RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 NRROSQ86YC3 692 aa10.08□□□□□ -0.8
TRAFD1-208ENST00000552890 CILP2Q8IUL8 1156 aa10.08□□□□□ -0.8
TRAFD1-208ENST00000552890 PALM2Q8IXS6 379 aa10.08□□□□□ -0.8
TRAFD1-208ENST00000552890 CFAP206Q8IYR0 622 aa10.08□□□□□ -0.8
TRAFD1-208ENST00000552890 KYQ8NBH2 561 aa10.08□□□□□ -0.8
TRAFD1-208ENST00000552890 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.08□□□□□ -0.8
TRAFD1-208ENST00000552890 ZNF669Q96BR6 464 aaPredicted RBP10.08□□□□□ -0.8
TRAFD1-208ENST00000552890 MFSD3Q96ES6 412 aa10.08□□□□□ -0.8
TRAFD1-208ENST00000552890 ZDHHC12Q96GR4 267 aa10.08□□□□□ -0.8
TRAFD1-208ENST00000552890 CCDC3Q9BQI4 270 aa10.08□□□□□ -0.8
TRAFD1-208ENST00000552890 C20orf96Q9NUD7 363 aaPredicted RBP10.08□□□□□ -0.8
TRAFD1-208ENST00000552890 SPATS2LQ9NUQ6 558 aaKnown RBP10.08□□□□□ -0.8
TRAFD1-208ENST00000552890 KCNK4Q9NYG8 393 aa10.08□□□□□ -0.8
TRAFD1-208ENST00000552890 KCNK6Q9Y257 313 aa10.08□□□□□ -0.8
TRAFD1-208ENST00000552890 MSRB2Q9Y3D2 182 aa10.08□□□□□ -0.8
TRAFD1-208ENST00000552890 ZNF106Q9H2Y7 1883 aaKnown RBP10.08□□□□□ -0.8
TRAFD1-208ENST00000552890 DMXL1Q9Y485 3027 aa10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 SCN8AQ9UQD0 1980 aa10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 TCRBV7S3A2A0A539 114 aa10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 CCDC78A2IDD5 438 aa10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 HGSO14964 777 aaPredicted RBP10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 RAD51CO43502 376 aa10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 MTX2O75431 263 aa10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 FUCA1P04066 466 aa10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 ENO3P13929 434 aaPredicted RBP10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 AK4P27144 223 aaPredicted RBP10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 NMBRP28336 390 aa10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 ATP5DP30049 168 aa10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 PHBP35232 272 aa10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 CCNFP41002 786 aa10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 RPL21P46778 160 aaKnown RBP10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 PPM1FP49593 454 aaPredicted RBP10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 ARSDP51689 593 aa10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 NAB1Q13506 487 aa10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 PTPRCAPQ14761 206 aa10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 CRYMQ14894 314 aa10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 PLEKHS1Q5SXH7 462 aa10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 ZNF470Q6ECI4 717 aa10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 ARMC6Q6NXE6 501 aa10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 C11orf96Q7Z7L8 435 aa10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 KCNMB4Q86W47 210 aa10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 ZNF547Q8IVP9 402 aa10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 IFT20Q8IY31 132 aa10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 PIANPQ8IYJ0 282 aa10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 NAGSQ8N159 534 aa10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 DCBLD1Q8N8Z6 715 aa10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 EIF1ADQ8N9N8 165 aaKnown RBP10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 CCDC74AQ96AQ1 378 aa10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 RAB11FIP5Q9BXF6 653 aa10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 TRIM31Q9BZY9 425 aa10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 B3GNT4Q9C0J1 378 aa10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 NRSN2Q9GZP1 204 aa10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 ZMYND15Q9H091 742 aa10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 LRRN3Q9H3W5 708 aa10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 PPANQ9NQ55 473 aaKnown RBP10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 TBC1D29Q9UFV1 150 aa10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 TMPRSS11EQ9UL52 423 aa10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 PNMA8BQ9ULN7 279 aaPredicted RBP10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 DNAJC16Q9Y2G8 782 aa10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 SNX24Q9Y343 169 aa10.07□□□□□ -0.8
TRAFD1-208ENST00000552890 ARHGEF17Q96PE2 2063 aaPredicted RBP10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 LRP4O75096 1905 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 A6NCN8 305 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 PABPN1LA6NDY0 278 aaKnown RBP10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 PRR19A6NJB7 356 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 ZNF839A8K0R7 811 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 E7ESA3 106 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 GIPC1O14908 333 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 ZNF500O60304 480 aaPredicted RBP10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 AVILO75366 819 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 MT-CO3P00414 261 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 CBSLP0DN79 551 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 AMD1P17707 334 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 CD9P21926 228 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 MCM3P25205 808 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 ALDH4A1P30038 563 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 CCKBRP32239 447 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 CBSP35520 551 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 ARCN1P48444 511 aaKnown RBP10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 RGS4P49798 205 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 CRADDP78560 199 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 DHX9Q08211 1270 aaKnown RBP10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 C2orf54Q08AI8 447 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 FOXC1Q12948 553 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 PDIA2Q13087 525 aaKnown RBP10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 PRKAA1Q13131 559 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 DNAJC3Q13217 504 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 SLMAPQ14BN4 828 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 NAA25Q14CX7 972 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 CCDC157Q569K6 752 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 TMEM164Q5U3C3 297 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 GUSBP11Q6P575 273 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 DHRS13Q6UX07 377 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 UNC5DQ6UXZ4 953 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 TMEM26Q6ZUK4 368 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 DET1Q7L5Y6 550 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 SPRED1Q7Z699 444 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 CCDC91Q7Z6B0 441 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 SLCO6A1Q86UG4 719 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms