RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 DBX2Q6ZNG2 339 aa14.22□□□□□ -0.13
TNFRSF1A-216ENST00000543995 GALNT7Q86SF2 657 aa14.22□□□□□ -0.13
TNFRSF1A-216ENST00000543995 OR4C6Q8NH72 309 aa14.22□□□□□ -0.13
TNFRSF1A-216ENST00000543995 UHMK1Q8TAS1 419 aaKnown RBP14.22□□□□□ -0.13
TNFRSF1A-216ENST00000543995 HM13Q8TCT9 377 aa14.22□□□□□ -0.13
TNFRSF1A-216ENST00000543995 RHBDD1Q8TEB9 315 aa14.22□□□□□ -0.13
TNFRSF1A-216ENST00000543995 ZDHHC1Q8WTX9 485 aa14.22□□□□□ -0.13
TNFRSF1A-216ENST00000543995 UBLCP1Q8WVY7 318 aaPredicted RBP14.22□□□□□ -0.13
TNFRSF1A-216ENST00000543995 FAM136AQ96C01 138 aa14.22□□□□□ -0.13
TNFRSF1A-216ENST00000543995 ATXN7L3BQ96GX2 97 aa14.22□□□□□ -0.13
TNFRSF1A-216ENST00000543995 SARS2Q9NP81 518 aaKnown RBP14.22□□□□□ -0.13
TNFRSF1A-216ENST00000543995 SPATS2LQ9NUQ6 558 aaKnown RBP14.22□□□□□ -0.13
TNFRSF1A-216ENST00000543995 RABGEF1Q9UJ41 708 aa14.22□□□□□ -0.13
TNFRSF1A-216ENST00000543995 BTBD3Q9Y2F9 522 aa14.22□□□□□ -0.13
TNFRSF1A-216ENST00000543995 COMMD10Q9Y6G5 202 aa14.22□□□□□ -0.13
TNFRSF1A-216ENST00000543995 ARHGEF17Q96PE2 2063 aaPredicted RBP14.21□□□□□ -0.13
TNFRSF1A-216ENST00000543995 ASCC3Q8N3C0 2202 aaKnown RBP14.21□□□□□ -0.13
TNFRSF1A-216ENST00000543995 C17orf113A0A1B0GUU1 675 aa14.21□□□□□ -0.13
TNFRSF1A-216ENST00000543995 PDZK1P1A8MUH7 402 aa14.21□□□□□ -0.13
TNFRSF1A-216ENST00000543995 TRIM38O00635 465 aa14.21□□□□□ -0.13
TNFRSF1A-216ENST00000543995 RIPK2O43353 540 aa14.21□□□□□ -0.13
TNFRSF1A-216ENST00000543995 SIGLEC6O43699 453 aa14.21□□□□□ -0.13
TNFRSF1A-216ENST00000543995 SH3BP5O60239 455 aa14.21□□□□□ -0.13
TNFRSF1A-216ENST00000543995 NIPSNAP2O75323 286 aa14.21□□□□□ -0.13
TNFRSF1A-216ENST00000543995 GIMD1P0DJR0 217 aa14.21□□□□□ -0.13
TNFRSF1A-216ENST00000543995 RPL10P27635 214 aaKnown RBP14.21□□□□□ -0.13
TNFRSF1A-216ENST00000543995 GABRB3P28472 473 aa14.21□□□□□ -0.13
TNFRSF1A-216ENST00000543995 ABCG1P45844 678 aa14.21□□□□□ -0.13
TNFRSF1A-216ENST00000543995 CLCNKAP51800 687 aa14.21□□□□□ -0.13
TNFRSF1A-216ENST00000543995 CSE1LP55060 971 aaKnown RBP14.21□□□□□ -0.13
TNFRSF1A-216ENST00000543995 DMPKQ09013 629 aa14.21□□□□□ -0.13
TNFRSF1A-216ENST00000543995 EFTUD2Q15029 972 aaKnown RBP eCLIP14.21□□□□□ -0.136e-7■■■■■ 53.3
TNFRSF1A-216ENST00000543995 C6orf132Q5T0Z8 1188 aa14.21□□□□□ -0.13
TNFRSF1A-216ENST00000543995 ZCCHC8Q6NZY4 707 aaKnown RBP14.21□□□□□ -0.13
TNFRSF1A-216ENST00000543995 NAPRTQ6XQN6 538 aa14.21□□□□□ -0.13
TNFRSF1A-216ENST00000543995 LKAAEAR1Q8TD35 194 aa14.21□□□□□ -0.13
TNFRSF1A-216ENST00000543995 GLMNQ92990 594 aa14.21□□□□□ -0.13
TNFRSF1A-216ENST00000543995 MRRFQ96E11 262 aaKnown RBP14.21□□□□□ -0.13
TNFRSF1A-216ENST00000543995 CYTH2Q99418 400 aa14.21□□□□□ -0.13
TNFRSF1A-216ENST00000543995 NDNQ99608 321 aa14.21□□□□□ -0.13
TNFRSF1A-216ENST00000543995 CPNE1Q99829 537 aa14.21□□□□□ -0.13
TNFRSF1A-216ENST00000543995 TXLNGYQ9BZA5 131 aa14.21□□□□□ -0.13
TNFRSF1A-216ENST00000543995 PRDM8Q9NQV8 689 aa14.21□□□□□ -0.13
TNFRSF1A-216ENST00000543995 GULP1Q9UBP9 304 aa14.21□□□□□ -0.13
TNFRSF1A-216ENST00000543995 TBC1D29Q9UFV1 150 aa14.21□□□□□ -0.13
TNFRSF1A-216ENST00000543995 CDV3Q9UKY7 258 aaKnown RBP14.21□□□□□ -0.13
TNFRSF1A-216ENST00000543995 PSMD13Q9UNM6 376 aa14.21□□□□□ -0.13
TNFRSF1A-216ENST00000543995 ZFHX2Q9C0A1 2572 aaPredicted RBP14.21□□□□□ -0.13
TNFRSF1A-216ENST00000543995 EP300Q09472 2414 aaPredicted RBP14.21□□□□□ -0.13
TNFRSF1A-216ENST00000543995 SLC2A4P14672 509 aa14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 GP5P40197 560 aa14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 NAB1Q13506 487 aa14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 TMED2Q15363 201 aa14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 METRNLQ641Q3 311 aa14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 ZNF549Q6P9A3 640 aa14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 FAM83HQ6ZRV2 1179 aaPredicted RBP14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 OTOAQ7RTW8 1153 aa14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 GPATCH11Q8N954 259 aa14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 TMEM159Q96B96 161 aa14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 CAMK1GQ96NX5 476 aa14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 AARSD1Q9BTE6 412 aaKnown RBP14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 ACSS3Q9H6R3 686 aa14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 COG4Q9H9E3 785 aa14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 RAB21Q9UL25 225 aa14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 FAM186AA6NE01 2351 aa14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 TRBV23OR9-2A0A075B6M9 112 aa14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 LIN7AO14910 233 aaPredicted RBP14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 KPNA5O15131 536 aa14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 VPS26AO75436 327 aa14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 C1QAP02745 245 aa14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 APOA4P06727 396 aa14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 SLC35G4P0C7Q5 338 aa14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 F3P13726 295 aa14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 CCR7P32248 378 aa14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 HALP42357 657 aa14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 HSPA14Q0VDF9 509 aa14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 BIRC2Q13490 618 aa14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 SLC29A2Q14542 456 aa14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 UAP1Q16222 522 aaPredicted RBP14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 KLHL38Q2WGJ6 581 aa14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 EMBQ6PCB8 327 aa14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 ZC3HC1Q86WB0 502 aaKnown RBP14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 LILRA3Q8N6C8 439 aaPredicted RBP14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 ARL10Q8N8L6 244 aa14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 AENQ8WTP8 325 aaKnown RBP14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 ASZ1Q8WWH4 475 aa14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 CNDP2Q96KP4 475 aaKnown RBP14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 APOLD1Q96LR9 279 aa14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 FUT8Q9BYC5 575 aa14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 RHOJQ9H4E5 214 aa14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 FTSJ1Q9UET6 329 aa14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 PCOLCE2Q9UKZ9 415 aa14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 ACSL5Q9ULC5 683 aa14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 CORO1CQ9ULV4 474 aaPredicted RBP14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 IKBKGQ9Y6K9 419 aa14.2□□□□□ -0.14
TNFRSF1A-216ENST00000543995 PRR19A6NJB7 356 aa14.19□□□□□ -0.14
TNFRSF1A-216ENST00000543995 POC1B-GALNT4F8VUJ3 575 aa14.19□□□□□ -0.14
TNFRSF1A-216ENST00000543995 FAM155BO75949 473 aa14.19□□□□□ -0.14
TNFRSF1A-216ENST00000543995 LDOC1O95751 146 aaPredicted RBP14.19□□□□□ -0.14
TNFRSF1A-216ENST00000543995 EML2O95834 649 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms