RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 ETS1P14921 441 aa17.43■□□□□ 0.38
SMG1-203ENST00000532700 MSH3P20585 1137 aa17.43■□□□□ 0.38
SMG1-203ENST00000532700 CD82P27701 267 aa17.43■□□□□ 0.38
SMG1-203ENST00000532700 CETN2P41208 172 aa17.43■□□□□ 0.38
SMG1-203ENST00000532700 PRPSAP1Q14558 356 aa17.43■□□□□ 0.38
SMG1-203ENST00000532700 ZNF658BQ4V348 819 aaPredicted RBP17.43■□□□□ 0.38
SMG1-203ENST00000532700 DCAF12Q5T6F0 453 aa17.43■□□□□ 0.38
SMG1-203ENST00000532700 TMEM164Q5U3C3 297 aa17.43■□□□□ 0.38
SMG1-203ENST00000532700 METRNLQ641Q3 311 aa17.43■□□□□ 0.38
SMG1-203ENST00000532700 ARHGEF18Q6ZSZ5 1173 aa17.43■□□□□ 0.38
SMG1-203ENST00000532700 UBL4BQ8N7F7 174 aa17.43■□□□□ 0.38
SMG1-203ENST00000532700 CXorf40BQ96DE9 158 aa17.43■□□□□ 0.38
SMG1-203ENST00000532700 PPM1MQ96MI6 270 aa17.43■□□□□ 0.38
SMG1-203ENST00000532700 SLC12A9Q9BXP2 914 aa17.43■□□□□ 0.38
SMG1-203ENST00000532700 LOC101059948A0A1B0GTJ6 334 aa17.42■□□□□ 0.38
SMG1-203ENST00000532700 OR51F1A6NGY5 319 aa17.42■□□□□ 0.38
SMG1-203ENST00000532700 PYCARD-AS1I3L0S3 204 aa17.42■□□□□ 0.38
SMG1-203ENST00000532700 PPFIA2O75334 1257 aa17.42■□□□□ 0.38
SMG1-203ENST00000532700 STK10O94804 968 aaKnown RBP17.42■□□□□ 0.38
SMG1-203ENST00000532700 DLGAP3O95886 979 aa17.42■□□□□ 0.38
SMG1-203ENST00000532700 MC4RP32245 332 aa17.42■□□□□ 0.38
SMG1-203ENST00000532700 GRIA1P42261 906 aa17.42■□□□□ 0.38
SMG1-203ENST00000532700 POU6F1Q14863 301 aa17.42■□□□□ 0.38
SMG1-203ENST00000532700 SIX1Q15475 284 aaPredicted RBP17.42■□□□□ 0.38
SMG1-203ENST00000532700 OASLQ15646 514 aaKnown RBP17.42■□□□□ 0.38
SMG1-203ENST00000532700 PARP6Q2NL67 630 aa17.42■□□□□ 0.38
SMG1-203ENST00000532700 PIANPQ8IYJ0 282 aa17.42■□□□□ 0.38
SMG1-203ENST00000532700 CACNA2D3Q8IZS8 1091 aa17.42■□□□□ 0.38
SMG1-203ENST00000532700 NXPE1Q8N323 547 aa17.42■□□□□ 0.38
SMG1-203ENST00000532700 C1orf54Q8WWF1 131 aa17.42■□□□□ 0.38
SMG1-203ENST00000532700 FBXO8Q9NRD0 319 aa17.42■□□□□ 0.38
SMG1-203ENST00000532700 IMP3Q9NV31 184 aaKnown RBP17.42■□□□□ 0.38
SMG1-203ENST00000532700 PIKFYVEQ9Y2I7 2098 aa17.41■□□□□ 0.38
SMG1-203ENST00000532700 BSNQ9UPA5 3926 aa17.41■□□□□ 0.38
SMG1-203ENST00000532700 IGHV5-51A0A0C4DH38 117 aa17.41■□□□□ 0.38
SMG1-203ENST00000532700 TRBV5-4A0A0C4DH59 114 aa17.41■□□□□ 0.38
SMG1-203ENST00000532700 MGAT4DA6NG13 374 aa17.41■□□□□ 0.38
SMG1-203ENST00000532700 ZIC2O95409 532 aaPredicted RBP17.41■□□□□ 0.38
SMG1-203ENST00000532700 TIAF1O95411 115 aa17.41■□□□□ 0.38
SMG1-203ENST00000532700 POLBP06746 335 aa17.41■□□□□ 0.38
SMG1-203ENST00000532700 MTHFD1P11586 935 aaKnown RBP17.41■□□□□ 0.38
SMG1-203ENST00000532700 AMD1P17707 334 aa17.41■□□□□ 0.38
SMG1-203ENST00000532700 ARCN1P48444 511 aaKnown RBP17.41■□□□□ 0.38
SMG1-203ENST00000532700 C19orf57Q0VDD7 668 aa17.41■□□□□ 0.38
SMG1-203ENST00000532700 KCNAB1Q14722 419 aa17.41■□□□□ 0.38
SMG1-203ENST00000532700 TBR1Q16650 682 aa17.41■□□□□ 0.38
SMG1-203ENST00000532700 BCL7AQ4VC05 210 aa17.41■□□□□ 0.38
SMG1-203ENST00000532700 CCDC38Q502W7 563 aa17.41■□□□□ 0.38
SMG1-203ENST00000532700 IRGCQ6NXR0 463 aa17.41■□□□□ 0.38
SMG1-203ENST00000532700 FBXO38Q6PIJ6 1188 aa17.41■□□□□ 0.38
SMG1-203ENST00000532700 PLXDC1Q8IUK5 500 aa17.41■□□□□ 0.38
SMG1-203ENST00000532700 WBP1Q96G27 269 aa17.41■□□□□ 0.38
SMG1-203ENST00000532700 ELMO2Q96JJ3 720 aa17.41■□□□□ 0.38
SMG1-203ENST00000532700 PDLIM2Q96JY6 352 aa17.41■□□□□ 0.38
SMG1-203ENST00000532700 ALS2CR12Q96Q35 445 aa17.41■□□□□ 0.38
SMG1-203ENST00000532700 ZCCHC2Q9C0B9 1178 aaKnown RBP17.41■□□□□ 0.38
SMG1-203ENST00000532700 EPB41L1Q9H4G0 881 aa17.41■□□□□ 0.38
SMG1-203ENST00000532700 ZNF768Q9H5H4 540 aaKnown RBP17.41■□□□□ 0.38
SMG1-203ENST00000532700 LZTFL1Q9NQ48 299 aa17.41■□□□□ 0.38
SMG1-203ENST00000532700 IL17BQ9UHF5 180 aa17.41■□□□□ 0.38
SMG1-203ENST00000532700 CRLS1Q9UJA2 301 aa17.41■□□□□ 0.38
SMG1-203ENST00000532700 PPP2R2CQ9Y2T4 447 aa17.41■□□□□ 0.38
SMG1-203ENST00000532700 PCDHB11Q9Y5F2 797 aa17.41■□□□□ 0.38
SMG1-203ENST00000532700 PIEZO2Q9H5I5 2752 aa17.4■□□□□ 0.38
SMG1-203ENST00000532700 IGLV3-16A0A075B6K0 115 aa17.4■□□□□ 0.38
SMG1-203ENST00000532700 LIASO43766 372 aa17.4■□□□□ 0.38
SMG1-203ENST00000532700 STK17BO94768 372 aa17.4■□□□□ 0.38
SMG1-203ENST00000532700 CRTAMO95727 393 aa17.4■□□□□ 0.38
SMG1-203ENST00000532700 AP2A1O95782 977 aa17.4■□□□□ 0.38
SMG1-203ENST00000532700 FAM87AP0C7U9 286 aa17.4■□□□□ 0.38
SMG1-203ENST00000532700 PLA2G2AP14555 144 aa17.4■□□□□ 0.38
SMG1-203ENST00000532700 VCLP18206 1134 aa17.4■□□□□ 0.38
SMG1-203ENST00000532700 F8A1P23610 371 aa17.4■□□□□ 0.38
SMG1-203ENST00000532700 PRLHRP49683 370 aa17.4■□□□□ 0.38
SMG1-203ENST00000532700 RAB15P59190 212 aa17.4■□□□□ 0.38
SMG1-203ENST00000532700 SEPT6Q14141 434 aa17.4■□□□□ 0.38
SMG1-203ENST00000532700 LONRF2Q1L5Z9 754 aa17.4■□□□□ 0.38
SMG1-203ENST00000532700 PRSS42Q7Z5A4 293 aa17.4■□□□□ 0.38
SMG1-203ENST00000532700 CLDN19Q8N6F1 224 aa17.4■□□□□ 0.38
SMG1-203ENST00000532700 AVL9Q8NBF6 648 aa17.4■□□□□ 0.38
SMG1-203ENST00000532700 TTC13Q8NBP0 860 aa17.4■□□□□ 0.38
SMG1-203ENST00000532700 OR52K1Q8NGK4 314 aa17.4■□□□□ 0.38
SMG1-203ENST00000532700 OR2L2Q8NH16 312 aa17.4■□□□□ 0.38
SMG1-203ENST00000532700 ASPSCR1Q9BZE9 553 aa17.4■□□□□ 0.38
SMG1-203ENST00000532700 NLE1Q9NVX2 485 aaPredicted RBP17.4■□□□□ 0.38
SMG1-203ENST00000532700 TMEM184BQ9Y519 407 aaPredicted RBP17.4■□□□□ 0.38
SMG1-203ENST00000532700 MRPS18BQ9Y676 258 aaKnown RBP17.4■□□□□ 0.38
SMG1-203ENST00000532700 PRSS21Q9Y6M0 314 aa17.4■□□□□ 0.38
SMG1-203ENST00000532700 ZNF462Q96JM2 2506 aa17.39■□□□□ 0.37
SMG1-203ENST00000532700 RASSF9O75901 435 aa17.39■□□□□ 0.37
SMG1-203ENST00000532700 PDHA2P29803 388 aa17.39■□□□□ 0.37
SMG1-203ENST00000532700 HALP42357 657 aa17.39■□□□□ 0.37
SMG1-203ENST00000532700 NFKB2Q00653 900 aa17.39■□□□□ 0.37
SMG1-203ENST00000532700 FOXM1Q08050 763 aa17.39■□□□□ 0.37
SMG1-203ENST00000532700 SNX1Q13596 522 aa17.39■□□□□ 0.37
SMG1-203ENST00000532700 DBN1Q16643 649 aa17.39■□□□□ 0.37
SMG1-203ENST00000532700 ATP1A1-AS1Q5TC04 95 aa17.39■□□□□ 0.37
SMG1-203ENST00000532700 CACHD1Q5VU97 1274 aa17.39■□□□□ 0.37
SMG1-203ENST00000532700 CEACAM20Q6UY09 585 aa17.39■□□□□ 0.37
SMG1-203ENST00000532700 SNX20Q7Z614 316 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms