RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 DMC1Q14565 340 aa15.71■□□□□ 0.1
MCF2L-232ENST00000535094 GTDC1Q4AE62 458 aa15.71■□□□□ 0.1
MCF2L-232ENST00000535094 PM20D1Q6GTS8 502 aa15.71■□□□□ 0.1
MCF2L-232ENST00000535094 CYP20A1Q6UW02 462 aa15.71■□□□□ 0.1
MCF2L-232ENST00000535094 SPATA19Q7Z5L4 167 aa15.71■□□□□ 0.1
MCF2L-232ENST00000535094 CNTN4Q8IWV2 1026 aa15.71■□□□□ 0.1
MCF2L-232ENST00000535094 ADHFE1Q8IWW8 467 aa15.71■□□□□ 0.1
MCF2L-232ENST00000535094 LGI2Q8N0V4 545 aa15.71■□□□□ 0.1
MCF2L-232ENST00000535094 UBXN10Q96LJ8 280 aa15.71■□□□□ 0.1
MCF2L-232ENST00000535094 TRIM62Q9BVG3 475 aa15.71■□□□□ 0.1
MCF2L-232ENST00000535094 PALMDQ9NP74 551 aa15.71■□□□□ 0.1
MCF2L-232ENST00000535094 UTS2RQ9UKP6 389 aa15.71■□□□□ 0.1
MCF2L-232ENST00000535094 A0A1W2PQ67 120 aa15.7■□□□□ 0.1
MCF2L-232ENST00000535094 PSMD11O00231 422 aa15.7■□□□□ 0.1
MCF2L-232ENST00000535094 DLGAP1O14490 977 aa15.7■□□□□ 0.1
MCF2L-232ENST00000535094 CPSF4O95639 269 aaKnown RBP15.7■□□□□ 0.1
MCF2L-232ENST00000535094 GSTT2P0CG29 244 aa15.7■□□□□ 0.1
MCF2L-232ENST00000535094 GSTT2BP0CG30 244 aa15.7■□□□□ 0.1
MCF2L-232ENST00000535094 UROSP10746 265 aa15.7■□□□□ 0.1
MCF2L-232ENST00000535094 CDH1P12830 882 aa15.7■□□□□ 0.1
MCF2L-232ENST00000535094 SPARTQ8N0X7 666 aa15.7■□□□□ 0.1
MCF2L-232ENST00000535094 MCFD2Q8NI22 146 aa15.7■□□□□ 0.1
MCF2L-232ENST00000535094 CDKN2AIPNLQ96HQ2 116 aa15.7■□□□□ 0.1
MCF2L-232ENST00000535094 INIPQ9NRY2 104 aa15.7■□□□□ 0.1
MCF2L-232ENST00000535094 COL11A1P12107 1806 aaPredicted RBP15.7■□□□□ 0.1
MCF2L-232ENST00000535094 PHIPQ8WWQ0 1821 aa15.7■□□□□ 0.1
MCF2L-232ENST00000535094 MLYCDO95822 493 aa15.7■□□□□ 0.1
MCF2L-232ENST00000535094 AXLP30530 894 aa15.7■□□□□ 0.1
MCF2L-232ENST00000535094 HOXD12P35452 270 aa15.7■□□□□ 0.1
MCF2L-232ENST00000535094 IDUAP35475 653 aa15.7■□□□□ 0.1
MCF2L-232ENST00000535094 HPCAL1P37235 193 aa15.7■□□□□ 0.1
MCF2L-232ENST00000535094 THPOP40225 353 aa15.7■□□□□ 0.1
MCF2L-232ENST00000535094 ERVK-8P63133 956 aa15.7■□□□□ 0.1
MCF2L-232ENST00000535094 RSBN1Q5VWQ0 802 aaPredicted RBP15.7■□□□□ 0.1
MCF2L-232ENST00000535094 FAM117BQ6P1L5 589 aa15.7■□□□□ 0.1
MCF2L-232ENST00000535094 ZNF549Q6P9A3 640 aa15.7■□□□□ 0.1
MCF2L-232ENST00000535094 LRRTM3Q86VH5 581 aa15.7■□□□□ 0.1
MCF2L-232ENST00000535094 OR6K2Q8NGY2 324 aa15.7■□□□□ 0.1
MCF2L-232ENST00000535094 TRUB1Q8WWH5 349 aaKnown RBP15.7■□□□□ 0.1
MCF2L-232ENST00000535094 FKBPLQ9UIM3 349 aa15.7■□□□□ 0.1
MCF2L-232ENST00000535094 PCDHGA11Q9Y5H2 935 aa15.7■□□□□ 0.1
MCF2L-232ENST00000535094 KCNE1P15382 129 aa15.7■□□□□ 0.1
MCF2L-232ENST00000535094 MC4RP32245 332 aa15.7■□□□□ 0.1
MCF2L-232ENST00000535094 IDH2P48735 452 aaKnown RBP15.7■□□□□ 0.1
MCF2L-232ENST00000535094 BRMS1LQ5PSV4 323 aa15.7■□□□□ 0.1
MCF2L-232ENST00000535094 HACD2Q6Y1H2 254 aa15.7■□□□□ 0.1
MCF2L-232ENST00000535094 C16orf59Q7L2K0 433 aa15.7■□□□□ 0.1
MCF2L-232ENST00000535094 TSGA13Q96PP4 275 aa15.7■□□□□ 0.1
MCF2L-232ENST00000535094 MARCH2Q9P0N8 246 aa15.7■□□□□ 0.1
MCF2L-232ENST00000535094 GMIPQ9P107 970 aa15.7■□□□□ 0.1
MCF2L-232ENST00000535094 ERVK-18Q9QC07 812 aa15.7■□□□□ 0.1
MCF2L-232ENST00000535094 DNAJC25-GNG10A0A024R161 153 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 ACOX3O15254 700 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 SERPINA1P01009 418 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 KRT8P05787 483 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 CTPS1P17812 591 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 CYP2C18P33260 490 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 S100A5P33763 92 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 ZNF135P52742 658 aaPredicted RBP15.69■□□□□ 0.1
MCF2L-232ENST00000535094 TMBIM6P55061 237 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 OXCT1P55809 520 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 EEFSECP57772 596 aaKnown RBP15.69■□□□□ 0.1
MCF2L-232ENST00000535094 SEMG2Q02383 582 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 SEMA3AQ14563 771 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 COLEC12Q5KU26 742 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 CACHD1Q5VU97 1274 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 CYHR1Q6ZMK1 362 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 ATP6V0D2Q8N8Y2 350 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 NDNFQ8TB73 568 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 IPPKQ9H8X2 491 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 FAM118AQ9NWS6 357 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 COL1A2P08123 1366 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 ELOVL7A1L3X0 281 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 NBNO60934 754 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 PGLSO95336 258 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 NTRK1P04629 796 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 PIGAP37287 484 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 SKIV2LQ15477 1246 aaKnown RBP15.69■□□□□ 0.1
MCF2L-232ENST00000535094 NPTX1Q15818 432 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 P2RY8Q86VZ1 359 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 UTP15Q8TED0 518 aaKnown RBP15.69■□□□□ 0.1
MCF2L-232ENST00000535094 WDR37Q9Y2I8 494 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 GPR45Q9Y5Y3 372 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 ZNF831Q5JPB2 1677 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 ARID2Q68CP9 1835 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 LOC100130705A0A1B0GUX0 176 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 HTR3EA5X5Y0 456 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 ZNF99A8MXY4 864 aaPredicted RBP15.69■□□□□ 0.1
MCF2L-232ENST00000535094 KRT75O95678 551 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 IGFBP5P24593 272 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 HTR1BP28222 390 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 MLLT6P55198 1093 aaPredicted RBP15.69■□□□□ 0.1
MCF2L-232ENST00000535094 SPANXN4Q5MJ08 99 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 CXCL17Q6UXB2 119 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 LINGO4Q6UY18 593 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 DSG4Q86SJ6 1040 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 RAVER1Q8IY67 606 aaKnown RBP15.69■□□□□ 0.1
MCF2L-232ENST00000535094 STON2Q8WXE9 905 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 AIG1Q9NVV5 245 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 TMEM9Q9P0T7 183 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms