RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 ALG9Q9H6U8 611 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 POLR1BQ9H9Y6 1135 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 SP110Q9HB58 689 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 CYP4F12Q9HCS2 524 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 HMG20AQ9NP66 347 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 MID1IP1Q9NPA3 183 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 PRDM5Q9NQX1 630 aaPredicted RBP6.4□□□□□ -1.38
SNHG1-225ENST00000545920 CATSPERZQ9NTU4 200 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 ATAD3AQ9NVI7 634 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 ASIC5Q9NY37 505 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 SLC2A6Q9UGQ3 507 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 GJD2Q9UKL4 321 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 OAZ3Q9UMX2 235 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 PCDHGB4Q9UN71 923 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 AURKCQ9UQB9 309 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 ERVW-1Q9UQF0 538 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 SCML2Q9UQR0 700 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 MSRB2Q9Y3D2 182 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 NAALAD2Q9Y3Q0 740 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 PCDHGB5Q9Y5G0 923 aa6.4□□□□□ -1.38
SNHG1-225ENST00000545920 MRPL42Q9Y6G3 142 aaKnown RBP6.4□□□□□ -1.38
SNHG1-225ENST00000545920 OAS3Q9Y6K5 1087 aaKnown RBP6.4□□□□□ -1.38
SNHG1-225ENST00000545920 BRCA1P38398 1863 aaKnown RBP6.4□□□□□ -1.39
SNHG1-225ENST00000545920 SCN1AP35498 2009 aa6.4□□□□□ -1.39
SNHG1-225ENST00000545920 MGAMO43451 1857 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 PDCD11Q14690 1871 aaKnown RBP6.39□□□□□ -1.39
SNHG1-225ENST00000545920 NEMP2A6NFY4 417 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 TTC36A6NLP5 189 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 DRGXA6NNA5 263 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 GOLGA8TH3BQL2 631 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 UBFD1O14562 309 aaKnown RBP6.39□□□□□ -1.39
SNHG1-225ENST00000545920 EI24O14681 340 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 AREL1O15033 823 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 SLC22A1O15245 554 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 INPP4BO15327 924 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 CD3EAPO15446 510 aaKnown RBP6.39□□□□□ -1.39
SNHG1-225ENST00000545920 HCRTO43612 131 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 LDB2O43679 373 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 TBC1D4O60343 1298 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 MGEA5O60502 916 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 COQ9O75208 318 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 WDR47O94967 919 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 NDST3O95803 873 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 B3GALT4O96024 378 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 RETP07949 1114 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 ANXA6P08133 673 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 MTHFD2P13995 350 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 JAK1P23458 1154 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 YWHAQP27348 245 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 MAP4P27816 1152 aaKnown RBP6.39□□□□□ -1.39
SNHG1-225ENST00000545920 RYKP34925 604 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 MSX2P35548 267 aaPredicted RBP6.39□□□□□ -1.39
SNHG1-225ENST00000545920 MAGEA11P43364 429 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 GIPRP48546 466 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 ENTPD1P49961 510 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 SCNN1BP51168 640 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 POLR2JP52435 117 aaKnown RBP6.39□□□□□ -1.39
SNHG1-225ENST00000545920 STC1P52823 247 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 RAD23AP54725 363 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 ARSFP54793 590 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 CXCR4P61073 352 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 CSNK2BP67870 215 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 MRPS6P82932 125 aaKnown RBP6.39□□□□□ -1.39
SNHG1-225ENST00000545920 MVKQ03426 396 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 CHRNB3Q05901 458 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 RING1Q06587 406 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 SMARCB1Q12824 385 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 ZNF460Q14592 562 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 PCSK7Q16549 785 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 NFE2Q16621 373 aaPredicted RBP6.39□□□□□ -1.39
SNHG1-225ENST00000545920 PPP1R3AQ16821 1122 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 UPP1Q16831 310 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 GEN1Q17RS7 908 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 FAM110CQ1W6H9 321 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 RGS21Q2M5E4 152 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 VPS26BQ4G0F5 336 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 GPR158Q5T848 1215 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 C16orf87Q6PH81 154 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 DCDC5Q6ZRR9 648 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 MSANTD1Q6ZTZ1 278 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 KCTD8Q6ZWB6 473 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 GPRIN1Q7Z2K8 1008 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 PLEKHH3Q7Z736 793 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 ZDHHC13Q8IUH4 622 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 SPPL2CQ8IUH8 684 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 ADHFE1Q8IWW8 467 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 RIMKLAQ8IXN7 391 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 ELMOD1Q8N336 334 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 GALNT6Q8NCL4 622 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 SETD9Q8NE22 299 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 OR6P1Q8NGX9 317 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 OR4L1Q8NH43 312 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 ABTB1Q969K4 478 aaPredicted RBP6.39□□□□□ -1.39
SNHG1-225ENST00000545920 ISG20Q96AZ6 181 aaKnown RBP6.39□□□□□ -1.39
SNHG1-225ENST00000545920 TMIGD2Q96BF3 282 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 EFHD2Q96C19 240 aaPredicted RBP6.39□□□□□ -1.39
SNHG1-225ENST00000545920 ZNF837Q96EG3 531 aaPredicted RBP6.39□□□□□ -1.39
SNHG1-225ENST00000545920 PHF21BQ96EK2 531 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 PPP3R2Q96LZ3 170 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 ZNF512Q96ME7 567 aaPredicted RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms