RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 TNRC6AQ8NDV7 1962 aaKnown RBP20.15■□□□□ 0.82
LTBR-205ENST00000535739 MED13Q9UHV7 2174 aa20.15■□□□□ 0.82
LTBR-205ENST00000535739 CDC14CA4D256 554 aa20.14■□□□□ 0.81
LTBR-205ENST00000535739 HLA-DPA1P20036 260 aa20.14■□□□□ 0.81
LTBR-205ENST00000535739 MARCKSL1P49006 195 aa20.14■□□□□ 0.81
LTBR-205ENST00000535739 DNASE1L3Q13609 305 aa20.14■□□□□ 0.81
LTBR-205ENST00000535739 ITGA9Q13797 1035 aa20.14■□□□□ 0.81
LTBR-205ENST00000535739 PLCL1Q15111 1095 aa20.14■□□□□ 0.81
LTBR-205ENST00000535739 PWWP2BQ6NUJ5 590 aa20.14■□□□□ 0.81
LTBR-205ENST00000535739 DET1Q7L5Y6 550 aa20.14■□□□□ 0.81
LTBR-205ENST00000535739 CT55Q8WUE5 264 aa20.14■□□□□ 0.81
LTBR-205ENST00000535739 NAT14Q8WUY8 206 aa20.14■□□□□ 0.81
LTBR-205ENST00000535739 ANP32BQ92688 251 aaKnown RBP20.14■□□□□ 0.81
LTBR-205ENST00000535739 VAT1Q99536 393 aa20.14■□□□□ 0.81
LTBR-205ENST00000535739 MAP3K3Q99759 626 aa20.14■□□□□ 0.81
LTBR-205ENST00000535739 TWSG1Q9GZX9 223 aa20.14■□□□□ 0.81
LTBR-205ENST00000535739 C10orf88Q9H8K7 445 aa20.14■□□□□ 0.81
LTBR-205ENST00000535739 LHX9Q9NQ69 397 aa20.14■□□□□ 0.81
LTBR-205ENST00000535739 IMP3Q9NV31 184 aaKnown RBP20.14■□□□□ 0.81
LTBR-205ENST00000535739 RSPH14Q9UHP6 348 aa20.14■□□□□ 0.81
LTBR-205ENST00000535739 RARRES3Q9UL19 164 aa20.14■□□□□ 0.81
LTBR-205ENST00000535739 PIPSLA2A3N6 862 aa20.13■□□□□ 0.81
LTBR-205ENST00000535739 STX7O15400 261 aaKnown RBP20.13■□□□□ 0.81
LTBR-205ENST00000535739 CREG1O75629 220 aa20.13■□□□□ 0.81
LTBR-205ENST00000535739 ZRANB2O95218 330 aaKnown RBP eCLIP20.13■□□□□ 0.815e-8■■■■■ 51.3
LTBR-205ENST00000535739 AGTP01019 485 aa20.13■□□□□ 0.81
LTBR-205ENST00000535739 MT-ND3P03897 115 aa20.13■□□□□ 0.81
LTBR-205ENST00000535739 EBLN1P0CF75 366 aa20.13■□□□□ 0.81
LTBR-205ENST00000535739 MTHFD1P11586 935 aaKnown RBP20.13■□□□□ 0.81
LTBR-205ENST00000535739 AKT1P31749 480 aa20.13■□□□□ 0.81
LTBR-205ENST00000535739 SRSF1Q07955 248 aaKnown RBP eCLIP20.13■□□□□ 0.81
LTBR-205ENST00000535739 FNBP1LQ5T0N5 605 aa20.13■□□□□ 0.81
LTBR-205ENST00000535739 METRNLQ641Q3 311 aa20.13■□□□□ 0.81
LTBR-205ENST00000535739 CYB5D1Q6P9G0 228 aa20.13■□□□□ 0.81
LTBR-205ENST00000535739 KLHL35Q6PF15 583 aa20.13■□□□□ 0.81
LTBR-205ENST00000535739 CCDC50Q8IVM0 306 aa20.13■□□□□ 0.81
LTBR-205ENST00000535739 KATNAL2Q8IYT4 538 aa20.13■□□□□ 0.81
LTBR-205ENST00000535739 RCOR2Q8IZ40 523 aa20.13■□□□□ 0.81
LTBR-205ENST00000535739 ZNF398Q8TD17 642 aa20.13■□□□□ 0.81
LTBR-205ENST00000535739 INSM2Q96T92 566 aaPredicted RBP20.13■□□□□ 0.81
LTBR-205ENST00000535739 FSD1LQ9BXM9 530 aa20.13■□□□□ 0.81
LTBR-205ENST00000535739 AKIRIN1Q9H9L7 192 aaPredicted RBP20.13■□□□□ 0.81
LTBR-205ENST00000535739 PCDHGA6Q9Y5G7 932 aa20.13■□□□□ 0.81
LTBR-205ENST00000535739 ARL5AQ9Y689 179 aa20.13■□□□□ 0.81
LTBR-205ENST00000535739 RP1L1Q8IWN7 2480 aaPredicted RBP20.13■□□□□ 0.81
LTBR-205ENST00000535739 AKR1B15C9JRZ8 316 aaPredicted RBP20.12■□□□□ 0.81
LTBR-205ENST00000535739 MKRN2OSH3BPM6 223 aa20.12■□□□□ 0.81
LTBR-205ENST00000535739 NTRK1P04629 796 aa20.12■□□□□ 0.81
LTBR-205ENST00000535739 MSH3P20585 1137 aa20.12■□□□□ 0.81
LTBR-205ENST00000535739 CDC25BP30305 580 aa20.12■□□□□ 0.81
LTBR-205ENST00000535739 HADHBP55084 474 aaKnown RBP20.12■□□□□ 0.81
LTBR-205ENST00000535739 KLRB1Q12918 225 aa20.12■□□□□ 0.81
LTBR-205ENST00000535739 XRCC4Q13426 336 aa20.12■□□□□ 0.81
LTBR-205ENST00000535739 DNTTIP2Q5QJE6 756 aaKnown RBP20.12■□□□□ 0.81
LTBR-205ENST00000535739 DUS1LQ6P1R4 473 aaKnown RBP20.12■□□□□ 0.81
LTBR-205ENST00000535739 CNGA4Q8IV77 575 aa20.12■□□□□ 0.81
LTBR-205ENST00000535739 RUFY1Q96T51 708 aa20.12■□□□□ 0.81
LTBR-205ENST00000535739 GORASP1Q9BQQ3 440 aa20.12■□□□□ 0.81
LTBR-205ENST00000535739 FICDQ9BVA6 458 aa20.12■□□□□ 0.81
LTBR-205ENST00000535739 HEMGNQ9BXL5 484 aa20.12■□□□□ 0.81
LTBR-205ENST00000535739 WWP1Q9H0M0 922 aa20.12■□□□□ 0.81
LTBR-205ENST00000535739 SMOXQ9NWM0 555 aa20.12■□□□□ 0.81
LTBR-205ENST00000535739 FAM8A1Q9UBU6 413 aa20.12■□□□□ 0.81
LTBR-205ENST00000535739 TRHDEQ9UKU6 1024 aa20.12■□□□□ 0.81
LTBR-205ENST00000535739 TFR2Q9UP52 801 aa20.12■□□□□ 0.81
LTBR-205ENST00000535739 PLAAQ9Y263 795 aa20.12■□□□□ 0.81
LTBR-205ENST00000535739 SEC16AO15027 2179 aa20.11■□□□□ 0.81
LTBR-205ENST00000535739 OR5K3A6NET4 321 aa20.11■□□□□ 0.81
LTBR-205ENST00000535739 HACD1B0YJ81 288 aa20.11■□□□□ 0.81
LTBR-205ENST00000535739 PRAMEF1O95521 474 aa20.11■□□□□ 0.81
LTBR-205ENST00000535739 RBL1P28749 1068 aa20.11■□□□□ 0.81
LTBR-205ENST00000535739 MAGEA1P43355 309 aa20.11■□□□□ 0.81
LTBR-205ENST00000535739 ACY1Q03154 408 aa20.11■□□□□ 0.81
LTBR-205ENST00000535739 UBAP2LQ14157 1087 aaKnown RBP20.11■□□□□ 0.81
LTBR-205ENST00000535739 LONRF2Q1L5Z9 754 aa20.11■□□□□ 0.81
LTBR-205ENST00000535739 TCTN3Q6NUS6 607 aa20.11■□□□□ 0.81
LTBR-205ENST00000535739 FAM199XQ6PEV8 388 aaPredicted RBP20.11■□□□□ 0.81
LTBR-205ENST00000535739 SPDYE1Q8NFV5 336 aaPredicted RBP20.11■□□□□ 0.81
LTBR-205ENST00000535739 KRT35Q92764 455 aa20.11■□□□□ 0.81
LTBR-205ENST00000535739 ZNF514Q96K75 400 aaPredicted RBP20.11■□□□□ 0.81
LTBR-205ENST00000535739 C12orf66Q96MD2 445 aa20.11■□□□□ 0.81
LTBR-205ENST00000535739 FCRL4Q96PJ5 515 aa20.11■□□□□ 0.81
LTBR-205ENST00000535739 ACTL8Q9H568 366 aa20.11■□□□□ 0.81
LTBR-205ENST00000535739 FGF21Q9NSA1 209 aa20.11■□□□□ 0.81
LTBR-205ENST00000535739 HRASLS2Q9NWW9 162 aa20.11■□□□□ 0.81
LTBR-205ENST00000535739 TLK1Q9UKI8 766 aa20.11■□□□□ 0.81
LTBR-205ENST00000535739 PRRC2CQ9Y520 2896 aaKnown RBP20.11■□□□□ 0.81
LTBR-205ENST00000535739 UBA6A0AVT1 1052 aaPredicted RBP20.1■□□□□ 0.81
LTBR-205ENST00000535739 MGAT4DA6NG13 374 aa20.1■□□□□ 0.81
LTBR-205ENST00000535739 TLCD2A6NGC4 264 aa20.1■□□□□ 0.81
LTBR-205ENST00000535739 C21orf140B9A014 251 aa20.1■□□□□ 0.81
LTBR-205ENST00000535739 H7C0C1 242 aa20.1■□□□□ 0.81
LTBR-205ENST00000535739 RFPL1O75677 317 aa20.1■□□□□ 0.81
LTBR-205ENST00000535739 LPOP22079 712 aaPredicted RBP20.1■□□□□ 0.81
LTBR-205ENST00000535739 ATP5OP48047 213 aa20.1■□□□□ 0.81
LTBR-205ENST00000535739 ARL4DP49703 201 aa20.1■□□□□ 0.81
LTBR-205ENST00000535739 TBX2Q13207 712 aaPredicted RBP20.1■□□□□ 0.81
LTBR-205ENST00000535739 OLIG2Q13516 323 aa20.1■□□□□ 0.81
LTBR-205ENST00000535739 BBS12Q6ZW61 710 aa20.1■□□□□ 0.81
LTBR-205ENST00000535739 KMT5CQ86Y97 462 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms