RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 KCNH7Q9NS40 1196 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 CISHQ9NSE2 258 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 NPAP1Q9NZP6 1156 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 MUTYHQ9UIF7 546 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.56□□□□□ -0.72
RTN3-208ENST00000537981 CNTN6Q9UQ52 1028 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 U3KQV3 271 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 MN1Q10571 1320 aaPredicted RBP10.56□□□□□ -0.72
RTN3-208ENST00000537981 LOC100506127A0A0U1RQW1 187 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 APOL1O14791 398 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 PGK1P00558 417 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 FTH1P02794 183 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 ADORA3P0DMS8 318 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 MAPTP10636 758 aaKnown RBP10.56□□□□□ -0.72
RTN3-208ENST00000537981 HSD17B1P14061 328 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 PSMB4P28070 264 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 CRISP3P54108 245 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 CNTNAP1P78357 1384 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 LIPEQ05469 1076 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 CDK5R2Q13319 367 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 GRB7Q14451 532 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 BAK1Q16611 211 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 KIF19Q2TAC6 998 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 PPP1R26Q5T8A7 1209 aaPredicted RBP10.56□□□□□ -0.72
RTN3-208ENST00000537981 GRTP1Q5TC63 336 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 METTL2BQ6P1Q9 378 aaKnown RBP10.56□□□□□ -0.72
RTN3-208ENST00000537981 LIPIQ6XZB0 460 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 PRSS48Q7RTY5 328 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 PHC2Q8IXK0 858 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 MICU2Q8IYU8 434 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 LINC00518Q8N0U6 118 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 ZFAND1Q8TCF1 268 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 BPIFB1Q8TDL5 484 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 EMID1Q96A84 441 aaPredicted RBP10.56□□□□□ -0.72
RTN3-208ENST00000537981 TMEM125Q96AQ2 219 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 MCRS1Q96EZ8 462 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 KCNS3Q9BQ31 491 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 LIN7BQ9HAP6 207 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 IARS2Q9NSE4 1012 aaKnown RBP10.56□□□□□ -0.72
RTN3-208ENST00000537981 GABRQQ9UN88 632 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 DIMT1Q9UNQ2 313 aaKnown RBP10.56□□□□□ -0.72
RTN3-208ENST00000537981 BTBD3Q9Y2F9 522 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 KLHL20Q9Y2M5 609 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 PCDHA9Q9Y5H5 950 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 MGAMO43451 1857 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 FAM92AA1XBS5 289 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 ASPDHA6ND91 283 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 EEF2KO00418 725 aaKnown RBP10.55□□□□□ -0.72
RTN3-208ENST00000537981 PI15O43692 258 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 ATG13O75143 517 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 GPIP06744 558 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 CDH5P33151 784 aaPredicted RBP10.55□□□□□ -0.72
RTN3-208ENST00000537981 FCGRTP55899 365 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 GABARAPL2P60520 117 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 IL5RAQ01344 420 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 TOP3AQ13472 1001 aaPredicted RBP10.55□□□□□ -0.72
RTN3-208ENST00000537981 PAGE3Q5JUK9 113 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 RIMKLAQ8IXN7 391 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 OR10Z1Q8NGY1 313 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 SLC16A10Q8TF71 515 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 STYXQ8WUJ0 223 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 RIT1Q92963 219 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 LRRC58Q96CX6 371 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 UROC1Q96N76 676 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 TEKT3Q9BXF9 490 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 VPS33BQ9H267 617 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 EHMT1Q9H9B1 1298 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 INTS7Q9NVH2 962 aaKnown RBP10.55□□□□□ -0.72
RTN3-208ENST00000537981 SPATA6Q9NWH7 488 aaPredicted RBP10.55□□□□□ -0.72
RTN3-208ENST00000537981 SEPT9Q9UHD8 586 aaPredicted RBP10.55□□□□□ -0.72
RTN3-208ENST00000537981 HMX3A6NHT5 357 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 OR5K4A6NMS3 321 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 TOR1AO14656 332 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 NDUFA2O43678 99 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 RECQL5O94762 991 aaPredicted RBP10.55□□□□□ -0.72
RTN3-208ENST00000537981 ANGPTL1O95841 491 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 APOA1P02647 267 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 CCNYL3P0C7X3 344 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 HOXD8P13378 290 aaPredicted RBP10.55□□□□□ -0.72
RTN3-208ENST00000537981 IL1R1P14778 569 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 EPHA2P29317 976 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 SPRP35270 261 aaPredicted RBP10.55□□□□□ -0.72
RTN3-208ENST00000537981 MTHFRP42898 656 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 SLC15A1P46059 708 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 BPIFB3P59826 476 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 MYL6P60660 151 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 GSTO1P78417 241 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 STARD3Q14849 445 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 PTPRRQ15256 657 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 XKR9Q5GH70 373 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 FAM102AQ5T9C2 384 aaPredicted RBP10.55□□□□□ -0.72
RTN3-208ENST00000537981 ABI3BPQ7Z7G0 1075 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 TMC8Q8IU68 726 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 RIOX2Q8IUF8 465 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 COLGALT1Q8NBJ5 622 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 OR10Q1Q8NGQ4 319 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 PHF21BQ96EK2 531 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 SMAD5Q99717 465 aaKnown RBP10.55□□□□□ -0.72
RTN3-208ENST00000537981 GON7Q9BXV9 100 aa10.55□□□□□ -0.72
RTN3-208ENST00000537981 MEAF6Q9HAF1 191 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms