RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 FAM159BA6NKW6 160 aa19.71■□□□□ 0.75
CTSD-206ENST00000497544 AQP9O43315 295 aa19.71■□□□□ 0.75
CTSD-206ENST00000497544 KCNJ13O60928 360 aa19.71■□□□□ 0.75
CTSD-206ENST00000497544 HAUS5O94927 633 aa19.71■□□□□ 0.75
CTSD-206ENST00000497544 ACP5P13686 325 aa19.71■□□□□ 0.75
CTSD-206ENST00000497544 VCLP18206 1134 aa19.71■□□□□ 0.75
CTSD-206ENST00000497544 RPS3P23396 243 aaKnown RBP eCLIP19.71■□□□□ 0.753e-25■■■■■ 33.5
CTSD-206ENST00000497544 DGKAP23743 735 aa19.71■□□□□ 0.75
CTSD-206ENST00000497544 MPP1Q00013 466 aa19.71■□□□□ 0.75
CTSD-206ENST00000497544 CTBSQ01459 385 aa19.71■□□□□ 0.75
CTSD-206ENST00000497544 ILF3Q12906 894 aaKnown RBP eCLIP19.71■□□□□ 0.75
CTSD-206ENST00000497544 SUZ12Q15022 739 aaKnown RBP19.71■□□□□ 0.75
CTSD-206ENST00000497544 SHBQ15464 509 aa19.71■□□□□ 0.75
CTSD-206ENST00000497544 TCEA2Q15560 299 aa19.71■□□□□ 0.75
CTSD-206ENST00000497544 TAF8Q7Z7C8 310 aa19.71■□□□□ 0.75
CTSD-206ENST00000497544 ZNF547Q8IVP9 402 aa19.71■□□□□ 0.75
CTSD-206ENST00000497544 BEND7Q8N7W2 519 aaPredicted RBP19.71■□□□□ 0.75
CTSD-206ENST00000497544 LPGAT1Q92604 370 aa19.71■□□□□ 0.75
CTSD-206ENST00000497544 TSSK1BQ9BXA7 367 aa19.71■□□□□ 0.75
CTSD-206ENST00000497544 GSDMCQ9BYG8 508 aa19.71■□□□□ 0.75
CTSD-206ENST00000497544 TXLNGYQ9BZA5 131 aa19.71■□□□□ 0.75
CTSD-206ENST00000497544 CAAP1Q9H8G2 361 aa19.71■□□□□ 0.75
CTSD-206ENST00000497544 SMYD2Q9NRG4 433 aa19.71■□□□□ 0.75
CTSD-206ENST00000497544 GNPTGQ9UJJ9 305 aa19.71■□□□□ 0.75
CTSD-206ENST00000497544 PCDHB1Q9Y5F3 818 aa19.71■□□□□ 0.75
CTSD-206ENST00000497544 PCYT1BQ9Y5K3 369 aaPredicted RBP19.71■□□□□ 0.75
CTSD-206ENST00000497544 AHSGP02765 367 aa19.7■□□□□ 0.74
CTSD-206ENST00000497544 FTH1P02794 183 aa19.7■□□□□ 0.74
CTSD-206ENST00000497544 F7P08709 466 aaPredicted RBP19.7■□□□□ 0.74
CTSD-206ENST00000497544 EPHA8P29322 1005 aaPredicted RBP19.7■□□□□ 0.74
CTSD-206ENST00000497544 PBLDP30039 288 aaPredicted RBP19.7■□□□□ 0.74
CTSD-206ENST00000497544 PRLHRP49683 370 aa19.7■□□□□ 0.74
CTSD-206ENST00000497544 LRP8Q14114 963 aa19.7■□□□□ 0.74
CTSD-206ENST00000497544 PLA2G4EQ3MJ16 856 aa19.7■□□□□ 0.74
CTSD-206ENST00000497544 KBTBD12Q3ZCT8 623 aa19.7■□□□□ 0.74
CTSD-206ENST00000497544 ZNF789Q5FWF6 425 aa19.7■□□□□ 0.74
CTSD-206ENST00000497544 EMBQ6PCB8 327 aa19.7■□□□□ 0.74
CTSD-206ENST00000497544 CNSTQ6PJW8 725 aa19.7■□□□□ 0.74
CTSD-206ENST00000497544 STRA8Q7Z7C7 330 aa19.7■□□□□ 0.74
CTSD-206ENST00000497544 AMZ2Q86W34 360 aa19.7■□□□□ 0.74
CTSD-206ENST00000497544 SLC26A11Q86WA9 606 aa19.7■□□□□ 0.74
CTSD-206ENST00000497544 GKN2Q86XP6 184 aa19.7■□□□□ 0.74
CTSD-206ENST00000497544 SDR16C5Q8N3Y7 309 aa19.7■□□□□ 0.74
CTSD-206ENST00000497544 PPM1NQ8N819 430 aa19.7■□□□□ 0.74
CTSD-206ENST00000497544 UHMK1Q8TAS1 419 aaKnown RBP19.7■□□□□ 0.74
CTSD-206ENST00000497544 CYTH2Q99418 400 aa19.7■□□□□ 0.74
CTSD-206ENST00000497544 TIMM29Q9BSF4 260 aa19.7■□□□□ 0.74
CTSD-206ENST00000497544 CCM2Q9BSQ5 444 aa19.7■□□□□ 0.74
CTSD-206ENST00000497544 LRRC61Q9BV99 259 aa19.7■□□□□ 0.74
CTSD-206ENST00000497544 P2RY12Q9H244 342 aa19.7■□□□□ 0.74
CTSD-206ENST00000497544 KLC4Q9NSK0 619 aa19.7■□□□□ 0.74
CTSD-206ENST00000497544 DNAAF2Q9NVR5 837 aaKnown RBP19.7■□□□□ 0.74
CTSD-206ENST00000497544 SLC17A6Q9P2U8 582 aa19.7■□□□□ 0.74
CTSD-206ENST00000497544 RABGEF1Q9UJ41 708 aa19.7■□□□□ 0.74
CTSD-206ENST00000497544 PLEKHM1Q9Y4G2 1056 aa19.7■□□□□ 0.74
CTSD-206ENST00000497544 CSNK1G3Q9Y6M4 447 aa19.7■□□□□ 0.74
CTSD-206ENST00000497544 ZFC3H1O60293 1989 aaKnown RBP19.7■□□□□ 0.74
CTSD-206ENST00000497544 ARHGEF17Q96PE2 2063 aaPredicted RBP19.69■□□□□ 0.74
CTSD-206ENST00000497544 A0A087WUV0 522 aaPredicted RBP19.69■□□□□ 0.74
CTSD-206ENST00000497544 KLHL33A6NCF5 533 aa19.69■□□□□ 0.74
CTSD-206ENST00000497544 CXorf49A8MYA2 514 aaPredicted RBP19.69■□□□□ 0.74
CTSD-206ENST00000497544 H3BMM5 538 aa19.69■□□□□ 0.74
CTSD-206ENST00000497544 CDX4O14627 284 aaPredicted RBP19.69■□□□□ 0.74
CTSD-206ENST00000497544 SGTAO43765 313 aa19.69■□□□□ 0.74
CTSD-206ENST00000497544 PIAS1O75925 651 aa19.69■□□□□ 0.74
CTSD-206ENST00000497544 TRIM16O95361 564 aa19.69■□□□□ 0.74
CTSD-206ENST00000497544 ESR1P03372 595 aa19.69■□□□□ 0.74
CTSD-206ENST00000497544 ANXA6P08133 673 aa19.69■□□□□ 0.74
CTSD-206ENST00000497544 ZNF883P0CG24 379 aa19.69■□□□□ 0.74
CTSD-206ENST00000497544 PKMP14618 531 aaKnown RBP19.69■□□□□ 0.74
CTSD-206ENST00000497544 CD151P48509 253 aa19.69■□□□□ 0.74
CTSD-206ENST00000497544 ADARP55265 1226 aaKnown RBP19.69■□□□□ 0.74
CTSD-206ENST00000497544 UAP1L1Q3KQV9 507 aa19.69■□□□□ 0.74
CTSD-206ENST00000497544 MAP9Q49MG5 647 aa19.69■□□□□ 0.74
CTSD-206ENST00000497544 GALNT7Q86SF2 657 aa19.69■□□□□ 0.74
CTSD-206ENST00000497544 GATAD2AQ86YP4 633 aa19.69■□□□□ 0.74
CTSD-206ENST00000497544 ZNF548Q8NEK5 533 aaPredicted RBP19.69■□□□□ 0.74
CTSD-206ENST00000497544 CCL4L1Q8NHW4 92 aa19.69■□□□□ 0.74
CTSD-206ENST00000497544 GPBAR1Q8TDU6 330 aa19.69■□□□□ 0.74
CTSD-206ENST00000497544 UBLCP1Q8WVY7 318 aaPredicted RBP19.69■□□□□ 0.74
CTSD-206ENST00000497544 LINC00615Q96LM1 132 aaPredicted RBP19.69■□□□□ 0.74
CTSD-206ENST00000497544 PANX3Q96QZ0 392 aa19.69■□□□□ 0.74
CTSD-206ENST00000497544 UCKL1Q9NWZ5 548 aa19.69■□□□□ 0.74
CTSD-206ENST00000497544 SLC23A2Q9UGH3 650 aa19.69■□□□□ 0.74
CTSD-206ENST00000497544 KCNK6Q9Y257 313 aa19.69■□□□□ 0.74
CTSD-206ENST00000497544 DNAJC16Q9Y2G8 782 aa19.69■□□□□ 0.74
CTSD-206ENST00000497544 KALRNO60229 2985 aa19.68■□□□□ 0.74
CTSD-206ENST00000497544 C17orf113A0A1B0GUU1 675 aa19.68■□□□□ 0.74
CTSD-206ENST00000497544 MGAT4DA6NG13 374 aa19.68■□□□□ 0.74
CTSD-206ENST00000497544 RIPK2O43353 540 aa19.68■□□□□ 0.74
CTSD-206ENST00000497544 PCDHGA12O60330 932 aa19.68■□□□□ 0.74
CTSD-206ENST00000497544 PRB1P04280 392 aa19.68■□□□□ 0.74
CTSD-206ENST00000497544 GSTM1P09488 218 aa19.68■□□□□ 0.74
CTSD-206ENST00000497544 ITGB6P18564 788 aa19.68■□□□□ 0.74
CTSD-206ENST00000497544 AK4P27144 223 aaPredicted RBP19.68■□□□□ 0.74
CTSD-206ENST00000497544 GABRB3P28472 473 aa19.68■□□□□ 0.74
CTSD-206ENST00000497544 ACTR1BP42025 376 aa19.68■□□□□ 0.74
CTSD-206ENST00000497544 ACTR1AP61163 376 aa19.68■□□□□ 0.74
CTSD-206ENST00000497544 GSTM4Q03013 218 aa19.68■□□□□ 0.74
CTSD-206ENST00000497544 NAB1Q13506 487 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms