RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 SLC45A3Q96JT2 553 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 RTP3Q9BQQ7 232 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 B3GNT5Q9BYG0 378 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 HOXD1Q9GZZ0 328 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 POMKQ9H5K3 350 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 PDZD7Q9H5P4 517 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 GOLGA2P5Q9HBQ8 144 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 ARMC1Q9NVT9 282 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 OXSMQ9NWU1 459 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 NUDT5Q9UKK9 219 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 CNTN6Q9UQ52 1028 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 PSAT1Q9Y617 370 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 PIEZO1Q92508 2521 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 LOC100506127A0A0U1RQW1 187 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 TCAF2A6NFQ2 919 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 MEIS3P2A8K0S8 358 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 C5orf67F2Z3F1 127 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 YES1P07947 543 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 HNRNPA1P09651 372 aaKnown RBP eCLIP8.59□□□□□ -1.03
DDB1-217ENST00000540166 C7P10643 843 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 ASPAP45381 313 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 SLC9A3P48764 834 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 CLCNKBP51801 687 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 PLK1P53350 603 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 KCNMB4Q86W47 210 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 RAB43Q86YS6 212 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 PLD6Q8N2A8 252 aaKnown RBP8.59□□□□□ -1.03
DDB1-217ENST00000540166 TOR1AIP2Q8NFQ8 470 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 PHF21BQ96EK2 531 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 TXNDC15Q96J42 360 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 CNDP2Q96KP4 475 aaKnown RBP8.59□□□□□ -1.03
DDB1-217ENST00000540166 TRMT61BQ9BVS5 477 aaKnown RBP8.59□□□□□ -1.03
DDB1-217ENST00000540166 DUS2Q9NX74 493 aaKnown RBP8.59□□□□□ -1.03
DDB1-217ENST00000540166 NSMCE4AQ9NXX6 385 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 ANKRD6Q9Y2G4 727 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 PCDHB5Q9Y5E4 795 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 PCDHGA7Q9Y5G6 932 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 STYXL1Q9Y6J8 313 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 BCLAF3A2AJT9 711 aaKnown RBP8.59□□□□□ -1.04
DDB1-217ENST00000540166 RNF103O00237 685 aa8.59□□□□□ -1.04
DDB1-217ENST00000540166 TNFRSF21O75509 655 aa8.59□□□□□ -1.04
DDB1-217ENST00000540166 HADHAP40939 763 aa8.59□□□□□ -1.04
DDB1-217ENST00000540166 SULT1E1P49888 294 aa8.59□□□□□ -1.04
DDB1-217ENST00000540166 PTPN5P54829 565 aa8.59□□□□□ -1.04
DDB1-217ENST00000540166 BNC1Q01954 994 aa8.59□□□□□ -1.04
DDB1-217ENST00000540166 SLC6A3Q01959 620 aa8.59□□□□□ -1.04
DDB1-217ENST00000540166 PIGFQ07326 219 aa8.59□□□□□ -1.04
DDB1-217ENST00000540166 SUZ12Q15022 739 aaKnown RBP8.59□□□□□ -1.04
DDB1-217ENST00000540166 ZYG11AQ6WRX3 759 aa8.59□□□□□ -1.04
DDB1-217ENST00000540166 NAPRTQ6XQN6 538 aa8.59□□□□□ -1.04
DDB1-217ENST00000540166 SENP8Q96LD8 212 aa8.59□□□□□ -1.04
DDB1-217ENST00000540166 LRFN3Q9BTN0 628 aa8.59□□□□□ -1.04
DDB1-217ENST00000540166 ACAT2Q9BWD1 397 aa8.59□□□□□ -1.04
DDB1-217ENST00000540166 TOR3AQ9H497 397 aa8.59□□□□□ -1.04
DDB1-217ENST00000540166 CYP3A43Q9HB55 503 aa8.59□□□□□ -1.04
DDB1-217ENST00000540166 INTS10Q9NVR2 710 aaKnown RBP8.59□□□□□ -1.04
DDB1-217ENST00000540166 EHD3Q9NZN3 535 aa8.59□□□□□ -1.04
DDB1-217ENST00000540166 CPSF3Q9UKF6 684 aaKnown RBP8.59□□□□□ -1.04
DDB1-217ENST00000540166 UGT2A1Q9Y4X1 527 aa8.59□□□□□ -1.04
DDB1-217ENST00000540166 IGKV6-21A0A0C4DH24 114 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 TCRBV3S1A0A5B6 114 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 OR6C75A6NL08 312 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 C3orf70A6NLC5 250 aaPredicted RBP8.58□□□□□ -1.04
DDB1-217ENST00000540166 C2CD4BA6NLJ0 364 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 TMEM233B4DJY2 109 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 SYN3O14994 580 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 STX7O15400 261 aaKnown RBP8.58□□□□□ -1.04
DDB1-217ENST00000540166 TPH1P17752 444 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 PSMB4P28070 264 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 GSTM2P28161 218 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 LIMK2P53671 638 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 IRF9Q00978 393 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 TCTN1Q2MV58 587 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 VARS2Q5ST30 1063 aaKnown RBP8.58□□□□□ -1.04
DDB1-217ENST00000540166 P3H2Q8IVL5 708 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 MIER2Q8N344 545 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 ITFG1Q8TB96 612 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 SLC22A17Q8WUG5 538 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 PIK3R3Q92569 461 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 IRF7Q92985 503 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 ZNF689Q96CS4 500 aaPredicted RBP8.58□□□□□ -1.04
DDB1-217ENST00000540166 CCDC126Q96EE4 140 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 RBBP8Q99708 897 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 TTYH2Q9BSA4 534 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 PRKD2Q9BZL6 878 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 RAPGEFL1Q9UHV5 662 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 C3orf18Q9UK00 162 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 VANGL2Q9ULK5 521 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 TIMM22Q9Y584 194 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 A0A0J9YYE9 177 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 C12orf71A8MTZ7 269 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 FAM20BO75063 409 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 CPNE3O75131 537 aaKnown RBP8.58□□□□□ -1.04
DDB1-217ENST00000540166 PIGRP01833 764 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 F7P08709 466 aaPredicted RBP8.58□□□□□ -1.04
DDB1-217ENST00000540166 HOXC8P31273 242 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 CASP3P42574 277 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 DPP6P42658 865 aa8.58□□□□□ -1.04
DDB1-217ENST00000540166 DLX2Q07687 328 aaPredicted RBP8.58□□□□□ -1.04
DDB1-217ENST00000540166 SIGLEC14Q08ET2 396 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms