RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 FAM83HQ6ZRV2 1179 aaPredicted RBP17.1■□□□□ 0.33
LTBR-210ENST00000542830 ATG4AQ8WYN0 398 aa17.1■□□□□ 0.33
LTBR-210ENST00000542830 PMEPA1Q969W9 287 aa17.1■□□□□ 0.33
LTBR-210ENST00000542830 ZDHHC12Q96GR4 267 aa17.1■□□□□ 0.33
LTBR-210ENST00000542830 DNAJC1Q96KC8 554 aaKnown RBP17.1■□□□□ 0.33
LTBR-210ENST00000542830 TGM7Q96PF1 710 aa17.1■□□□□ 0.33
LTBR-210ENST00000542830 RAB33BQ9H082 229 aa17.1■□□□□ 0.33
LTBR-210ENST00000542830 NLE1Q9NVX2 485 aaPredicted RBP17.1■□□□□ 0.33
LTBR-210ENST00000542830 EPHA6Q9UF33 1036 aa17.1■□□□□ 0.33
LTBR-210ENST00000542830 SDK2Q58EX2 2172 aa17.09■□□□□ 0.33
LTBR-210ENST00000542830 GAS8O95995 478 aa17.09■□□□□ 0.33
LTBR-210ENST00000542830 IFNB1P01574 187 aa17.09■□□□□ 0.33
LTBR-210ENST00000542830 MTHFD1P11586 935 aaKnown RBP17.09■□□□□ 0.33
LTBR-210ENST00000542830 ATP1B2P14415 290 aaPredicted RBP17.09■□□□□ 0.33
LTBR-210ENST00000542830 PRLHRP49683 370 aa17.09■□□□□ 0.33
LTBR-210ENST00000542830 SEPT6Q14141 434 aa17.09■□□□□ 0.33
LTBR-210ENST00000542830 POU6F1Q14863 301 aa17.09■□□□□ 0.33
LTBR-210ENST00000542830 PRSS42Q7Z5A4 293 aa17.09■□□□□ 0.33
LTBR-210ENST00000542830 IL22RA1Q8N6P7 574 aa17.09■□□□□ 0.33
LTBR-210ENST00000542830 ZFPM2Q8WW38 1151 aa17.09■□□□□ 0.33
LTBR-210ENST00000542830 TTC9Q92623 222 aa17.09■□□□□ 0.33
LTBR-210ENST00000542830 RSC1A1Q92681 617 aa17.09■□□□□ 0.33
LTBR-210ENST00000542830 CCM2Q9BSQ5 444 aa17.09■□□□□ 0.33
LTBR-210ENST00000542830 ZNF768Q9H5H4 540 aaKnown RBP17.09■□□□□ 0.33
LTBR-210ENST00000542830 VPS37BQ9H9H4 285 aa17.09■□□□□ 0.33
LTBR-210ENST00000542830 ZDHHC3Q9NYG2 299 aa17.09■□□□□ 0.33
LTBR-210ENST00000542830 PSMD13Q9UNM6 376 aa17.09■□□□□ 0.33
LTBR-210ENST00000542830 ZNF148Q9UQR1 794 aa17.09■□□□□ 0.33
LTBR-210ENST00000542830 SMG1Q96Q15 3661 aaKnown RBP17.09■□□□□ 0.33
LTBR-210ENST00000542830 IGLV3-16A0A075B6K0 115 aa17.08■□□□□ 0.32
LTBR-210ENST00000542830 TRBV5-4A0A0C4DH59 114 aa17.08■□□□□ 0.32
LTBR-210ENST00000542830 C17orf113A0A1B0GUU1 675 aa17.08■□□□□ 0.32
LTBR-210ENST00000542830 POLR1CO15160 346 aaPredicted RBP17.08■□□□□ 0.32
LTBR-210ENST00000542830 RASSF9O75901 435 aa17.08■□□□□ 0.32
LTBR-210ENST00000542830 SLC35G4P0C7Q5 338 aa17.08■□□□□ 0.32
LTBR-210ENST00000542830 TPH1P17752 444 aa17.08■□□□□ 0.32
LTBR-210ENST00000542830 C19orf57Q0VDD7 668 aa17.08■□□□□ 0.32
LTBR-210ENST00000542830 CDH17Q12864 832 aa17.08■□□□□ 0.32
LTBR-210ENST00000542830 SRSF6Q13247 344 aaKnown RBP17.08■□□□□ 0.32
LTBR-210ENST00000542830 LAMB3Q13751 1172 aa17.08■□□□□ 0.32
LTBR-210ENST00000542830 COL9A2Q14055 689 aaPredicted RBP17.08■□□□□ 0.32
LTBR-210ENST00000542830 SKIDA1Q1XH10 827 aa17.08■□□□□ 0.32
LTBR-210ENST00000542830 ZRANB3Q5FWF4 1079 aa17.08■□□□□ 0.32
LTBR-210ENST00000542830 KIAA1614Q5VZ46 1190 aa17.08■□□□□ 0.32
LTBR-210ENST00000542830 PCSK4Q6UW60 755 aa17.08■□□□□ 0.32
LTBR-210ENST00000542830 VASH2Q86V25 355 aa17.08■□□□□ 0.32
LTBR-210ENST00000542830 LRRC8AQ8IWT6 810 aa17.08■□□□□ 0.32
LTBR-210ENST00000542830 GPR150Q8NGU9 434 aa17.08■□□□□ 0.32
LTBR-210ENST00000542830 HM13Q8TCT9 377 aa17.08■□□□□ 0.32
LTBR-210ENST00000542830 NKD1Q969G9 470 aa17.08■□□□□ 0.32
LTBR-210ENST00000542830 CDKN2AIPNLQ96HQ2 116 aa17.08■□□□□ 0.32
LTBR-210ENST00000542830 C12orf66Q96MD2 445 aa17.08■□□□□ 0.32
LTBR-210ENST00000542830 WWP1Q9H0M0 922 aa17.08■□□□□ 0.32
LTBR-210ENST00000542830 LZTFL1Q9NQ48 299 aa17.08■□□□□ 0.32
LTBR-210ENST00000542830 IMP3Q9NV31 184 aaKnown RBP17.08■□□□□ 0.32
LTBR-210ENST00000542830 SIDT1Q9NXL6 827 aaKnown RBP17.08■□□□□ 0.32
LTBR-210ENST00000542830 E7EVH7 732 aa17.07■□□□□ 0.32
LTBR-210ENST00000542830 CCL22O00626 93 aa17.07■□□□□ 0.32
LTBR-210ENST00000542830 SGTAO43765 313 aa17.07■□□□□ 0.32
LTBR-210ENST00000542830 RAD1O60671 282 aa17.07■□□□□ 0.32
LTBR-210ENST00000542830 PSMA3P25788 255 aa17.07■□□□□ 0.32
LTBR-210ENST00000542830 ACRV1P26436 265 aa17.07■□□□□ 0.32
LTBR-210ENST00000542830 LMAN1P49257 510 aa17.07■□□□□ 0.32
LTBR-210ENST00000542830 CACNG1Q06432 222 aa17.07■□□□□ 0.32
LTBR-210ENST00000542830 PLCL1Q15111 1095 aa17.07■□□□□ 0.32
LTBR-210ENST00000542830 IRGCQ6NXR0 463 aa17.07■□□□□ 0.32
LTBR-210ENST00000542830 CYB5D1Q6P9G0 228 aa17.07■□□□□ 0.32
LTBR-210ENST00000542830 TAS2R42Q7RTR8 314 aa17.07■□□□□ 0.32
LTBR-210ENST00000542830 CFAP206Q8IYR0 622 aa17.07■□□□□ 0.32
LTBR-210ENST00000542830 CACNA2D3Q8IZS8 1091 aa17.07■□□□□ 0.32
LTBR-210ENST00000542830 TAB3Q8N5C8 712 aaPredicted RBP17.07■□□□□ 0.32
LTBR-210ENST00000542830 CCDC89Q8N998 374 aa17.07■□□□□ 0.32
LTBR-210ENST00000542830 DNAAF3Q8N9W5 541 aa17.07■□□□□ 0.32
LTBR-210ENST00000542830 TRIM58Q8NG06 486 aa17.07■□□□□ 0.32
LTBR-210ENST00000542830 MAIP1Q8WWC4 291 aa17.07■□□□□ 0.32
LTBR-210ENST00000542830 C1orf54Q8WWF1 131 aa17.07■□□□□ 0.32
LTBR-210ENST00000542830 JPH3Q8WXH2 748 aaPredicted RBP17.07■□□□□ 0.32
LTBR-210ENST00000542830 CTRCQ99895 268 aa17.07■□□□□ 0.32
LTBR-210ENST00000542830 TRIT1Q9H3H1 467 aaKnown RBP17.07■□□□□ 0.32
LTBR-210ENST00000542830 FAM96AQ9H5X1 160 aa17.07■□□□□ 0.32
LTBR-210ENST00000542830 ETNK1Q9HBU6 452 aa17.07■□□□□ 0.32
LTBR-210ENST00000542830 PAK5Q9P286 719 aa17.07■□□□□ 0.32
LTBR-210ENST00000542830 PILRAQ9UKJ1 303 aa17.07■□□□□ 0.32
LTBR-210ENST00000542830 ZKSCAN5Q9Y2L8 839 aa17.07■□□□□ 0.32
LTBR-210ENST00000542830 PCDHGA4Q9Y5G9 962 aa17.07■□□□□ 0.32
LTBR-210ENST00000542830 HEBP2Q9Y5Z4 205 aa17.07■□□□□ 0.32
LTBR-210ENST00000542830 COLEC10Q9Y6Z7 277 aa17.07■□□□□ 0.32
LTBR-210ENST00000542830 FASNP49327 2511 aaKnown RBP17.06■□□□□ 0.32
LTBR-210ENST00000542830 MROH6A6NGR9 719 aa17.06■□□□□ 0.32
LTBR-210ENST00000542830 SUN1O94901 812 aa17.06■□□□□ 0.32
LTBR-210ENST00000542830 ITGB2P05107 769 aa17.06■□□□□ 0.32
LTBR-210ENST00000542830 GSTM1P09488 218 aa17.06■□□□□ 0.32
LTBR-210ENST00000542830 MAP4P27816 1152 aaKnown RBP17.06■□□□□ 0.32
LTBR-210ENST00000542830 NDUFS1P28331 727 aa17.06■□□□□ 0.32
LTBR-210ENST00000542830 LEPRP48357 1165 aaKnown RBP17.06■□□□□ 0.32
LTBR-210ENST00000542830 GSTM4Q03013 218 aa17.06■□□□□ 0.32
LTBR-210ENST00000542830 CCNG2Q16589 344 aa17.06■□□□□ 0.32
LTBR-210ENST00000542830 CACHD1Q5VU97 1274 aa17.06■□□□□ 0.32
LTBR-210ENST00000542830 ZNF449Q6P9G9 518 aa17.06■□□□□ 0.32
LTBR-210ENST00000542830 XKR5Q6UX68 686 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms