RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 PPM1JQ5JR12 505 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 DCST1Q5T197 706 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 HECTD3Q5T447 861 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 ZNF697Q5TEC3 545 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 ZDHHC20Q5W0Z9 365 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 PLCZ1Q86YW0 608 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 MMAAQ8IVH4 418 aaKnown RBP12.65□□□□□ -0.38
PTCH1-212ENST00000546744 ZC3H3Q8IXZ2 948 aaKnown RBP12.65□□□□□ -0.38
PTCH1-212ENST00000546744 LINGO1Q96FE5 620 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 TMEM209Q96SK2 561 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 TMEM246Q9BRR3 403 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 RPF2Q9H7B2 306 aaKnown RBP12.65□□□□□ -0.38
PTCH1-212ENST00000546744 MTMR10Q9NXD2 777 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 RNF6Q9Y252 685 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 PCDHB5Q9Y5E4 795 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 ANKDD1BA6NHY2 528 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 CBX4O00257 560 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 PDCD5O14737 125 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 GABRDO14764 452 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 RASAL1O95294 804 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 SRPRAP08240 638 aaKnown RBP12.65□□□□□ -0.38
PTCH1-212ENST00000546744 ARSFP54793 590 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 RPL19P84098 196 aaKnown RBP12.65□□□□□ -0.38
PTCH1-212ENST00000546744 TLR1Q15399 786 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 HSDL1Q3SXM5 330 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 SHQ1Q6PI26 577 aaKnown RBP12.65□□□□□ -0.38
PTCH1-212ENST00000546744 GPR65Q8IYL9 337 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 NATD1Q8N6N6 113 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 ZNF431Q8TF32 576 aaPredicted RBP12.65□□□□□ -0.38
PTCH1-212ENST00000546744 ZBTB45Q96K62 511 aaPredicted RBP12.65□□□□□ -0.38
PTCH1-212ENST00000546744 TRNT1Q96Q11 434 aaKnown RBP12.65□□□□□ -0.38
PTCH1-212ENST00000546744 C12orf65Q9H3J6 166 aaKnown RBP12.65□□□□□ -0.38
PTCH1-212ENST00000546744 GPN3Q9UHW5 284 aaPredicted RBP12.65□□□□□ -0.38
PTCH1-212ENST00000546744 ST14Q9Y5Y6 855 aa12.65□□□□□ -0.38
PTCH1-212ENST00000546744 A0A1W2PP18 115 aa12.65□□□□□ -0.39
PTCH1-212ENST00000546744 E7ESA3 106 aa12.65□□□□□ -0.39
PTCH1-212ENST00000546744 H0Y858 1186 aa12.65□□□□□ -0.39
PTCH1-212ENST00000546744 PLD2O14939 933 aa12.65□□□□□ -0.39
PTCH1-212ENST00000546744 MAFO75444 373 aaPredicted RBP12.65□□□□□ -0.39
PTCH1-212ENST00000546744 RSL1D1O76021 490 aaKnown RBP12.65□□□□□ -0.39
PTCH1-212ENST00000546744 APOC1P02654 83 aa12.65□□□□□ -0.39
PTCH1-212ENST00000546744 RLN1P04808 185 aa12.65□□□□□ -0.39
PTCH1-212ENST00000546744 ACADLP28330 430 aa12.65□□□□□ -0.39
PTCH1-212ENST00000546744 SERPINA4P29622 427 aa12.65□□□□□ -0.39
PTCH1-212ENST00000546744 ATP6AP1Q15904 470 aa12.65□□□□□ -0.39
PTCH1-212ENST00000546744 DACT2Q5SW24 774 aa12.65□□□□□ -0.39
PTCH1-212ENST00000546744 MBLAC2Q68D91 279 aa12.65□□□□□ -0.39
PTCH1-212ENST00000546744 SLC25A24Q6NUK1 477 aa12.65□□□□□ -0.39
PTCH1-212ENST00000546744 LINC00299Q6ZSB3 139 aa12.65□□□□□ -0.39
PTCH1-212ENST00000546744 TMEM17Q86X19 198 aa12.65□□□□□ -0.39
PTCH1-212ENST00000546744 CHPFQ8IZ52 775 aa12.65□□□□□ -0.39
PTCH1-212ENST00000546744 SLC38A4Q969I6 547 aa12.65□□□□□ -0.39
PTCH1-212ENST00000546744 ELMO3Q96BJ8 720 aa12.65□□□□□ -0.39
PTCH1-212ENST00000546744 TXLNGYQ9BZA5 131 aa12.65□□□□□ -0.39
PTCH1-212ENST00000546744 PDGFDQ9GZP0 370 aaPredicted RBP12.65□□□□□ -0.39
PTCH1-212ENST00000546744 PCDHAC1Q9H158 963 aa12.65□□□□□ -0.39
PTCH1-212ENST00000546744 C1orf109Q9NX04 203 aa12.65□□□□□ -0.39
PTCH1-212ENST00000546744 CNTN3Q9P232 1028 aa12.65□□□□□ -0.39
PTCH1-212ENST00000546744 NCKAP1Q9Y2A7 1128 aa12.65□□□□□ -0.39
PTCH1-212ENST00000546744 IFT52Q9Y366 437 aa12.65□□□□□ -0.39
PTCH1-212ENST00000546744 PCDHGB1Q9Y5G3 927 aa12.65□□□□□ -0.39
PTCH1-212ENST00000546744 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.64□□□□□ -0.39
PTCH1-212ENST00000546744 GSTM2P28161 218 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 CDH5P33151 784 aaPredicted RBP12.64□□□□□ -0.39
PTCH1-212ENST00000546744 ABL2P42684 1182 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 GSK3BP49841 420 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 KCNJ11Q14654 390 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 OLFML2AQ68BL7 652 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 USP45Q70EL2 814 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 EDEM1Q92611 657 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 TMBIM1Q969X1 311 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 PPCDCQ96CD2 204 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 GFM1Q96RP9 751 aaKnown RBP12.64□□□□□ -0.39
PTCH1-212ENST00000546744 ABCB9Q9NP78 766 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 C14orf105Q9NVL8 296 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 MBL2P11226 248 aaPredicted RBP12.64□□□□□ -0.39
PTCH1-212ENST00000546744 MYF6P23409 242 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 YBEYP58557 167 aaPredicted RBP12.64□□□□□ -0.39
PTCH1-212ENST00000546744 RHBDL3P58872 404 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 EVX2Q03828 476 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 NFATC3Q12968 1075 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 TMEM132BQ14DG7 1078 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 CERCAMQ5T4B2 595 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 OR2T5Q6IEZ7 315 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 PAOXQ6QHF9 649 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 OR2T29Q8NH02 315 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 TRPM4Q8TD43 1214 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 ANKRD60Q9BZ19 345 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 XKR8Q9H6D3 395 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 THUMPD1Q9NXG2 353 aaKnown RBP12.64□□□□□ -0.39
PTCH1-212ENST00000546744 KANSL3Q9P2N6 904 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 DYNC1LI2O43237 492 aaPredicted RBP12.64□□□□□ -0.39
PTCH1-212ENST00000546744 CHRNA1P02708 482 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 MATN1P21941 496 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 DNAJB13P59910 316 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 GBE1Q04446 702 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 ECM1Q16610 540 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 BEND5Q7L4P6 421 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 SYVN1Q86TM6 617 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 PHC2Q8IXK0 858 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms