RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 AGAP9Q5VTM2 703 aa12.97□□□□□ -0.33
ERCC3-209ENST00000494464 NKAIN2Q5VXU1 208 aa12.97□□□□□ -0.33
ERCC3-209ENST00000494464 DENND5AQ6IQ26 1287 aa12.97□□□□□ -0.33
ERCC3-209ENST00000494464 TMEM71Q6P5X7 295 aa12.97□□□□□ -0.33
ERCC3-209ENST00000494464 WDR74Q6RFH5 385 aaPredicted RBP12.97□□□□□ -0.33
ERCC3-209ENST00000494464 WASH2PQ6VEQ5 465 aa12.97□□□□□ -0.33
ERCC3-209ENST00000494464 USP53Q70EK8 1073 aa12.97□□□□□ -0.33
ERCC3-209ENST00000494464 ZNF761Q86XN6 746 aaPredicted RBP12.97□□□□□ -0.33
ERCC3-209ENST00000494464 TRAPPC5Q8IUR0 188 aa12.97□□□□□ -0.33
ERCC3-209ENST00000494464 FAM71DQ8N9W8 422 aa12.97□□□□□ -0.33
ERCC3-209ENST00000494464 NAF1Q96HR8 494 aaKnown RBP12.97□□□□□ -0.33
ERCC3-209ENST00000494464 TTC25Q96NG3 672 aa12.97□□□□□ -0.33
ERCC3-209ENST00000494464 FCRL3Q96P31 734 aaPredicted RBP12.97□□□□□ -0.33
ERCC3-209ENST00000494464 SH3GL2Q99962 352 aa12.97□□□□□ -0.33
ERCC3-209ENST00000494464 APOL2Q9BQE5 337 aa12.97□□□□□ -0.33
ERCC3-209ENST00000494464 TXLNGYQ9BZA5 131 aa12.97□□□□□ -0.33
ERCC3-209ENST00000494464 WASH6PQ9NQA3 447 aa12.97□□□□□ -0.33
ERCC3-209ENST00000494464 PRDM8Q9NQV8 689 aa12.97□□□□□ -0.33
ERCC3-209ENST00000494464 PDP2Q9P2J9 529 aa12.97□□□□□ -0.33
ERCC3-209ENST00000494464 MTRF1LQ9UGC7 380 aaKnown RBP12.97□□□□□ -0.33
ERCC3-209ENST00000494464 DRG1Q9Y295 367 aaKnown RBP12.97□□□□□ -0.33
ERCC3-209ENST00000494464 SNX24Q9Y343 169 aa12.97□□□□□ -0.33
ERCC3-209ENST00000494464 TRBV23OR9-2A0A075B6M9 112 aa12.96□□□□□ -0.33
ERCC3-209ENST00000494464 AGAP14A8MT82 685 aa12.96□□□□□ -0.33
ERCC3-209ENST00000494464 AGPSO00116 658 aa12.96□□□□□ -0.33
ERCC3-209ENST00000494464 NDC80O14777 642 aa12.96□□□□□ -0.33
ERCC3-209ENST00000494464 KLK10O43240 276 aa12.96□□□□□ -0.33
ERCC3-209ENST00000494464 UGT1A9O60656 530 aa12.96□□□□□ -0.33
ERCC3-209ENST00000494464 HOXB3P14651 431 aaPredicted RBP12.96□□□□□ -0.33
ERCC3-209ENST00000494464 UGT1A6P19224 532 aa12.96□□□□□ -0.33
ERCC3-209ENST00000494464 UGT1A1P22309 533 aa12.96□□□□□ -0.33
ERCC3-209ENST00000494464 UGT1A4P22310 534 aa12.96□□□□□ -0.33
ERCC3-209ENST00000494464 SLC5A2P31639 672 aa12.96□□□□□ -0.33
ERCC3-209ENST00000494464 UGT1A3P35503 534 aa12.96□□□□□ -0.33
ERCC3-209ENST00000494464 ETV5P41161 510 aa12.96□□□□□ -0.33
ERCC3-209ENST00000494464 ZNF140P52738 457 aaPredicted RBP12.96□□□□□ -0.33
ERCC3-209ENST00000494464 GDF10P55107 478 aa12.96□□□□□ -0.33
ERCC3-209ENST00000494464 CBX1P83916 185 aa12.96□□□□□ -0.33
ERCC3-209ENST00000494464 CAV1Q03135 178 aa12.96□□□□□ -0.33
ERCC3-209ENST00000494464 NFATC2Q13469 925 aa12.96□□□□□ -0.33
ERCC3-209ENST00000494464 OASLQ15646 514 aaKnown RBP12.96□□□□□ -0.33
ERCC3-209ENST00000494464 ABRAXAS1Q6UWZ7 409 aa12.96□□□□□ -0.33
ERCC3-209ENST00000494464 LRIG3Q6UXM1 1119 aa12.96□□□□□ -0.33
ERCC3-209ENST00000494464 IQCKQ8N0W5 287 aa12.96□□□□□ -0.33
ERCC3-209ENST00000494464 CCDC89Q8N998 374 aa12.96□□□□□ -0.33
ERCC3-209ENST00000494464 BBOF1Q8ND07 529 aa12.96□□□□□ -0.33
ERCC3-209ENST00000494464 OR4K2Q8NGD2 314 aa12.96□□□□□ -0.33
ERCC3-209ENST00000494464 ART4Q93070 314 aa12.96□□□□□ -0.33
ERCC3-209ENST00000494464 SNF8Q96H20 258 aa12.96□□□□□ -0.33
ERCC3-209ENST00000494464 AHCYL2Q96HN2 611 aaKnown RBP12.96□□□□□ -0.33
ERCC3-209ENST00000494464 ZNF514Q96K75 400 aaPredicted RBP12.96□□□□□ -0.33
ERCC3-209ENST00000494464 TRIM31Q9BZY9 425 aa12.96□□□□□ -0.33
ERCC3-209ENST00000494464 ZMYND15Q9H091 742 aa12.96□□□□□ -0.33
ERCC3-209ENST00000494464 LRRC40Q9H9A6 602 aa12.96□□□□□ -0.33
ERCC3-209ENST00000494464 UGT1A7Q9HAW7 530 aa12.96□□□□□ -0.33
ERCC3-209ENST00000494464 UGT1A10Q9HAW8 530 aa12.96□□□□□ -0.33
ERCC3-209ENST00000494464 UGT1A8Q9HAW9 530 aa12.96□□□□□ -0.33
ERCC3-209ENST00000494464 POT1Q9NUX5 634 aa12.96□□□□□ -0.33
ERCC3-209ENST00000494464 DNAJC16Q9Y2G8 782 aa12.96□□□□□ -0.33
ERCC3-209ENST00000494464 DNMT3AQ9Y6K1 912 aaPredicted RBP12.96□□□□□ -0.33
ERCC3-209ENST00000494464 MN1Q10571 1320 aaPredicted RBP12.96□□□□□ -0.34
ERCC3-209ENST00000494464 TEX51A0A1B0GUA7 166 aa12.95□□□□□ -0.34
ERCC3-209ENST00000494464 PDZK1P1A8MUH7 402 aa12.95□□□□□ -0.34
ERCC3-209ENST00000494464 SRP72O76094 671 aaKnown RBP12.95□□□□□ -0.34
ERCC3-209ENST00000494464 METTL18O95568 372 aa12.95□□□□□ -0.34
ERCC3-209ENST00000494464 AP2A1O95782 977 aa12.95□□□□□ -0.34
ERCC3-209ENST00000494464 SYF2O95926 243 aaKnown RBP12.95□□□□□ -0.34
ERCC3-209ENST00000494464 IDSP22304 550 aa12.95□□□□□ -0.34
ERCC3-209ENST00000494464 CD82P27701 267 aa12.95□□□□□ -0.34
ERCC3-209ENST00000494464 CA5AP35218 305 aa12.95□□□□□ -0.34
ERCC3-209ENST00000494464 HADHAP40939 763 aa12.95□□□□□ -0.34
ERCC3-209ENST00000494464 CTSCP53634 463 aa12.95□□□□□ -0.34
ERCC3-209ENST00000494464 XIAPP98170 497 aa12.95□□□□□ -0.34
ERCC3-209ENST00000494464 CALCOCO2Q13137 446 aa12.95□□□□□ -0.34
ERCC3-209ENST00000494464 CLN3Q13286 438 aa12.95□□□□□ -0.34
ERCC3-209ENST00000494464 SNX1Q13596 522 aa12.95□□□□□ -0.34
ERCC3-209ENST00000494464 PTPRCAPQ14761 206 aa12.95□□□□□ -0.34
ERCC3-209ENST00000494464 RBM12BQ8IXT5 1001 aaKnown RBP12.95□□□□□ -0.34
ERCC3-209ENST00000494464 RASGEF1AQ8N9B8 481 aa12.95□□□□□ -0.34
ERCC3-209ENST00000494464 AGBL5Q8NDL9 886 aa12.95□□□□□ -0.34
ERCC3-209ENST00000494464 RCBTB1Q8NDN9 531 aa12.95□□□□□ -0.34
ERCC3-209ENST00000494464 ZNF398Q8TD17 642 aa12.95□□□□□ -0.34
ERCC3-209ENST00000494464 SNRNP27Q8WVK2 155 aaKnown RBP12.95□□□□□ -0.34
ERCC3-209ENST00000494464 RUFY1Q96T51 708 aa12.95□□□□□ -0.34
ERCC3-209ENST00000494464 TMEM121Q9BTD3 319 aa12.95□□□□□ -0.34
ERCC3-209ENST00000494464 TMEM9Q9P0T7 183 aa12.95□□□□□ -0.34
ERCC3-209ENST00000494464 SCHIP1Q9P0W5 487 aaPredicted RBP12.95□□□□□ -0.34
ERCC3-209ENST00000494464 ZNF624Q9P2J8 865 aaPredicted RBP12.95□□□□□ -0.34
ERCC3-209ENST00000494464 ASIC3Q9UHC3 531 aa12.95□□□□□ -0.34
ERCC3-209ENST00000494464 FKBPLQ9UIM3 349 aa12.95□□□□□ -0.34
ERCC3-209ENST00000494464 PRAMEF33A0A0G2JMD5 474 aa12.94□□□□□ -0.34
ERCC3-209ENST00000494464 KLHL33A6NCF5 533 aa12.94□□□□□ -0.34
ERCC3-209ENST00000494464 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.94□□□□□ -0.34
ERCC3-209ENST00000494464 PSMD3O43242 534 aa12.94□□□□□ -0.34
ERCC3-209ENST00000494464 LDB2O43679 373 aa12.94□□□□□ -0.34
ERCC3-209ENST00000494464 PRAMEF10O60809 474 aa12.94□□□□□ -0.34
ERCC3-209ENST00000494464 LIPCP11150 499 aa12.94□□□□□ -0.34
ERCC3-209ENST00000494464 BRAFP15056 766 aa12.94□□□□□ -0.34
ERCC3-209ENST00000494464 MSH3P20585 1137 aa12.94□□□□□ -0.34
ERCC3-209ENST00000494464 IVDP26440 423 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms