RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 SGK2Q9HBY8 427 aa10.22□□□□□ -0.77
TPM3-217ENST00000504663 SYTL2Q9HCH5 934 aa10.22□□□□□ -0.77
TPM3-217ENST00000504663 TRIM39Q9HCM9 518 aa10.22□□□□□ -0.77
TPM3-217ENST00000504663 SARS2Q9NP81 518 aaKnown RBP10.22□□□□□ -0.77
TPM3-217ENST00000504663 POLMQ9NP87 494 aaPredicted RBP10.22□□□□□ -0.77
TPM3-217ENST00000504663 ACSS2Q9NR19 701 aa10.22□□□□□ -0.77
TPM3-217ENST00000504663 GPR27Q9NS67 375 aa10.22□□□□□ -0.77
TPM3-217ENST00000504663 ADAMTS6Q9UKP5 1117 aa10.22□□□□□ -0.77
TPM3-217ENST00000504663 PNMA8BQ9ULN7 279 aaPredicted RBP10.22□□□□□ -0.77
TPM3-217ENST00000504663 CYP8B1Q9UNU6 501 aa10.22□□□□□ -0.77
TPM3-217ENST00000504663 CA5BQ9Y2D0 317 aa10.22□□□□□ -0.77
TPM3-217ENST00000504663 TP53BP1Q12888 1972 aaPredicted RBP10.22□□□□□ -0.77
TPM3-217ENST00000504663 CEP192Q8TEP8 1941 aa10.21□□□□□ -0.77
TPM3-217ENST00000504663 GMNCA6NCL1 334 aa10.21□□□□□ -0.77
TPM3-217ENST00000504663 PRR23AA6NEV1 266 aa10.21□□□□□ -0.77
TPM3-217ENST00000504663 POM121BA6NF01 834 aa10.21□□□□□ -0.77
TPM3-217ENST00000504663 E5RI56 91 aa10.21□□□□□ -0.77
TPM3-217ENST00000504663 UBXN8O00124 270 aa10.21□□□□□ -0.77
TPM3-217ENST00000504663 EIF3FO00303 357 aaPredicted RBP10.21□□□□□ -0.77
TPM3-217ENST00000504663 PI15O43692 258 aa10.21□□□□□ -0.77
TPM3-217ENST00000504663 LYPLA1O75608 230 aaPredicted RBP10.21□□□□□ -0.77
TPM3-217ENST00000504663 SLCO2B1O94956 709 aa10.21□□□□□ -0.77
TPM3-217ENST00000504663 SEMA4FO95754 770 aa10.21□□□□□ -0.77
TPM3-217ENST00000504663 APOA4P06727 396 aa10.21□□□□□ -0.77
TPM3-217ENST00000504663 RBP1P09455 135 aa10.21□□□□□ -0.77
TPM3-217ENST00000504663 MYCLP1P12525 358 aaPredicted RBP10.21□□□□□ -0.77
TPM3-217ENST00000504663 MAT2AP31153 395 aaKnown RBP10.21□□□□□ -0.77
TPM3-217ENST00000504663 CCR10P46092 362 aa10.21□□□□□ -0.77
TPM3-217ENST00000504663 CCR5P51681 352 aa10.21□□□□□ -0.77
TPM3-217ENST00000504663 DNAJB13P59910 316 aa10.21□□□□□ -0.77
TPM3-217ENST00000504663 PFN3P60673 137 aa10.21□□□□□ -0.77
TPM3-217ENST00000504663 INPP5AQ14642 412 aa10.21□□□□□ -0.77
TPM3-217ENST00000504663 PHKG1Q16816 387 aa10.21□□□□□ -0.77
TPM3-217ENST00000504663 ZXDCQ2QGD7 858 aaPredicted RBP10.21□□□□□ -0.77
TPM3-217ENST00000504663 TUBB8Q3ZCM7 444 aa10.21□□□□□ -0.77
TPM3-217ENST00000504663 PLEKHS1Q5SXH7 462 aa10.21□□□□□ -0.77
TPM3-217ENST00000504663 TMEM220Q6QAJ8 160 aa10.21□□□□□ -0.77
TPM3-217ENST00000504663 FAM83HQ6ZRV2 1179 aaPredicted RBP10.21□□□□□ -0.77
TPM3-217ENST00000504663 TSTD1Q8NFU3 115 aa10.21□□□□□ -0.77
TPM3-217ENST00000504663 GANCQ8TET4 914 aa10.21□□□□□ -0.77
TPM3-217ENST00000504663 DYDC1Q8WWB3 177 aa10.21□□□□□ -0.77
TPM3-217ENST00000504663 FOXJ1Q92949 421 aa10.21□□□□□ -0.77
TPM3-217ENST00000504663 SCARF2Q96GP6 870 aaPredicted RBP10.21□□□□□ -0.77
TPM3-217ENST00000504663 BMFQ96LC9 184 aa10.21□□□□□ -0.77
TPM3-217ENST00000504663 PANX3Q96QZ0 392 aa10.21□□□□□ -0.77
TPM3-217ENST00000504663 FAM126AQ9BYI3 521 aaPredicted RBP10.21□□□□□ -0.77
TPM3-217ENST00000504663 TPSD1Q9BZJ3 242 aa10.21□□□□□ -0.77
TPM3-217ENST00000504663 BTBD1Q9H0C5 482 aa10.21□□□□□ -0.77
TPM3-217ENST00000504663 CAAP1Q9H8G2 361 aa10.21□□□□□ -0.77
TPM3-217ENST00000504663 MANSC1Q9H8J5 431 aa10.21□□□□□ -0.77
TPM3-217ENST00000504663 FGFR1OP2Q9NVK5 253 aa10.21□□□□□ -0.77
TPM3-217ENST00000504663 NCKAP1Q9Y2A7 1128 aa10.21□□□□□ -0.77
TPM3-217ENST00000504663 SLC17A4Q9Y2C5 497 aa10.21□□□□□ -0.77
TPM3-217ENST00000504663 TMEM98Q9Y2Y6 226 aa10.21□□□□□ -0.77
TPM3-217ENST00000504663 ASB1Q9Y576 335 aa10.21□□□□□ -0.77
TPM3-217ENST00000504663 OR1A2Q9Y585 309 aa10.21□□□□□ -0.77
TPM3-217ENST00000504663 BDP1A6H8Y1 2624 aa10.2□□□□□ -0.78
TPM3-217ENST00000504663 TBC1D3DA0A087WVF3 549 aa10.2□□□□□ -0.78
TPM3-217ENST00000504663 TBC1D3IA0A087WXS9 549 aa10.2□□□□□ -0.78
TPM3-217ENST00000504663 TBC1D3EA0A087X179 549 aa10.2□□□□□ -0.78
TPM3-217ENST00000504663 TBC1D3KA0A087X1G2 549 aa10.2□□□□□ -0.78
TPM3-217ENST00000504663 CCDC189A1A4V9 331 aa10.2□□□□□ -0.78
TPM3-217ENST00000504663 TBC1D3FA6NER0 549 aaPredicted RBP10.2□□□□□ -0.78
TPM3-217ENST00000504663 LRRC14BA6NHZ5 514 aa10.2□□□□□ -0.78
TPM3-217ENST00000504663 TBC1D3LB9A6J9 549 aa10.2□□□□□ -0.78
TPM3-217ENST00000504663 CFAP99D6REC4 459 aa10.2□□□□□ -0.78
TPM3-217ENST00000504663 H0Y8X5 98 aa10.2□□□□□ -0.78
TPM3-217ENST00000504663 BTN3A1O00481 513 aa10.2□□□□□ -0.78
TPM3-217ENST00000504663 VEGFDO43915 354 aa10.2□□□□□ -0.78
TPM3-217ENST00000504663 MAGEC1O60732 1142 aa10.2□□□□□ -0.78
TPM3-217ENST00000504663 ATG13O75143 517 aa10.2□□□□□ -0.78
TPM3-217ENST00000504663 SERPINE1P05121 402 aa10.2□□□□□ -0.78
TPM3-217ENST00000504663 CEACAM5P06731 702 aa10.2□□□□□ -0.78
TPM3-217ENST00000504663 DCNP07585 359 aaKnown RBP10.2□□□□□ -0.78
TPM3-217ENST00000504663 RPS17P08708 135 aaKnown RBP10.2□□□□□ -0.78
TPM3-217ENST00000504663 HOXC4P09017 264 aaPredicted RBP10.2□□□□□ -0.78
TPM3-217ENST00000504663 TBC1D3HP0C7X1 549 aa10.2□□□□□ -0.78
TPM3-217ENST00000504663 MPC1LP0DKB6 136 aa10.2□□□□□ -0.78
TPM3-217ENST00000504663 CBSLP0DN79 551 aa10.2□□□□□ -0.78
TPM3-217ENST00000504663 MYL2P10916 166 aa10.2□□□□□ -0.78
TPM3-217ENST00000504663 ACADMP11310 421 aa10.2□□□□□ -0.78
TPM3-217ENST00000504663 ATP5F1P24539 256 aaPredicted RBP10.2□□□□□ -0.78
TPM3-217ENST00000504663 CBSP35520 551 aa10.2□□□□□ -0.78
TPM3-217ENST00000504663 KPNA2P52292 529 aaKnown RBP10.2□□□□□ -0.78
TPM3-217ENST00000504663 PRKAA2P54646 552 aa10.2□□□□□ -0.78
TPM3-217ENST00000504663 KIAA1024LP59773 190 aa10.2□□□□□ -0.78
TPM3-217ENST00000504663 IL2P60568 153 aa10.2□□□□□ -0.78
TPM3-217ENST00000504663 DMWDQ09019 674 aa10.2□□□□□ -0.78
TPM3-217ENST00000504663 LIPMQ5VYY2 423 aa10.2□□□□□ -0.78
TPM3-217ENST00000504663 KIAA0895LQ68EN5 471 aa10.2□□□□□ -0.78
TPM3-217ENST00000504663 TBC1D3GQ6DHY5 549 aa10.2□□□□□ -0.78
TPM3-217ENST00000504663 TBC1D3CQ6IPX1 549 aa10.2□□□□□ -0.78
TPM3-217ENST00000504663 UGT3A1Q6NUS8 523 aa10.2□□□□□ -0.78
TPM3-217ENST00000504663 ANKRD12Q6UB98 2062 aa10.2□□□□□ -0.78
TPM3-217ENST00000504663 MAMSTRQ6ZN01 415 aa10.2□□□□□ -0.78
TPM3-217ENST00000504663 FAM47EQ6ZV65 393 aa10.2□□□□□ -0.78
TPM3-217ENST00000504663 PIGWQ7Z7B1 504 aa10.2□□□□□ -0.78
TPM3-217ENST00000504663 NUDCD3Q8IVD9 361 aa10.2□□□□□ -0.78
TPM3-217ENST00000504663 TBC1D3Q8IZP1 549 aaPredicted RBP10.2□□□□□ -0.78
TPM3-217ENST00000504663 FAM160A2Q8N612 972 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms