYROBPO43914 113 aa10.83□□□□□ -0.68
TMEM260-208ENST00000555905 ZWINTO95229 277 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms