RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 EDEM2Q9BV94 578 aa5.33□□□□□ -1.56
PROM1-211ENST00000511153 NUSAP1Q9BXS6 441 aaKnown RBP5.33□□□□□ -1.56
PROM1-211ENST00000511153 FRMD8Q9BZ67 464 aaPredicted RBP5.33□□□□□ -1.56
PROM1-211ENST00000511153 CAB39LQ9H9S4 337 aa5.33□□□□□ -1.56
PROM1-211ENST00000511153 KLC4Q9NSK0 619 aa5.33□□□□□ -1.56
PROM1-211ENST00000511153 GULP1Q9UBP9 304 aa5.33□□□□□ -1.56
PROM1-211ENST00000511153 CTNNAL1Q9UBT7 734 aa5.33□□□□□ -1.56
PROM1-211ENST00000511153 APOBEC3BQ9UH17 382 aaKnown RBP5.33□□□□□ -1.56
PROM1-211ENST00000511153 APPL1Q9UKG1 709 aa5.33□□□□□ -1.56
PROM1-211ENST00000511153 FBXO5Q9UKT4 447 aa5.33□□□□□ -1.56
PROM1-211ENST00000511153 SLC6A14Q9UN76 642 aa5.33□□□□□ -1.56
PROM1-211ENST00000511153 BTBD3Q9Y2F9 522 aa5.33□□□□□ -1.56
PROM1-211ENST00000511153 ST14Q9Y5Y6 855 aa5.33□□□□□ -1.56
PROM1-211ENST00000511153 FAM169AQ9Y6X4 670 aa5.33□□□□□ -1.56
PROM1-211ENST00000511153 PCDH15Q96QU1 1955 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 SPTY2D1-AS1A0A0U1RR47 76 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 TLDC2A0PJX2 215 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 ANKRD33BA6NCL7 494 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 PDZK1P1A8MUH7 402 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 C10orf142B7Z368 130 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 GRID2O43424 1007 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 SGTAO43765 313 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 POP7O75817 140 aaKnown RBP5.32□□□□□ -1.56
PROM1-211ENST00000511153 TNFP01375 233 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 CHRM3P20309 590 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 TRIM23P36406 574 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 ACTR1BP42025 376 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 HK3P52790 923 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 CDKN2DP55273 166 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 MAZP56270 477 aaKnown RBP5.32□□□□□ -1.56
PROM1-211ENST00000511153 CLDN6P56747 220 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 ACTR1AP61163 376 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 PDE1BQ01064 536 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 CTBSQ01459 385 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 ACVR1Q04771 509 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 DPTQ07507 201 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 MGAT5Q09328 741 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 ITGA9Q13797 1035 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 SLMAPQ14BN4 828 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 CTSL3PQ5NE16 218 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 TEDDM1Q5T9Z0 273 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 STEAP4Q687X5 459 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 ZNF787Q6DD87 383 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 KIAA0930Q6ICG6 404 aaPredicted RBP5.32□□□□□ -1.56
PROM1-211ENST00000511153 C16orf46Q6P387 395 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 MACC1Q6ZN28 852 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 LRRC69Q6ZNQ3 347 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 ZNF765Q7L2R6 523 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 NLRP9Q7RTR0 991 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 STRA8Q7Z7C7 330 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 TMEM135Q86UB9 458 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 PARGQ86W56 976 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 CILP2Q8IUL8 1156 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 CFAP206Q8IYR0 622 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 GPR161Q8N6U8 529 aaKnown RBP5.32□□□□□ -1.56
PROM1-211ENST00000511153 SIDT2Q8NBJ9 832 aaKnown RBP5.32□□□□□ -1.56
PROM1-211ENST00000511153 PHC3Q8NDX5 983 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 DENND6BQ8NEG7 585 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 GSDMBQ8TAX9 411 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 SKA2Q8WVK7 121 aaPredicted RBP5.32□□□□□ -1.56
PROM1-211ENST00000511153 ELMO1Q92556 727 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.32□□□□□ -1.56
PROM1-211ENST00000511153 COX14Q96I36 57 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 OR2M4Q96R27 311 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 SRPK1Q96SB4 655 aaKnown RBP5.32□□□□□ -1.56
PROM1-211ENST00000511153 ELF4Q99607 663 aaPredicted RBP5.32□□□□□ -1.56
PROM1-211ENST00000511153 SLC30A3Q99726 388 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 LRRC61Q9BV99 259 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 SLC13A1Q9BZW2 595 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 CLPBQ9H078 707 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 PCED1AQ9H1Q7 454 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 SYNDIG1Q9H7V2 258 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 MRM3Q9HC36 420 aaKnown RBP5.32□□□□□ -1.56
PROM1-211ENST00000511153 CAPN10Q9HC96 672 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 TRIM39Q9HCM9 518 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 PRDM8Q9NQV8 689 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 RAD18Q9NS91 495 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 SPATS2LQ9NUQ6 558 aaKnown RBP5.32□□□□□ -1.56
PROM1-211ENST00000511153 ABCF3Q9NUQ8 709 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 ZDHHC3Q9NYG2 299 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 ZFATQ9P243 1243 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 SUSD2Q9UGT4 822 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 TBK1Q9UHD2 729 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 MTO1Q9Y2Z2 717 aaKnown RBP5.32□□□□□ -1.56
PROM1-211ENST00000511153 DYRK1BQ9Y463 629 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 HS3ST3A1Q9Y663 406 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 CFAP54Q96N23 3096 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 DMXL1Q9Y485 3027 aa5.32□□□□□ -1.56
PROM1-211ENST00000511153 ARID1BQ8NFD5 2236 aaPredicted RBP5.31□□□□□ -1.56
PROM1-211ENST00000511153 ASXL3Q9C0F0 2248 aa5.31□□□□□ -1.56
PROM1-211ENST00000511153 FAM186AA6NE01 2351 aa5.31□□□□□ -1.56
PROM1-211ENST00000511153 A0A1W2PNR3 127 aa5.31□□□□□ -1.56
PROM1-211ENST00000511153 MAGEB16A2A368 324 aa5.31□□□□□ -1.56
PROM1-211ENST00000511153 RGSL1A5PLK6 1076 aa5.31□□□□□ -1.56
PROM1-211ENST00000511153 OR52A4PA6NMU1 304 aa5.31□□□□□ -1.56
PROM1-211ENST00000511153 AP3B1O00203 1094 aa5.31□□□□□ -1.56
PROM1-211ENST00000511153 TRIM38O00635 465 aa5.31□□□□□ -1.56
PROM1-211ENST00000511153 RIPK2O43353 540 aa5.31□□□□□ -1.56
PROM1-211ENST00000511153 SH3BP5O60239 455 aa5.31□□□□□ -1.56
PROM1-211ENST00000511153 NUAK1O60285 661 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms