RNA–Protein interactions for RNA: ENST00000509354.1

TRIO-213, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 801 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-213ENST00000509354 NOD2Q9HC29 1040 aa7.22□□□□□ -1.25
TRIO-213ENST00000509354 SEPT10Q9P0V9 454 aa7.22□□□□□ -1.25
TRIO-213ENST00000509354 B4GALT6Q9UBX8 382 aa7.22□□□□□ -1.25
TRIO-213ENST00000509354 HS3ST3A1Q9Y663 406 aa7.22□□□□□ -1.25
TRIO-213ENST00000509354 U3KQA8 63 aa7.22□□□□□ -1.25
TRIO-213ENST00000509354 URB1O60287 2271 aaKnown RBP7.22□□□□□ -1.25
TRIO-213ENST00000509354 ZNF106Q9H2Y7 1883 aaKnown RBP7.21□□□□□ -1.25
TRIO-213ENST00000509354 IQANK1A0A1B0GTG1 560 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 TLDC2A0PJX2 215 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 TMEM120BA0PK00 339 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 NPIPB15A6NHN6 443 aaPredicted RBP7.21□□□□□ -1.26
TRIO-213ENST00000509354 K7ESM1 405 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 CASC3O15234 703 aaKnown RBP7.21□□□□□ -1.26
TRIO-213ENST00000509354 TM9SF1O15321 606 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 HTRA2O43464 458 aaPredicted RBP7.21□□□□□ -1.26
TRIO-213ENST00000509354 FZD6O60353 706 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 SOCS5O75159 536 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 MT-CYBP00156 380 aaPredicted RBP7.21□□□□□ -1.26
TRIO-213ENST00000509354 PRLP01236 227 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 CSF2P04141 144 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 SNRPAP09012 282 aaKnown RBP7.21□□□□□ -1.26
TRIO-213ENST00000509354 ELFN1P0C7U0 828 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 BRAFP15056 766 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 CHN1P15882 459 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 CTPS1P17812 591 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 HLA-DPA1P20036 260 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 LHCGRP22888 699 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 ADRA1DP25100 572 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 ADH6P28332 368 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 POLD2P49005 469 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 THOP1P52888 689 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 CSE1LP55060 971 aaKnown RBP7.21□□□□□ -1.26
TRIO-213ENST00000509354 WNT3AP56704 352 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 GUCY1A3Q02108 690 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 DSC2Q02487 901 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 MGAT5Q09328 741 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 ILF2Q12905 390 aaKnown RBP7.21□□□□□ -1.26
TRIO-213ENST00000509354 OLIG2Q13516 323 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 C1orf61Q13536 156 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 GRM3Q14832 879 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 LRRC14Q15048 493 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 SLC1A5Q15758 541 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 DEFB133Q30KQ1 61 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 HP1BP3Q5SSJ5 553 aaPredicted RBP7.21□□□□□ -1.26
TRIO-213ENST00000509354 CERCAMQ5T4B2 595 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 TEDDM1Q5T9Z0 273 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 HES3Q5TGS1 186 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 KIAA0930Q6ICG6 404 aaPredicted RBP7.21□□□□□ -1.26
TRIO-213ENST00000509354 ERAP2Q6P179 960 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 LIPIQ6XZB0 460 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 MACC1Q6ZN28 852 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 TMPRSS7Q7RTY8 843 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 ZNF438Q7Z4V0 828 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 TSPAN33Q86UF1 283 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 ATCAYQ86WG3 371 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 PHACTR4Q8IZ21 702 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 MDM1Q8TC05 714 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 LMX1AQ8TE12 382 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 CKAP2Q8WWK9 683 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 ASB12Q8WXK4 309 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 TSACCQ96A04 125 aaPredicted RBP7.21□□□□□ -1.26
TRIO-213ENST00000509354 PDXPQ96GD0 296 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 NUDCD1Q96RS6 583 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 CPNE1Q99829 537 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 TRIM56Q9BRZ2 755 aaKnown RBP7.21□□□□□ -1.26
TRIO-213ENST00000509354 LRRC61Q9BV99 259 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 RBCK1Q9BYM8 510 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 TRABDQ9H4I3 376 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 APOBEC3BQ9UH17 382 aaKnown RBP7.21□□□□□ -1.26
TRIO-213ENST00000509354 GDF2Q9UK05 429 aaPredicted RBP7.21□□□□□ -1.26
TRIO-213ENST00000509354 TCAF1Q9Y4C2 921 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 OR1A2Q9Y585 309 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 IGSF10Q6WRI0 2623 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 PTPRQQ9UMZ3 2332 aa7.21□□□□□ -1.26
TRIO-213ENST00000509354 SMG1Q96Q15 3661 aaKnown RBP7.2□□□□□ -1.26
TRIO-213ENST00000509354 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.2□□□□□ -1.26
TRIO-213ENST00000509354 A0A1W2PPM1 405 aa7.2□□□□□ -1.26
TRIO-213ENST00000509354 FAM221BA6H8Z2 402 aa7.2□□□□□ -1.26
TRIO-213ENST00000509354 POC1B-GALNT4F8VUJ3 575 aa7.2□□□□□ -1.26
TRIO-213ENST00000509354 AQP9O43315 295 aa7.2□□□□□ -1.26
TRIO-213ENST00000509354 LDB2O43679 373 aa7.2□□□□□ -1.26
TRIO-213ENST00000509354 USP12O75317 370 aa7.2□□□□□ -1.26
TRIO-213ENST00000509354 RECQL5O94762 991 aaPredicted RBP7.2□□□□□ -1.26
TRIO-213ENST00000509354 WISP3O95389 354 aaPredicted RBP7.2□□□□□ -1.26
TRIO-213ENST00000509354 FAM107AO95990 144 aa7.2□□□□□ -1.26
TRIO-213ENST00000509354 FGF1P05230 155 aa7.2□□□□□ -1.26
TRIO-213ENST00000509354 PDHA1P08559 390 aa7.2□□□□□ -1.26
TRIO-213ENST00000509354 ALPIP09923 528 aa7.2□□□□□ -1.26
TRIO-213ENST00000509354 ARAFP10398 606 aa7.2□□□□□ -1.26
TRIO-213ENST00000509354 CKMT2P17540 419 aa7.2□□□□□ -1.26
TRIO-213ENST00000509354 VIPR1P32241 457 aa7.2□□□□□ -1.26
TRIO-213ENST00000509354 HPDP32754 393 aaPredicted RBP7.2□□□□□ -1.26
TRIO-213ENST00000509354 CRHR1P34998 444 aa7.2□□□□□ -1.26
TRIO-213ENST00000509354 SUOXP51687 545 aa7.2□□□□□ -1.26
TRIO-213ENST00000509354 SESN2P58004 480 aaPredicted RBP7.2□□□□□ -1.26
TRIO-213ENST00000509354 HNRNPKP61978 463 aaKnown RBP eCLIP7.2□□□□□ -1.26
TRIO-213ENST00000509354 CRADDP78560 199 aa7.2□□□□□ -1.26
TRIO-213ENST00000509354 DAB2P98082 770 aa7.2□□□□□ -1.26
TRIO-213ENST00000509354 SRSF11Q05519 484 aaKnown RBP7.2□□□□□ -1.26
TRIO-213ENST00000509354 MTM1Q13496 603 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms