RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 ATF6P18850 670 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 GNPDA1P46926 289 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 TRPC1P48995 793 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 ST13P50502 369 aaKnown RBP7.31□□□□□ -1.24
PDGFC-203ENST00000502773 POLR2JP52435 117 aaKnown RBP7.31□□□□□ -1.24
PDGFC-203ENST00000502773 TPD52P55327 224 aaPredicted RBP7.31□□□□□ -1.24
PDGFC-203ENST00000502773 TLE2Q04725 743 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 MBTPS1Q14703 1052 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 NR6A1Q15406 480 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 ZNF423Q2M1K9 1284 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 LDLRAP1Q5SW96 308 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 IL23RQ5VWK5 629 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 NEK5Q6P3R8 708 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 C16orf59Q7L2K0 433 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 NATD1Q8N6N6 113 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 GPR152Q8TDT2 470 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 ASZ1Q8WWH4 475 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 PYDC1Q8WXC3 89 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 PPP1R16AQ96I34 528 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 ZNF514Q96K75 400 aaPredicted RBP7.31□□□□□ -1.24
PDGFC-203ENST00000502773 NSMCE2Q96MF7 247 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 ZNF570Q96NI8 536 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 LYSMD1Q96S90 227 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 ATOH8Q96SQ7 321 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 TRIM39Q9HCM9 518 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 DYRK4Q9NR20 520 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 SDR39U1Q9NRG7 319 aaPredicted RBP7.31□□□□□ -1.24
PDGFC-203ENST00000502773 CACNA2D2Q9NY47 1150 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 FKBPLQ9UIM3 349 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 ANAPC2Q9UJX6 822 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 CAPN8A6NHC0 703 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 CXCL14O95715 111 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 TRBC1P01850 177 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 CATP04040 527 aaKnown RBP7.3□□□□□ -1.24
PDGFC-203ENST00000502773 RPN2P04844 631 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 CCL5P13501 91 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 NR1H2P55055 460 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 CCL23P55773 120 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 OLIG2Q13516 323 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 SYTL3Q4VX76 610 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 CTU1Q7Z7A3 348 aaKnown RBP7.3□□□□□ -1.24
PDGFC-203ENST00000502773 SERPINA9Q86WD7 417 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 LSMEM2Q8N112 164 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 GALNT6Q8NCL4 622 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 NCLNQ969V3 563 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 CCDC138Q96M89 665 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 CLSTN3Q9BQT9 956 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 SUV39H2Q9H5I1 410 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 AKTIPQ9H8T0 292 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 POLR3BQ9NW08 1133 aaPredicted RBP7.3□□□□□ -1.24
PDGFC-203ENST00000502773 CFAP97Q9P2B7 532 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 TMEM98Q9Y2Y6 226 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 TRIP12Q14669 1992 aaPredicted RBP7.3□□□□□ -1.24
PDGFC-203ENST00000502773 NT5C1B-RDH14C9J2C7 533 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 K7EPI3 171 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 UBXN8O00124 270 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 AOC2O75106 756 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 STK16O75716 305 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 CDK14O94921 469 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 PRAMEF1O95521 474 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 LDLRP01130 860 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 PRLP01236 227 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 PRKCGP05129 697 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 C8BP07358 591 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 ACPPP15309 386 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 CDKN2DP55273 166 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 ELP6Q0PNE2 266 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 GTF2H2Q13888 395 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 PDK3Q15120 406 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 MYLK3Q32MK0 819 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 GTF2H2CQ6P1K8 395 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 ERICH5Q6P6B1 374 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 NECAB2Q7Z6G3 386 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 FAM217AQ8IXS0 508 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 ALDH16A1Q8IZ83 802 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 TMEM132CQ8N3T6 1108 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 SCAIQ8N9R8 606 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 PNPT1Q8TCS8 783 aaKnown RBP7.3□□□□□ -1.24
PDGFC-203ENST00000502773 CSGALNACT1Q8TDX6 532 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 RDH12Q96NR8 316 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 ZNF385DQ9H6B1 395 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 ARMC1Q9NVT9 282 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 THG1LQ9NWX6 298 aaKnown RBP7.3□□□□□ -1.24
PDGFC-203ENST00000502773 VPS51Q9UID3 782 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 UGDHO60701 494 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 SCELO95171 688 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 CLPTM1O96005 669 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 HMGA1P17096 107 aaKnown RBP7.3□□□□□ -1.24
PDGFC-203ENST00000502773 HOXA9P31269 272 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 IFNA8P32881 189 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 CSKP41240 450 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 FOLH1Q04609 750 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 TOP3AQ13472 1001 aaPredicted RBP7.3□□□□□ -1.24
PDGFC-203ENST00000502773 TBCELQ5QJ74 424 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 INTS11Q5TA45 600 aaKnown RBP7.3□□□□□ -1.24
PDGFC-203ENST00000502773 HID1Q8IV36 788 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 MARVELD2Q8N4S9 558 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 UBTD2Q8WUN7 234 aa7.3□□□□□ -1.24
PDGFC-203ENST00000502773 SKA2Q8WVK7 121 aaPredicted RBP7.3□□□□□ -1.24
PDGFC-203ENST00000502773 PPP1R36Q96LQ0 422 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms