RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 TRIM77I1YAP6 450 aa5.16□□□□□ -1.58
HMGB1P46-201ENST00000520062 PLK4O00444 970 aa5.16□□□□□ -1.58
HMGB1P46-201ENST00000520062 PPEF2O14830 753 aa5.16□□□□□ -1.58
HMGB1P46-201ENST00000520062 CLIC2O15247 247 aa5.16□□□□□ -1.58
HMGB1P46-201ENST00000520062 BUD23O43709 281 aaKnown RBP5.16□□□□□ -1.58
HMGB1P46-201ENST00000520062 RAB40ALP0C0E4 278 aa5.16□□□□□ -1.58
HMGB1P46-201ENST00000520062 OR52Z1P0C646 297 aa5.16□□□□□ -1.58
HMGB1P46-201ENST00000520062 PSMA3P25788 255 aa5.16□□□□□ -1.58
HMGB1P46-201ENST00000520062 CDC25CP30307 473 aa5.16□□□□□ -1.58
HMGB1P46-201ENST00000520062 GABRA5P31644 462 aa5.16□□□□□ -1.58
HMGB1P46-201ENST00000520062 PGGT1BP53609 377 aa5.16□□□□□ -1.58
HMGB1P46-201ENST00000520062 NAGLUP54802 743 aa5.16□□□□□ -1.58
HMGB1P46-201ENST00000520062 PRKCZQ05513 592 aa5.16□□□□□ -1.58
HMGB1P46-201ENST00000520062 KLF9Q13886 244 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P46-201ENST00000520062 E2F5Q15329 346 aa5.16□□□□□ -1.58
HMGB1P46-201ENST00000520062 CDC37Q16543 378 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P46-201ENST00000520062 TYSND1Q2T9J0 566 aa5.16□□□□□ -1.58
HMGB1P46-201ENST00000520062 TWISTNBQ3B726 338 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P46-201ENST00000520062 SPATA19Q7Z5L4 167 aa5.16□□□□□ -1.58
HMGB1P46-201ENST00000520062 ABI3BPQ7Z7G0 1075 aa5.16□□□□□ -1.58
HMGB1P46-201ENST00000520062 TIGD4Q8IY51 512 aa5.16□□□□□ -1.58
HMGB1P46-201ENST00000520062 C1orf52Q8N6N3 182 aaKnown RBP5.16□□□□□ -1.58
HMGB1P46-201ENST00000520062 ZNF713Q8N859 430 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P46-201ENST00000520062 PRR26Q8N8Z3 221 aa5.16□□□□□ -1.58
HMGB1P46-201ENST00000520062 NRACQ8N912 160 aa5.16□□□□□ -1.58
HMGB1P46-201ENST00000520062 C9orf43Q8TAL5 461 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P46-201ENST00000520062 HMGCLL1Q8TB92 370 aa5.16□□□□□ -1.58
HMGB1P46-201ENST00000520062 WASF1Q92558 559 aa5.16□□□□□ -1.58
HMGB1P46-201ENST00000520062 SPSB1Q96BD6 273 aa5.16□□□□□ -1.58
HMGB1P46-201ENST00000520062 CCDC114Q96M63 670 aa5.16□□□□□ -1.58
HMGB1P46-201ENST00000520062 KRTAP9-9Q9BYP9 154 aa5.16□□□□□ -1.58
HMGB1P46-201ENST00000520062 DNAI2Q9GZS0 605 aa5.16□□□□□ -1.58
HMGB1P46-201ENST00000520062 SPRTNQ9H040 489 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P46-201ENST00000520062 EBF3Q9H4W6 596 aa5.16□□□□□ -1.58
HMGB1P46-201ENST00000520062 DNAJB9Q9UBS3 223 aa5.16□□□□□ -1.58
HMGB1P46-201ENST00000520062 AMDHD2Q9Y303 409 aa5.16□□□□□ -1.58
HMGB1P46-201ENST00000520062 PCDHAC2Q9Y5I4 1007 aa5.16□□□□□ -1.58
HMGB1P46-201ENST00000520062 A0A1W2PPQ1 181 aa5.15□□□□□ -1.59
HMGB1P46-201ENST00000520062 FEZF1A0PJY2 475 aa5.15□□□□□ -1.59
HMGB1P46-201ENST00000520062 CLDN4O14493 209 aa5.15□□□□□ -1.59
HMGB1P46-201ENST00000520062 OR2T7P0C7T2 308 aa5.15□□□□□ -1.59
HMGB1P46-201ENST00000520062 ATP6V1B1P15313 513 aa5.15□□□□□ -1.59
HMGB1P46-201ENST00000520062 ASCL1P50553 236 aa5.15□□□□□ -1.59
HMGB1P46-201ENST00000520062 HNRNPKP61978 463 aaKnown RBP eCLIP5.15□□□□□ -1.59
HMGB1P46-201ENST00000520062 TUBB4BP68371 445 aa5.15□□□□□ -1.59
HMGB1P46-201ENST00000520062 PDE1BQ01064 536 aa5.15□□□□□ -1.59
HMGB1P46-201ENST00000520062 PTK6Q13882 451 aa5.15□□□□□ -1.59
HMGB1P46-201ENST00000520062 DHX34Q14147 1143 aaKnown RBP5.15□□□□□ -1.59
HMGB1P46-201ENST00000520062 GCNT6Q5T4J0 391 aa5.15□□□□□ -1.59
HMGB1P46-201ENST00000520062 SFMBT2Q5VUG0 894 aa5.15□□□□□ -1.59
HMGB1P46-201ENST00000520062 MOXD1Q6UVY6 613 aa5.15□□□□□ -1.59
HMGB1P46-201ENST00000520062 ZNF704Q6ZNC4 412 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P46-201ENST00000520062 C11orf57Q6ZUT1 292 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P46-201ENST00000520062 CCDC91Q7Z6B0 441 aa5.15□□□□□ -1.59
HMGB1P46-201ENST00000520062 NUP93Q8N1F7 819 aa5.15□□□□□ -1.59
HMGB1P46-201ENST00000520062 TMCO5AQ8N6Q1 288 aa5.15□□□□□ -1.59
HMGB1P46-201ENST00000520062 KCNE4Q8WWG9 221 aa5.15□□□□□ -1.59
HMGB1P46-201ENST00000520062 SLC44A1Q8WWI5 657 aa5.15□□□□□ -1.59
HMGB1P46-201ENST00000520062 CORO2AQ92828 525 aa5.15□□□□□ -1.59
HMGB1P46-201ENST00000520062 PIGTQ969N2 578 aa5.15□□□□□ -1.59
HMGB1P46-201ENST00000520062 MTBPQ96DY7 904 aa5.15□□□□□ -1.59
HMGB1P46-201ENST00000520062 SPDL1Q96EA4 605 aa5.15□□□□□ -1.59
HMGB1P46-201ENST00000520062 MUS81Q96NY9 551 aa5.15□□□□□ -1.59
HMGB1P46-201ENST00000520062 SLX1AQ9BQ83 275 aa5.15□□□□□ -1.59
HMGB1P46-201ENST00000520062 SF3B5Q9BWJ5 86 aaKnown RBP5.15□□□□□ -1.59
HMGB1P46-201ENST00000520062 DDX43Q9NXZ2 648 aaKnown RBP5.15□□□□□ -1.59
HMGB1P46-201ENST00000520062 INSL5Q9Y5Q6 135 aa5.15□□□□□ -1.59
HMGB1P46-201ENST00000520062 SNX9Q9Y5X1 595 aa5.15□□□□□ -1.59
HMGB1P46-201ENST00000520062 PRAG1Q86YV5 1406 aa5.14□□□□□ -1.59
HMGB1P46-201ENST00000520062 TMEM221A6NGB7 291 aa5.14□□□□□ -1.59
HMGB1P46-201ENST00000520062 LILRA5A6NI73 299 aa5.14□□□□□ -1.59
HMGB1P46-201ENST00000520062 ENO4A6NNW6 628 aa5.14□□□□□ -1.59
HMGB1P46-201ENST00000520062 C15orf62A8K5M9 175 aa5.14□□□□□ -1.59
HMGB1P46-201ENST00000520062 ANKRD66B4E2M5 251 aa5.14□□□□□ -1.59
HMGB1P46-201ENST00000520062 IFIT3O14879 490 aaKnown RBP5.14□□□□□ -1.59
HMGB1P46-201ENST00000520062 XRCC3O43542 346 aa5.14□□□□□ -1.59
HMGB1P46-201ENST00000520062 KCNJ13O60928 360 aa5.14□□□□□ -1.59
HMGB1P46-201ENST00000520062 TOMM40O96008 361 aa5.14□□□□□ -1.59
HMGB1P46-201ENST00000520062 LDLRP01130 860 aa5.14□□□□□ -1.59
HMGB1P46-201ENST00000520062 HOXC6P09630 235 aa5.14□□□□□ -1.59
HMGB1P46-201ENST00000520062 PDGFRAP16234 1089 aa5.14□□□□□ -1.59
HMGB1P46-201ENST00000520062 ADRA2CP18825 462 aa5.14□□□□□ -1.59
HMGB1P46-201ENST00000520062 S1PR1P21453 382 aa5.14□□□□□ -1.59
HMGB1P46-201ENST00000520062 FBLP22087 321 aaKnown RBP5.14□□□□□ -1.59
HMGB1P46-201ENST00000520062 SSTR2P30874 369 aa5.14□□□□□ -1.59
HMGB1P46-201ENST00000520062 SLC9A3P48764 834 aa5.14□□□□□ -1.59
HMGB1P46-201ENST00000520062 HMGA2P52926 109 aa5.14□□□□□ -1.59
HMGB1P46-201ENST00000520062 SLMAPQ14BN4 828 aa5.14□□□□□ -1.59
HMGB1P46-201ENST00000520062 CALCRLQ16602 461 aa5.14□□□□□ -1.59
HMGB1P46-201ENST00000520062 MEP1BQ16820 701 aa5.14□□□□□ -1.59
HMGB1P46-201ENST00000520062 ZRANB3Q5FWF4 1079 aa5.14□□□□□ -1.59
HMGB1P46-201ENST00000520062 PRR27Q6MZM9 219 aa5.14□□□□□ -1.59
HMGB1P46-201ENST00000520062 TRNP1Q6NT89 227 aa5.14□□□□□ -1.59
HMGB1P46-201ENST00000520062 ZBTB49Q6ZSB9 765 aa5.14□□□□□ -1.59
HMGB1P46-201ENST00000520062 PIWIL3Q7Z3Z3 882 aaKnown RBP5.14□□□□□ -1.59
HMGB1P46-201ENST00000520062 MAP7D3Q8IWC1 876 aa5.14□□□□□ -1.59
HMGB1P46-201ENST00000520062 CEP57L1Q8IYX8 460 aa5.14□□□□□ -1.59
HMGB1P46-201ENST00000520062 ZNF34Q8IZ26 560 aa5.14□□□□□ -1.59
HMGB1P46-201ENST00000520062 SIX6OS1Q8N1H7 587 aa5.14□□□□□ -1.59
HMGB1P46-201ENST00000520062 MSANTD4Q8NCY6 345 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms