RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 SLCO1B1Q9Y6L6 691 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 DGKBQ9Y6T7 804 aa7.09□□□□□ -1.27
NUP54-204ENST00000506098 DNAH14Q0VDD8 3507 aa7.09□□□□□ -1.28
NUP54-204ENST00000506098 CROCCQ5TZA2 2017 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 A0A087X1B8 175 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 A0A1B0GTW7 788 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 SLC5A10A0PJK1 596 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 OR2AG2A6NM03 316 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 IQCF5A8MTL0 148 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 PRR5-ARHGAP8B1AHC4 643 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 E5RI56 91 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 TPP1O14773 563 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 VILLO15195 856 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 BCAT2O15382 392 aaPredicted RBP7.08□□□□□ -1.28
NUP54-204ENST00000506098 GRID2O43424 1007 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 GPC4O75487 556 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 SLCO2B1O94956 709 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 ASMTLO95671 621 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 MT-ND3P03897 115 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 C2P06681 752 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 GSTA1P08263 222 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 THEGLP0DJG4 465 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 CBSLP0DN79 551 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 ZNF37AP17032 561 aaPredicted RBP7.08□□□□□ -1.28
NUP54-204ENST00000506098 CHRM3P20309 590 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 ITPKAP23677 461 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 MAOBP27338 520 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 HTR1BP28222 390 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 CCR7P32248 378 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 HOXD12P35452 270 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 CBSP35520 551 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 CLCNKAP51800 687 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 THOP1P52888 689 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 SLC12A2P55011 1212 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 ARHGAP8P85298 464 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 PLOD1Q02809 727 aaPredicted RBP7.08□□□□□ -1.28
NUP54-204ENST00000506098 GPS2Q13227 327 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 SRSF5Q13243 272 aaKnown RBP7.08□□□□□ -1.28
NUP54-204ENST00000506098 PDAP1Q13442 181 aaKnown RBP7.08□□□□□ -1.28
NUP54-204ENST00000506098 TMED1Q13445 227 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 BIRC2Q13490 618 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 PDCD2Q16342 344 aaPredicted RBP7.08□□□□□ -1.28
NUP54-204ENST00000506098 INSCQ1MX18 579 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 TPRG1LQ5T0D9 272 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 LYSMD4Q5XG99 296 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 ENPP7Q6UWV6 458 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 TMEM207Q6UWW9 146 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 XKR5Q6UX68 686 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 NEK10Q6ZWH5 1172 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 DET1Q7L5Y6 550 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 CMC1Q7Z7K0 106 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 CLEC14AQ86T13 490 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 RGL4Q8IZJ4 473 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 KRT222Q8N1A0 295 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 BANPQ8N9N5 519 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 OR2L2Q8NH16 312 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 GIMAP7Q8NHV1 300 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 LKAAEAR1Q8TD35 194 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 INPP5DQ92835 1189 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 LOXL4Q96JB6 756 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 GPR21Q99679 349 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 SLC30A3Q99726 388 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 PRRX2Q99811 253 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 TIMM29Q9BSF4 260 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 LRFN3Q9BTN0 628 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 CAB39LQ9H9S4 337 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 FGF22Q9HCT0 170 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 AASDHPPTQ9NRN7 309 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 CHCHD3Q9NX63 227 aaKnown RBP7.08□□□□□ -1.28
NUP54-204ENST00000506098 FAM53CQ9NYF3 392 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 PILRBQ9UKJ0 227 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 PNMA8BQ9ULN7 279 aaPredicted RBP7.08□□□□□ -1.28
NUP54-204ENST00000506098 NOVA2Q9UNW9 492 aaKnown RBP7.08□□□□□ -1.28
NUP54-204ENST00000506098 CDYLQ9Y232 598 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 ACOT9Q9Y305 439 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 PCYT1BQ9Y5K3 369 aaPredicted RBP7.08□□□□□ -1.28
NUP54-204ENST00000506098 VPS13AQ96RL7 3174 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 CUL9Q8IWT3 2517 aa7.08□□□□□ -1.28
NUP54-204ENST00000506098 A0A096LPK6 155 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 MGAT4DA6NG13 374 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 FOXO6A8MYZ6 492 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 TLR4O00206 839 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 LIN7AO14910 233 aaPredicted RBP7.07□□□□□ -1.28
NUP54-204ENST00000506098 PRPF4O43172 522 aaKnown RBP eCLIP7.07□□□□□ -1.28
NUP54-204ENST00000506098 PHGDHO43175 533 aaKnown RBP7.07□□□□□ -1.28
NUP54-204ENST00000506098 TPD52L2O43399 206 aaKnown RBP7.07□□□□□ -1.28
NUP54-204ENST00000506098 TYROBPO43914 113 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 POP7O75817 140 aaKnown RBP7.07□□□□□ -1.28
NUP54-204ENST00000506098 KLHL2O95198 593 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 TRIM16O95361 564 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 TSPAN12O95859 305 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 TNFP01375 233 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 MPC1LP0DKB6 136 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 PYGBP11216 843 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 ENO3P13929 434 aaPredicted RBP7.07□□□□□ -1.28
NUP54-204ENST00000506098 GNSP15586 552 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 CREB1P16220 341 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 KRT4P19013 534 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 DGKAP23743 735 aa7.07□□□□□ -1.28
NUP54-204ENST00000506098 CRHR1P34998 444 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms