RNA–Protein interactions for RNA: ENST00000540326.5

NEK6-213, Transcript of NIMA related kinase 6, humanhuman

TSL 1 (best) BASIC

Gene NEK6, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-213ENST00000540326 RIMKLAQ8IXN7 391 aa12.26□□□□□ -0.45
NEK6-213ENST00000540326 CLEC4FQ8N1N0 589 aa12.26□□□□□ -0.45
NEK6-213ENST00000540326 FNDC8Q8TC99 324 aa12.26□□□□□ -0.45
NEK6-213ENST00000540326 MIPOL1Q8TD10 442 aa12.26□□□□□ -0.45
NEK6-213ENST00000540326 KCNJ9Q92806 393 aa12.26□□□□□ -0.45
NEK6-213ENST00000540326 GFM2Q969S9 779 aaKnown RBP12.26□□□□□ -0.45
NEK6-213ENST00000540326 CGREF1Q99674 301 aa12.26□□□□□ -0.45
NEK6-213ENST00000540326 C8orf4Q9NR00 106 aa12.26□□□□□ -0.45
NEK6-213ENST00000540326 VPS9D1Q9Y2B5 631 aa12.26□□□□□ -0.45
NEK6-213ENST00000540326 TDRKHQ9Y2W6 561 aaKnown RBP12.26□□□□□ -0.45
NEK6-213ENST00000540326 ARIH1Q9Y4X5 557 aaPredicted RBP12.26□□□□□ -0.45
NEK6-213ENST00000540326 PCDHGA11Q9Y5H2 935 aa12.26□□□□□ -0.45
NEK6-213ENST00000540326 OR7A17O14581 309 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 LSM1O15116 133 aaKnown RBP12.25□□□□□ -0.45
NEK6-213ENST00000540326 PRAMEF12O95522 483 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 CKBP12277 381 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 CDH1P12830 882 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 DCKP27707 260 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 FLT3LGP49771 235 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 GATMP50440 423 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 CDH4P55283 916 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 TRAF2Q12933 501 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 MRPL58Q14197 206 aaKnown RBP12.25□□□□□ -0.45
NEK6-213ENST00000540326 RTP2Q5QGT7 225 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 CCNYL2Q5T2Q4 361 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 XKR5Q6UX68 686 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 GOLGA7Q7Z5G4 137 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 DPP10Q8N608 796 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 FIG4Q92562 907 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 PLGRKTQ9HBL7 147 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 GKN1Q9NS71 199 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 VAPAQ9P0L0 249 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 MAGEL2Q9UJ55 1249 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 PCDHB3Q9Y5E6 796 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 PFDN6O15212 129 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 KLKB1P03952 638 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 RHOCP08134 193 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 TFPTP0C1Z6 253 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 ATF6P18850 670 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 SHMT2P34897 504 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 GGT5P36269 586 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 ATP5C1P36542 298 aaKnown RBP12.25□□□□□ -0.45
NEK6-213ENST00000540326 CLCN7P51798 805 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 GTF2H2Q13888 395 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 FXNQ16595 210 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 GTF2H2CQ6P1K8 395 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 FBXO30Q8TB52 745 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 SGCDQ92629 289 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 C17orf80Q9BSJ5 609 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 PAIP1Q9H074 479 aaKnown RBP12.25□□□□□ -0.45
NEK6-213ENST00000540326 ING2Q9H160 280 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 NSUN3Q9H649 340 aaKnown RBP12.25□□□□□ -0.45
NEK6-213ENST00000540326 IPPKQ9H8X2 491 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 CARS2Q9HA77 564 aaKnown RBP12.25□□□□□ -0.45
NEK6-213ENST00000540326 DNAAF2Q9NVR5 837 aaKnown RBP12.25□□□□□ -0.45
NEK6-213ENST00000540326 DNMT3LQ9UJW3 386 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 GMEB1Q9Y692 573 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 MANSC4A6NHS7 340 aaPredicted RBP12.25□□□□□ -0.45
NEK6-213ENST00000540326 OR6C75A6NL08 312 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 FFAR3O14843 346 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 GPR42O15529 346 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 DFNA5O60443 496 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 DEAF1O75398 565 aaPredicted RBP12.25□□□□□ -0.45
NEK6-213ENST00000540326 NPPAP01160 153 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 F11P03951 625 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 ZDHHC11BP0C7U3 371 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 MATN1P21941 496 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 MTHFRP42898 656 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 GDF5P43026 501 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 SLC11A2P49281 568 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 HLCSP50747 726 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 RPL38P63173 70 aaKnown RBP12.25□□□□□ -0.45
NEK6-213ENST00000540326 PPP1R8Q12972 351 aaKnown RBP12.25□□□□□ -0.45
NEK6-213ENST00000540326 BNIP3Q12983 259 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 GPR17Q13304 367 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 LAPTM5Q13571 262 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 C5orf22Q49AR2 442 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 ACBD5Q5T8D3 534 aaPredicted RBP12.25□□□□□ -0.45
NEK6-213ENST00000540326 SBSNQ6UWP8 590 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 HS3ST5Q8IZT8 346 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 ZNF420Q8TAQ5 688 aaPredicted RBP12.25□□□□□ -0.45
NEK6-213ENST00000540326 EID2BQ96D98 161 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 ZNF583Q96ND8 569 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 ADGRE3Q9BY15 652 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.25□□□□□ -0.452e-6■■■■□ 25.2
NEK6-213ENST00000540326 ADNPQ9H2P0 1102 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 FANCEQ9HB96 536 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 HEBP1Q9NRV9 189 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 UTS2RQ9UKP6 389 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 CDH7Q9ULB5 785 aa12.25□□□□□ -0.45
NEK6-213ENST00000540326 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.24□□□□□ -0.45
NEK6-213ENST00000540326 SH3PXD2BA1X283 911 aa12.24□□□□□ -0.45
NEK6-213ENST00000540326 SLC38A8A6NNN8 435 aa12.24□□□□□ -0.45
NEK6-213ENST00000540326 ANKRD28O15084 1053 aa12.24□□□□□ -0.45
NEK6-213ENST00000540326 ESR1P03372 595 aa12.24□□□□□ -0.45
NEK6-213ENST00000540326 ALPLP05186 524 aa12.24□□□□□ -0.45
NEK6-213ENST00000540326 ANXA6P08133 673 aa12.24□□□□□ -0.45
NEK6-213ENST00000540326 RAP2AP10114 183 aa12.24□□□□□ -0.45
NEK6-213ENST00000540326 IRF1P10914 325 aa12.24□□□□□ -0.45
NEK6-213ENST00000540326 BMP1P13497 986 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms