RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 OOSP2Q86WS3 158 aa14.28□□□□□ -0.12
SCARNA20.5-201ENST00000516991 CNGA4Q8IV77 575 aa14.28□□□□□ -0.12
SCARNA20.5-201ENST00000516991 VSTM4Q8IW00 320 aa14.28□□□□□ -0.12
SCARNA20.5-201ENST00000516991 BEND7Q8N7W2 519 aaPredicted RBP14.28□□□□□ -0.12
SCARNA20.5-201ENST00000516991 CLEC18CQ8NCF0 446 aa14.28□□□□□ -0.12
SCARNA20.5-201ENST00000516991 IPMKQ8NFU5 416 aa14.28□□□□□ -0.12
SCARNA20.5-201ENST00000516991 OR8K5Q8NH50 307 aa14.28□□□□□ -0.12
SCARNA20.5-201ENST00000516991 THAP4Q8WY91 577 aa14.28□□□□□ -0.12
SCARNA20.5-201ENST00000516991 OXNAD1Q96HP4 312 aaPredicted RBP14.28□□□□□ -0.12
SCARNA20.5-201ENST00000516991 CHP1Q99653 195 aa14.28□□□□□ -0.12
SCARNA20.5-201ENST00000516991 COL12A1Q99715 3063 aa14.28□□□□□ -0.12
SCARNA20.5-201ENST00000516991 GPR87Q9BY21 358 aa14.28□□□□□ -0.12
SCARNA20.5-201ENST00000516991 ACTL8Q9H568 366 aa14.28□□□□□ -0.12
SCARNA20.5-201ENST00000516991 FGF21Q9NSA1 209 aa14.28□□□□□ -0.12
SCARNA20.5-201ENST00000516991 IMP3Q9NV31 184 aaKnown RBP14.28□□□□□ -0.12
SCARNA20.5-201ENST00000516991 SAE1Q9UBE0 346 aaPredicted RBP14.28□□□□□ -0.12
SCARNA20.5-201ENST00000516991 ACSL5Q9ULC5 683 aa14.28□□□□□ -0.12
SCARNA20.5-201ENST00000516991 PSMD13Q9UNM6 376 aa14.28□□□□□ -0.12
SCARNA20.5-201ENST00000516991 HYOU1Q9Y4L1 999 aa14.28□□□□□ -0.12
SCARNA20.5-201ENST00000516991 UBA6A0AVT1 1052 aaPredicted RBP14.27□□□□□ -0.13
SCARNA20.5-201ENST00000516991 OR5K3A6NET4 321 aa14.27□□□□□ -0.13
SCARNA20.5-201ENST00000516991 OR2AG2A6NM03 316 aa14.27□□□□□ -0.13
SCARNA20.5-201ENST00000516991 GAPDHSO14556 408 aaPredicted RBP14.27□□□□□ -0.13
SCARNA20.5-201ENST00000516991 STX7O15400 261 aaKnown RBP14.27□□□□□ -0.13
SCARNA20.5-201ENST00000516991 UGT1A9O60656 530 aa14.27□□□□□ -0.13
SCARNA20.5-201ENST00000516991 CPNE3O75131 537 aaKnown RBP14.27□□□□□ -0.13
SCARNA20.5-201ENST00000516991 TIAF1O95411 115 aa14.27□□□□□ -0.13
SCARNA20.5-201ENST00000516991 NTRK1P04629 796 aa14.27□□□□□ -0.13
SCARNA20.5-201ENST00000516991 SLC35G4P0C7Q5 338 aa14.27□□□□□ -0.13
SCARNA20.5-201ENST00000516991 FOLR1P15328 257 aa14.27□□□□□ -0.13
SCARNA20.5-201ENST00000516991 UGT1A6P19224 532 aa14.27□□□□□ -0.13
SCARNA20.5-201ENST00000516991 MSH3P20585 1137 aa14.27□□□□□ -0.13
SCARNA20.5-201ENST00000516991 UGT1A1P22309 533 aa14.27□□□□□ -0.13
SCARNA20.5-201ENST00000516991 UGT1A4P22310 534 aa14.27□□□□□ -0.13
SCARNA20.5-201ENST00000516991 CD97P48960 835 aa14.27□□□□□ -0.13
SCARNA20.5-201ENST00000516991 GEMP55040 296 aa14.27□□□□□ -0.13
SCARNA20.5-201ENST00000516991 PPP1CAP62136 330 aa14.27□□□□□ -0.13
SCARNA20.5-201ENST00000516991 HSD11B2P80365 405 aa14.27□□□□□ -0.13
SCARNA20.5-201ENST00000516991 NFE2L1Q14494 772 aa14.27□□□□□ -0.13
SCARNA20.5-201ENST00000516991 METRNLQ641Q3 311 aa14.27□□□□□ -0.13
SCARNA20.5-201ENST00000516991 ARMC6Q6NXE6 501 aa14.27□□□□□ -0.13
SCARNA20.5-201ENST00000516991 FAM83HQ6ZRV2 1179 aaPredicted RBP14.27□□□□□ -0.13
SCARNA20.5-201ENST00000516991 SYVN1Q86TM6 617 aa14.27□□□□□ -0.13
SCARNA20.5-201ENST00000516991 ZC3H18Q86VM9 953 aaKnown RBP14.27□□□□□ -0.13
SCARNA20.5-201ENST00000516991 KATNAL2Q8IYT4 538 aa14.27□□□□□ -0.13
SCARNA20.5-201ENST00000516991 ZNF567Q8N184 647 aa14.27□□□□□ -0.13
SCARNA20.5-201ENST00000516991 MIB2Q96AX9 1013 aa14.27□□□□□ -0.13
SCARNA20.5-201ENST00000516991 RNF31Q96EP0 1072 aa14.27□□□□□ -0.13
SCARNA20.5-201ENST00000516991 RBM41Q96IZ5 413 aaKnown RBP14.27□□□□□ -0.13
SCARNA20.5-201ENST00000516991 MAP3K3Q99759 626 aa14.27□□□□□ -0.13
SCARNA20.5-201ENST00000516991 FERMT1Q9BQL6 677 aa14.27□□□□□ -0.13
SCARNA20.5-201ENST00000516991 UGT1A7Q9HAW7 530 aa14.27□□□□□ -0.13
SCARNA20.5-201ENST00000516991 UGT1A10Q9HAW8 530 aa14.27□□□□□ -0.13
SCARNA20.5-201ENST00000516991 UGT1A8Q9HAW9 530 aa14.27□□□□□ -0.13
SCARNA20.5-201ENST00000516991 RSPH14Q9UHP6 348 aa14.27□□□□□ -0.13
SCARNA20.5-201ENST00000516991 hCG_1818297A0A087WSY0 165 aa14.26□□□□□ -0.13
SCARNA20.5-201ENST00000516991 MGAT4DA6NG13 374 aa14.26□□□□□ -0.13
SCARNA20.5-201ENST00000516991 GPR39O43194 453 aa14.26□□□□□ -0.13
SCARNA20.5-201ENST00000516991 ANXA9O76027 345 aa14.26□□□□□ -0.13
SCARNA20.5-201ENST00000516991 ZRANB2O95218 330 aaKnown RBP eCLIP14.26□□□□□ -0.13
SCARNA20.5-201ENST00000516991 PRAMEF1O95521 474 aa14.26□□□□□ -0.13
SCARNA20.5-201ENST00000516991 ZBTB11O95625 1053 aaPredicted RBP14.26□□□□□ -0.13
SCARNA20.5-201ENST00000516991 EBLN1P0CF75 366 aa14.26□□□□□ -0.13
SCARNA20.5-201ENST00000516991 NR1D1P20393 614 aa14.26□□□□□ -0.13
SCARNA20.5-201ENST00000516991 NDUFS1P28331 727 aa14.26□□□□□ -0.13
SCARNA20.5-201ENST00000516991 PTPN4P29074 926 aa14.26□□□□□ -0.13
SCARNA20.5-201ENST00000516991 RPS15P62841 145 aaKnown RBP14.26□□□□□ -0.13
SCARNA20.5-201ENST00000516991 TUBB4BP68371 445 aa14.26□□□□□ -0.13
SCARNA20.5-201ENST00000516991 SEMA5AQ13591 1074 aa14.26□□□□□ -0.13
SCARNA20.5-201ENST00000516991 TUBB2AQ13885 445 aa14.26□□□□□ -0.13
SCARNA20.5-201ENST00000516991 KCNAB1Q14722 419 aa14.26□□□□□ -0.13
SCARNA20.5-201ENST00000516991 UGT8Q16880 541 aa14.26□□□□□ -0.13
SCARNA20.5-201ENST00000516991 BCL7AQ4VC05 210 aa14.26□□□□□ -0.13
SCARNA20.5-201ENST00000516991 FNBP1LQ5T0N5 605 aa14.26□□□□□ -0.13
SCARNA20.5-201ENST00000516991 TMTC4Q5T4D3 741 aa14.26□□□□□ -0.13
SCARNA20.5-201ENST00000516991 ITPRIPL1Q6GPH6 555 aa14.26□□□□□ -0.13
SCARNA20.5-201ENST00000516991 RCOR2Q8IZ40 523 aa14.26□□□□□ -0.13
SCARNA20.5-201ENST00000516991 D2HGDHQ8N465 521 aa14.26□□□□□ -0.13
SCARNA20.5-201ENST00000516991 FAM26EQ8N5C1 309 aa14.26□□□□□ -0.13
SCARNA20.5-201ENST00000516991 OR2L2Q8NH16 312 aa14.26□□□□□ -0.13
SCARNA20.5-201ENST00000516991 C12orf66Q96MD2 445 aa14.26□□□□□ -0.13
SCARNA20.5-201ENST00000516991 TUBB2BQ9BVA1 445 aa14.26□□□□□ -0.13
SCARNA20.5-201ENST00000516991 GBA3Q9H227 469 aa14.26□□□□□ -0.13
SCARNA20.5-201ENST00000516991 KIR3DX1Q9H7L2 352 aa14.26□□□□□ -0.13
SCARNA20.5-201ENST00000516991 LATS2Q9NRM7 1088 aa14.26□□□□□ -0.13
SCARNA20.5-201ENST00000516991 HRASLS2Q9NWW9 162 aa14.26□□□□□ -0.13
SCARNA20.5-201ENST00000516991 TLK1Q9UKI8 766 aa14.26□□□□□ -0.13
SCARNA20.5-201ENST00000516991 PLAAQ9Y263 795 aa14.26□□□□□ -0.13
SCARNA20.5-201ENST00000516991 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.26□□□□□ -0.13
SCARNA20.5-201ENST00000516991 HEBP2Q9Y5Z4 205 aa14.26□□□□□ -0.13
SCARNA20.5-201ENST00000516991 RP1L1Q8IWN7 2480 aaPredicted RBP14.26□□□□□ -0.13
SCARNA20.5-201ENST00000516991 SPTAN1Q13813 2472 aaKnown RBP14.25□□□□□ -0.13
SCARNA20.5-201ENST00000516991 USP9YO00507 2555 aaPredicted RBP14.25□□□□□ -0.13
SCARNA20.5-201ENST00000516991 C2orf81A6NN90 581 aa14.25□□□□□ -0.13
SCARNA20.5-201ENST00000516991 F5H423 210 aaPredicted RBP14.25□□□□□ -0.13
SCARNA20.5-201ENST00000516991 MATN2O00339 956 aa14.25□□□□□ -0.13
SCARNA20.5-201ENST00000516991 BUD23O43709 281 aaKnown RBP14.25□□□□□ -0.13
SCARNA20.5-201ENST00000516991 RALBP11234 206 aa14.25□□□□□ -0.13
SCARNA20.5-201ENST00000516991 GP1BBP13224 206 aa14.25□□□□□ -0.13
SCARNA20.5-201ENST00000516991 LPOP22079 712 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms