RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 SLC22A3O75751 556 aa9.53□□□□□ -0.88
VCAN-210ENST00000513960 CYP7B1O75881 506 aa9.53□□□□□ -0.88
VCAN-210ENST00000513960 RHOBTB1O94844 696 aa9.53□□□□□ -0.88
VCAN-210ENST00000513960 ANXA6P08133 673 aa9.53□□□□□ -0.88
VCAN-210ENST00000513960 DGKQP52824 942 aa9.53□□□□□ -0.88
VCAN-210ENST00000513960 RPS3AP61247 264 aaKnown RBP9.53□□□□□ -0.88
VCAN-210ENST00000513960 NDUFA5Q16718 116 aa9.53□□□□□ -0.88
VCAN-210ENST00000513960 MFSD14CQ5VZR4 134 aa9.53□□□□□ -0.88
VCAN-210ENST00000513960 FBXO39Q8N4B4 442 aa9.53□□□□□ -0.88
VCAN-210ENST00000513960 SERPINB11Q96P15 392 aa9.53□□□□□ -0.88
VCAN-210ENST00000513960 UHRF1Q96T88 793 aaPredicted RBP9.53□□□□□ -0.88
VCAN-210ENST00000513960 PRKD2Q9BZL6 878 aa9.53□□□□□ -0.88
VCAN-210ENST00000513960 SMOC2Q9H3U7 446 aa9.53□□□□□ -0.88
VCAN-210ENST00000513960 ABI2Q9NYB9 513 aaPredicted RBP9.53□□□□□ -0.88
VCAN-210ENST00000513960 A0A0U1RQF3 1178 aa9.52□□□□□ -0.88
VCAN-210ENST00000513960 ILVBLA1L0T0 632 aa9.52□□□□□ -0.88
VCAN-210ENST00000513960 E9PAM4 449 aa9.52□□□□□ -0.88
VCAN-210ENST00000513960 ACOX3O15254 700 aa9.52□□□□□ -0.88
VCAN-210ENST00000513960 SEC14L2O76054 403 aa9.52□□□□□ -0.88
VCAN-210ENST00000513960 C1RP00736 705 aa9.52□□□□□ -0.88
VCAN-210ENST00000513960 ALDH2P05091 517 aa9.52□□□□□ -0.88
VCAN-210ENST00000513960 HLA-DQB2P05538 268 aa9.52□□□□□ -0.88
VCAN-210ENST00000513960 TCF3P15923 654 aa9.52□□□□□ -0.88
VCAN-210ENST00000513960 CRHBPP24387 322 aa9.52□□□□□ -0.88
VCAN-210ENST00000513960 NR6A1Q15406 480 aa9.52□□□□□ -0.88
VCAN-210ENST00000513960 PYCR3Q53H96 274 aa9.52□□□□□ -0.88
VCAN-210ENST00000513960 SPATC1Q76KD6 591 aa9.52□□□□□ -0.88
VCAN-210ENST00000513960 LRRC49Q8IUZ0 686 aa9.52□□□□□ -0.88
VCAN-210ENST00000513960 DCP1BQ8IZD4 617 aaKnown RBP9.52□□□□□ -0.88
VCAN-210ENST00000513960 EID3Q8N140 333 aa9.52□□□□□ -0.88
VCAN-210ENST00000513960 TMEM151AQ8N4L1 468 aa9.52□□□□□ -0.88
VCAN-210ENST00000513960 CDC26Q8NHZ8 85 aa9.52□□□□□ -0.88
VCAN-210ENST00000513960 FRS2Q8WU20 508 aa9.52□□□□□ -0.88
VCAN-210ENST00000513960 SLC22A17Q8WUG5 538 aa9.52□□□□□ -0.88
VCAN-210ENST00000513960 MAELQ96JY0 434 aaKnown RBP9.52□□□□□ -0.88
VCAN-210ENST00000513960 DHRS1Q96LJ7 313 aa9.52□□□□□ -0.88
VCAN-210ENST00000513960 UROC1Q96N76 676 aa9.52□□□□□ -0.88
VCAN-210ENST00000513960 ADGRE2Q9UHX3 823 aa9.52□□□□□ -0.88
VCAN-210ENST00000513960 BOLA1Q9Y3E2 137 aa9.52□□□□□ -0.88
VCAN-210ENST00000513960 TRIM64CA6NLI5 447 aa9.52□□□□□ -0.89
VCAN-210ENST00000513960 BCKDKO14874 412 aa9.52□□□□□ -0.89
VCAN-210ENST00000513960 CACNG3O60359 315 aa9.52□□□□□ -0.89
VCAN-210ENST00000513960 POLR2JP52435 117 aaKnown RBP9.52□□□□□ -0.89
VCAN-210ENST00000513960 IFITM3Q01628 133 aa9.52□□□□□ -0.89
VCAN-210ENST00000513960 FAM214AQ32MH5 1076 aa9.52□□□□□ -0.89
VCAN-210ENST00000513960 C17orf99Q6UX52 265 aa9.52□□□□□ -0.89
VCAN-210ENST00000513960 AHSA2Q719I0 299 aa9.52□□□□□ -0.89
VCAN-210ENST00000513960 SPRED1Q7Z699 444 aa9.52□□□□□ -0.89
VCAN-210ENST00000513960 TFAP2DQ7Z6R9 452 aa9.52□□□□□ -0.89
VCAN-210ENST00000513960 RTL3Q8N8U3 475 aaKnown RBP9.52□□□□□ -0.89
VCAN-210ENST00000513960 CDK15Q96Q40 435 aa9.52□□□□□ -0.89
VCAN-210ENST00000513960 MYOCQ99972 504 aa9.52□□□□□ -0.89
VCAN-210ENST00000513960 PRRG3Q9BZD7 231 aa9.52□□□□□ -0.89
VCAN-210ENST00000513960 EXOSC4Q9NPD3 245 aaKnown RBP9.52□□□□□ -0.89
VCAN-210ENST00000513960 IGSF5Q9NSI5 407 aa9.52□□□□□ -0.89
VCAN-210ENST00000513960 GMIPQ9P107 970 aa9.52□□□□□ -0.89
VCAN-210ENST00000513960 ANKMY1Q9P2S6 941 aa9.52□□□□□ -0.89
VCAN-210ENST00000513960 POLG2Q9UHN1 485 aa9.52□□□□□ -0.89
VCAN-210ENST00000513960 M0QZQ0 153 aa9.52□□□□□ -0.89
VCAN-210ENST00000513960 IGLV3-25P01717 112 aa9.52□□□□□ -0.89
VCAN-210ENST00000513960 OR4Q2P0C623 313 aa9.52□□□□□ -0.89
VCAN-210ENST00000513960 IMPDH1P20839 514 aa9.52□□□□□ -0.89
VCAN-210ENST00000513960 DNAJB1P25685 340 aa9.52□□□□□ -0.89
VCAN-210ENST00000513960 GSTM2P28161 218 aa9.52□□□□□ -0.89
VCAN-210ENST00000513960 WNT3AP56704 352 aa9.52□□□□□ -0.89
VCAN-210ENST00000513960 EPS8Q12929 822 aa9.52□□□□□ -0.89
VCAN-210ENST00000513960 TUBA3CQ13748 450 aa9.52□□□□□ -0.89
VCAN-210ENST00000513960 PTPRCAPQ14761 206 aa9.52□□□□□ -0.89
VCAN-210ENST00000513960 NPTX1Q15818 432 aa9.52□□□□□ -0.89
VCAN-210ENST00000513960 SLC39A12Q504Y0 691 aa9.52□□□□□ -0.89
VCAN-210ENST00000513960 GCNT7Q6ZNI0 430 aa9.52□□□□□ -0.89
VCAN-210ENST00000513960 LARP4Q71RC2 724 aaKnown RBP eCLIP9.52□□□□□ -0.89
VCAN-210ENST00000513960 OR10A6Q8NH74 314 aa9.52□□□□□ -0.89
VCAN-210ENST00000513960 STON2Q8WXE9 905 aa9.52□□□□□ -0.89
VCAN-210ENST00000513960 KLHL5Q96PQ7 755 aa9.52□□□□□ -0.89
VCAN-210ENST00000513960 GSTO2Q9H4Y5 243 aa9.52□□□□□ -0.89
VCAN-210ENST00000513960 MAGEE1Q9HCI5 957 aa9.52□□□□□ -0.89
VCAN-210ENST00000513960 NDFIP2Q9NV92 336 aa9.52□□□□□ -0.89
VCAN-210ENST00000513960 CD274Q9NZQ7 290 aa9.52□□□□□ -0.89
VCAN-210ENST00000513960 B3GNT3Q9Y2A9 372 aa9.52□□□□□ -0.89
VCAN-210ENST00000513960 A0A1W2PQH9 124 aa9.51□□□□□ -0.89
VCAN-210ENST00000513960 MGEA5O60502 916 aa9.51□□□□□ -0.89
VCAN-210ENST00000513960 JRKO75564 520 aa9.51□□□□□ -0.89
VCAN-210ENST00000513960 CDK14O94921 469 aa9.51□□□□□ -0.89
VCAN-210ENST00000513960 CCDC159P0C7I6 412 aa9.51□□□□□ -0.89
VCAN-210ENST00000513960 HOXD11P31277 338 aaPredicted RBP9.51□□□□□ -0.89
VCAN-210ENST00000513960 PIGAP37287 484 aa9.51□□□□□ -0.89
VCAN-210ENST00000513960 PIK3CGP48736 1102 aa9.51□□□□□ -0.89
VCAN-210ENST00000513960 RENBPP51606 427 aa9.51□□□□□ -0.89
VCAN-210ENST00000513960 DEFA1P59665 94 aa9.51□□□□□ -0.89
VCAN-210ENST00000513960 DEFA3P59666 94 aa9.51□□□□□ -0.89
VCAN-210ENST00000513960 UNC50Q53HI1 259 aa9.51□□□□□ -0.89
VCAN-210ENST00000513960 RBM48Q5RL73 367 aaKnown RBP9.51□□□□□ -0.89
VCAN-210ENST00000513960 AGAP7PQ5VUJ5 663 aa9.51□□□□□ -0.89
VCAN-210ENST00000513960 DENND5AQ6IQ26 1287 aa9.51□□□□□ -0.89
VCAN-210ENST00000513960 DPF3Q92784 378 aa9.51□□□□□ -0.89
VCAN-210ENST00000513960 TMEM125Q96AQ2 219 aa9.51□□□□□ -0.89
VCAN-210ENST00000513960 SLC47A1Q96FL8 570 aa9.51□□□□□ -0.89
VCAN-210ENST00000513960 ZNF486Q96H40 463 aaPredicted RBP9.51□□□□□ -0.89
VCAN-210ENST00000513960 SUSD3Q96L08 255 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms