RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 SLC14A2Q15849 920 aa12.28□□□□□ -0.44
SHMT2-214ENST00000554604 LRRC8BQ6P9F7 803 aa12.28□□□□□ -0.44
SHMT2-214ENST00000554604 NRROSQ86YC3 692 aa12.28□□□□□ -0.44
SHMT2-214ENST00000554604 SFTPA2Q8IWL1 248 aa12.28□□□□□ -0.44
SHMT2-214ENST00000554604 CNPY4Q8N129 248 aa12.28□□□□□ -0.44
SHMT2-214ENST00000554604 ZNF567Q8N184 647 aa12.28□□□□□ -0.44
SHMT2-214ENST00000554604 MZB1Q8WU39 189 aa12.28□□□□□ -0.44
SHMT2-214ENST00000554604 PTCD2Q8WV60 388 aaKnown RBP12.28□□□□□ -0.44
SHMT2-214ENST00000554604 SLC44A1Q8WWI5 657 aa12.28□□□□□ -0.44
SHMT2-214ENST00000554604 CKAP2Q8WWK9 683 aa12.28□□□□□ -0.44
SHMT2-214ENST00000554604 ALKBH8Q96BT7 664 aaKnown RBP12.28□□□□□ -0.44
SHMT2-214ENST00000554604 ZNF578Q96N58 590 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-214ENST00000554604 TRIB3Q96RU7 358 aa12.28□□□□□ -0.44
SHMT2-214ENST00000554604 SMC6Q96SB8 1091 aa12.28□□□□□ -0.44
SHMT2-214ENST00000554604 EBNA1BP2Q99848 306 aaKnown RBP12.28□□□□□ -0.44
SHMT2-214ENST00000554604 SPATA16Q9BXB7 569 aa12.28□□□□□ -0.44
SHMT2-214ENST00000554604 STRADBQ9C0K7 418 aa12.28□□□□□ -0.44
SHMT2-214ENST00000554604 FAM107BQ9H098 131 aa12.28□□□□□ -0.44
SHMT2-214ENST00000554604 NSRP1Q9H0G5 558 aaKnown RBP12.28□□□□□ -0.44
SHMT2-214ENST00000554604 LRRN3Q9H3W5 708 aa12.28□□□□□ -0.44
SHMT2-214ENST00000554604 RABEP2Q9H5N1 569 aa12.28□□□□□ -0.44
SHMT2-214ENST00000554604 MAGEE1Q9HCI5 957 aa12.28□□□□□ -0.44
SHMT2-214ENST00000554604 THSD1Q9NS62 852 aa12.28□□□□□ -0.44
SHMT2-214ENST00000554604 RAD18Q9NS91 495 aa12.28□□□□□ -0.44
SHMT2-214ENST00000554604 ZNHIT2Q9UHR6 403 aa12.28□□□□□ -0.44
SHMT2-214ENST00000554604 ZNF180Q9UJW8 692 aa12.28□□□□□ -0.44
SHMT2-214ENST00000554604 APPL1Q9UKG1 709 aa12.28□□□□□ -0.44
SHMT2-214ENST00000554604 TRHDEQ9UKU6 1024 aa12.28□□□□□ -0.44
SHMT2-214ENST00000554604 RNF215Q9Y6U7 377 aa12.28□□□□□ -0.44
SHMT2-214ENST00000554604 ZFHX4Q86UP3 3567 aa12.28□□□□□ -0.44
SHMT2-214ENST00000554604 BPTFQ12830 3046 aa12.27□□□□□ -0.44
SHMT2-214ENST00000554604 CCDC187A0A096LP49 1063 aa12.27□□□□□ -0.45
SHMT2-214ENST00000554604 D6RAR5 112 aa12.27□□□□□ -0.45
SHMT2-214ENST00000554604 AVILO75366 819 aa12.27□□□□□ -0.45
SHMT2-214ENST00000554604 DXOO77932 396 aaKnown RBP12.27□□□□□ -0.45
SHMT2-214ENST00000554604 FGF1P05230 155 aa12.27□□□□□ -0.45
SHMT2-214ENST00000554604 NFKB1P19838 968 aa12.27□□□□□ -0.45
SHMT2-214ENST00000554604 MAZP56270 477 aaKnown RBP12.27□□□□□ -0.45
SHMT2-214ENST00000554604 PCBP4P57723 403 aaKnown RBP12.27□□□□□ -0.45
SHMT2-214ENST00000554604 ERVPABLB-1P60509 514 aa12.27□□□□□ -0.45
SHMT2-214ENST00000554604 LRP8Q14114 963 aa12.27□□□□□ -0.45
SHMT2-214ENST00000554604 MPP2Q14168 576 aa12.27□□□□□ -0.45
SHMT2-214ENST00000554604 EFTUD2Q15029 972 aaKnown RBP eCLIP12.27□□□□□ -0.455e-8■■■■■ 50.3
SHMT2-214ENST00000554604 PYCR3Q53H96 274 aa12.27□□□□□ -0.45
SHMT2-214ENST00000554604 HENMT1Q5T8I9 393 aaKnown RBP12.27□□□□□ -0.45
SHMT2-214ENST00000554604 STEAP4Q687X5 459 aa12.27□□□□□ -0.45
SHMT2-214ENST00000554604 ITPRIPL1Q6GPH6 555 aa12.27□□□□□ -0.45
SHMT2-214ENST00000554604 PID1Q7Z2X4 250 aa12.27□□□□□ -0.45
SHMT2-214ENST00000554604 SPRED1Q7Z699 444 aa12.27□□□□□ -0.45
SHMT2-214ENST00000554604 CPLX4Q7Z7G2 160 aa12.27□□□□□ -0.45
SHMT2-214ENST00000554604 ARL14Q8N4G2 192 aa12.27□□□□□ -0.45
SHMT2-214ENST00000554604 ANKRD42Q8N9B4 389 aa12.27□□□□□ -0.45
SHMT2-214ENST00000554604 WDR36Q8NI36 951 aaKnown RBP12.27□□□□□ -0.45
SHMT2-214ENST00000554604 DENND1AQ8TEH3 1009 aa12.27□□□□□ -0.45
SHMT2-214ENST00000554604 DYDC1Q8WWB3 177 aa12.27□□□□□ -0.45
SHMT2-214ENST00000554604 CFAP36Q96G28 342 aa12.27□□□□□ -0.45
SHMT2-214ENST00000554604 SCARF2Q96GP6 870 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-214ENST00000554604 COX14Q96I36 57 aa12.27□□□□□ -0.45
SHMT2-214ENST00000554604 MAGEB18Q96M61 343 aa12.27□□□□□ -0.45
SHMT2-214ENST00000554604 TMEM74Q96NL1 305 aa12.27□□□□□ -0.45
SHMT2-214ENST00000554604 SRPK1Q96SB4 655 aaKnown RBP12.27□□□□□ -0.45
SHMT2-214ENST00000554604 NAT9Q9BTE0 207 aa12.27□□□□□ -0.45
SHMT2-214ENST00000554604 ZNF711Q9Y462 761 aa12.27□□□□□ -0.45
SHMT2-214ENST00000554604 A0A1W2PQM1 296 aa12.26□□□□□ -0.45
SHMT2-214ENST00000554604 FADS2P1A8MWK0 482 aa12.26□□□□□ -0.45
SHMT2-214ENST00000554604 FOXO6A8MYZ6 492 aa12.26□□□□□ -0.45
SHMT2-214ENST00000554604 F5H423 210 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-214ENST00000554604 PSMD3O43242 534 aa12.26□□□□□ -0.45
SHMT2-214ENST00000554604 TYROBPO43914 113 aa12.26□□□□□ -0.45
SHMT2-214ENST00000554604 SUN1O94901 812 aa12.26□□□□□ -0.45
SHMT2-214ENST00000554604 ZWINTO95229 277 aa12.26□□□□□ -0.45
SHMT2-214ENST00000554604 SLC25A14O95258 325 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-214ENST00000554604 INHBAP08476 426 aa12.26□□□□□ -0.45
SHMT2-214ENST00000554604 ITPKBP27987 946 aa12.26□□□□□ -0.45
SHMT2-214ENST00000554604 PSMB4P28070 264 aa12.26□□□□□ -0.45
SHMT2-214ENST00000554604 ALDH4A1P30038 563 aa12.26□□□□□ -0.45
SHMT2-214ENST00000554604 INHBCP55103 352 aa12.26□□□□□ -0.45
SHMT2-214ENST00000554604 WNT3AP56704 352 aa12.26□□□□□ -0.45
SHMT2-214ENST00000554604 KBTBD12Q3ZCT8 623 aa12.26□□□□□ -0.45
SHMT2-214ENST00000554604 AMZ1Q400G9 498 aa12.26□□□□□ -0.45
SHMT2-214ENST00000554604 GKAP1Q5VSY0 366 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-214ENST00000554604 UNC5AQ6ZN44 842 aa12.26□□□□□ -0.45
SHMT2-214ENST00000554604 CHST15Q7LFX5 561 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-214ENST00000554604 B3GNT8Q7Z7M8 397 aa12.26□□□□□ -0.45
SHMT2-214ENST00000554604 PDZD3Q86UT5 571 aa12.26□□□□□ -0.45
SHMT2-214ENST00000554604 SLC26A11Q86WA9 606 aa12.26□□□□□ -0.45
SHMT2-214ENST00000554604 KLHDC8BQ8IXV7 354 aa12.26□□□□□ -0.45
SHMT2-214ENST00000554604 LRRC34Q8IZ02 419 aa12.26□□□□□ -0.45
SHMT2-214ENST00000554604 CACNA2D3Q8IZS8 1091 aa12.26□□□□□ -0.45
SHMT2-214ENST00000554604 ZNF248Q8NDW4 579 aa12.26□□□□□ -0.45
SHMT2-214ENST00000554604 GSDMBQ8TAX9 411 aa12.26□□□□□ -0.45
SHMT2-214ENST00000554604 TADA1Q96BN2 335 aa12.26□□□□□ -0.45
SHMT2-214ENST00000554604 LIN37Q96GY3 246 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-214ENST00000554604 NAF1Q96HR8 494 aaKnown RBP12.26□□□□□ -0.45
SHMT2-214ENST00000554604 SEC16BQ96JE7 1060 aa12.26□□□□□ -0.45
SHMT2-214ENST00000554604 ZSCAN5AQ9BUG6 496 aa12.26□□□□□ -0.45
SHMT2-214ENST00000554604 GBA3Q9H227 469 aa12.26□□□□□ -0.45
SHMT2-214ENST00000554604 PLAC1Q9HBJ0 212 aa12.26□□□□□ -0.45
SHMT2-214ENST00000554604 ATXN7L1Q9ULK2 861 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-214ENST00000554604 PRKAB1Q9Y478 270 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms