RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 NR1D2Q14995 579 aa13.28□□□□□ -0.28
COL1A1-208ENST00000494334 LONRF1Q17RB8 773 aa13.28□□□□□ -0.28
COL1A1-208ENST00000494334 TYSND1Q2T9J0 566 aa13.28□□□□□ -0.28
COL1A1-208ENST00000494334 HES3Q5TGS1 186 aa13.28□□□□□ -0.28
COL1A1-208ENST00000494334 CDCP2Q5VXM1 449 aa13.28□□□□□ -0.28
COL1A1-208ENST00000494334 TMPRSS12Q86WS5 348 aa13.28□□□□□ -0.28
COL1A1-208ENST00000494334 CILP2Q8IUL8 1156 aa13.28□□□□□ -0.28
COL1A1-208ENST00000494334 CCNJLQ8IV13 435 aa13.28□□□□□ -0.28
COL1A1-208ENST00000494334 UNC5BQ8IZJ1 945 aa13.28□□□□□ -0.28
COL1A1-208ENST00000494334 OTUD6BQ8N6M0 293 aa13.28□□□□□ -0.28
COL1A1-208ENST00000494334 CEP112Q8N8E3 955 aa13.28□□□□□ -0.28
COL1A1-208ENST00000494334 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.28□□□□□ -0.28
COL1A1-208ENST00000494334 NOA1Q8NC60 698 aaKnown RBP13.28□□□□□ -0.28
COL1A1-208ENST00000494334 HM13Q8TCT9 377 aa13.28□□□□□ -0.28
COL1A1-208ENST00000494334 ART4Q93070 314 aa13.28□□□□□ -0.28
COL1A1-208ENST00000494334 LRRC39Q96DD0 335 aa13.28□□□□□ -0.28
COL1A1-208ENST00000494334 NAT9Q9BTE0 207 aa13.28□□□□□ -0.28
COL1A1-208ENST00000494334 P2RY12Q9H244 342 aa13.28□□□□□ -0.28
COL1A1-208ENST00000494334 VPS37BQ9H9H4 285 aa13.28□□□□□ -0.28
COL1A1-208ENST00000494334 PLAC1Q9HBJ0 212 aa13.28□□□□□ -0.28
COL1A1-208ENST00000494334 C20orf96Q9NUD7 363 aaPredicted RBP13.28□□□□□ -0.28
COL1A1-208ENST00000494334 CPNE7Q9UBL6 633 aa13.28□□□□□ -0.28
COL1A1-208ENST00000494334 KLK13Q9UKR3 277 aa13.28□□□□□ -0.28
COL1A1-208ENST00000494334 ACSL5Q9ULC5 683 aa13.28□□□□□ -0.28
COL1A1-208ENST00000494334 PSMD13Q9UNM6 376 aa13.28□□□□□ -0.28
COL1A1-208ENST00000494334 CHMP2BQ9UQN3 213 aa13.28□□□□□ -0.28
COL1A1-208ENST00000494334 ASXL3Q9C0F0 2248 aa13.28□□□□□ -0.28
COL1A1-208ENST00000494334 PRAMEF33A0A0G2JMD5 474 aa13.27□□□□□ -0.29
COL1A1-208ENST00000494334 FAM149AA5PLN7 773 aa13.27□□□□□ -0.29
COL1A1-208ENST00000494334 FAM221BA6H8Z2 402 aa13.27□□□□□ -0.29
COL1A1-208ENST00000494334 IQCF5A8MTL0 148 aa13.27□□□□□ -0.29
COL1A1-208ENST00000494334 MT-CO3P00414 261 aa13.27□□□□□ -0.29
COL1A1-208ENST00000494334 FTH1P02794 183 aa13.27□□□□□ -0.29
COL1A1-208ENST00000494334 RPLP0P05388 317 aaKnown RBP13.27□□□□□ -0.29
COL1A1-208ENST00000494334 GSTM1P09488 218 aa13.27□□□□□ -0.29
COL1A1-208ENST00000494334 JUPP14923 745 aa13.27□□□□□ -0.29
COL1A1-208ENST00000494334 RPS3P23396 243 aaKnown RBP eCLIP13.27□□□□□ -0.29
COL1A1-208ENST00000494334 ALDH4A1P30038 563 aa13.27□□□□□ -0.29
COL1A1-208ENST00000494334 GPR3P46089 330 aa13.27□□□□□ -0.29
COL1A1-208ENST00000494334 PLTPP55058 493 aa13.27□□□□□ -0.29
COL1A1-208ENST00000494334 OR1D5P58170 312 aa13.27□□□□□ -0.29
COL1A1-208ENST00000494334 GSTM4Q03013 218 aa13.27□□□□□ -0.29
COL1A1-208ENST00000494334 PDIA2Q13087 525 aaKnown RBP13.27□□□□□ -0.29
COL1A1-208ENST00000494334 SPANXN3Q5MJ09 141 aa13.27□□□□□ -0.29
COL1A1-208ENST00000494334 ZDHHC24Q6UX98 284 aa13.27□□□□□ -0.29
COL1A1-208ENST00000494334 UNC5AQ6ZN44 842 aa13.27□□□□□ -0.29
COL1A1-208ENST00000494334 CENPUQ71F23 418 aa13.27□□□□□ -0.29
COL1A1-208ENST00000494334 SPRED1Q7Z699 444 aa13.27□□□□□ -0.29
COL1A1-208ENST00000494334 KCNMB4Q86W47 210 aa13.27□□□□□ -0.29
COL1A1-208ENST00000494334 ZNF761Q86XN6 746 aaPredicted RBP13.27□□□□□ -0.29
COL1A1-208ENST00000494334 MARCH9Q86YJ5 346 aa13.27□□□□□ -0.29
COL1A1-208ENST00000494334 ANKMY2Q8IV38 441 aa13.27□□□□□ -0.29
COL1A1-208ENST00000494334 DENND6AQ8IWF6 608 aa13.27□□□□□ -0.29
COL1A1-208ENST00000494334 GALNT15Q8N3T1 639 aa13.27□□□□□ -0.29
COL1A1-208ENST00000494334 SPDYE1Q8NFV5 336 aaPredicted RBP13.27□□□□□ -0.29
COL1A1-208ENST00000494334 WDR48Q8TAF3 677 aa13.27□□□□□ -0.29
COL1A1-208ENST00000494334 SEC14L1Q92503 715 aa13.27□□□□□ -0.29
COL1A1-208ENST00000494334 INSM2Q96T92 566 aaPredicted RBP13.27□□□□□ -0.29
COL1A1-208ENST00000494334 TCF12Q99081 682 aa13.27□□□□□ -0.29
COL1A1-208ENST00000494334 WWP1Q9H0M0 922 aa13.27□□□□□ -0.29
COL1A1-208ENST00000494334 LRRN3Q9H3W5 708 aa13.27□□□□□ -0.29
COL1A1-208ENST00000494334 COG4Q9H9E3 785 aa13.27□□□□□ -0.29
COL1A1-208ENST00000494334 ZC3H7BQ9UGR2 993 aaKnown RBP13.27□□□□□ -0.29
COL1A1-208ENST00000494334 CACNA1AO00555 2505 aa13.27□□□□□ -0.29
COL1A1-208ENST00000494334 UBA6A0AVT1 1052 aaPredicted RBP13.26□□□□□ -0.29
COL1A1-208ENST00000494334 ESYT3A0FGR9 886 aa13.26□□□□□ -0.29
COL1A1-208ENST00000494334 BHMG1C9JSJ3 638 aaPredicted RBP13.26□□□□□ -0.29
COL1A1-208ENST00000494334 PFDN6O15212 129 aa13.26□□□□□ -0.29
COL1A1-208ENST00000494334 S1PR4O95977 384 aa13.26□□□□□ -0.29
COL1A1-208ENST00000494334 VIPP01282 170 aa13.26□□□□□ -0.29
COL1A1-208ENST00000494334 F7P08709 466 aaPredicted RBP13.26□□□□□ -0.29
COL1A1-208ENST00000494334 ITGB6P18564 788 aa13.26□□□□□ -0.29
COL1A1-208ENST00000494334 PDHA2P29803 388 aa13.26□□□□□ -0.29
COL1A1-208ENST00000494334 HALP42357 657 aa13.26□□□□□ -0.29
COL1A1-208ENST00000494334 SHC2P98077 582 aa13.26□□□□□ -0.29
COL1A1-208ENST00000494334 FOXK2Q01167 660 aa13.26□□□□□ -0.29
COL1A1-208ENST00000494334 CAV1Q03135 178 aa13.26□□□□□ -0.29
COL1A1-208ENST00000494334 TARDBPQ13148 414 aaKnown RBP eCLIP13.26□□□□□ -0.29
COL1A1-208ENST00000494334 CTBP1Q13363 440 aa13.26□□□□□ -0.29
COL1A1-208ENST00000494334 FASTKD3Q14CZ7 662 aaKnown RBP13.26□□□□□ -0.29
COL1A1-208ENST00000494334 RPE65Q16518 533 aa13.26□□□□□ -0.29
COL1A1-208ENST00000494334 HSP90AA5PQ58FG0 334 aa13.26□□□□□ -0.29
COL1A1-208ENST00000494334 ZNF789Q5FWF6 425 aa13.26□□□□□ -0.29
COL1A1-208ENST00000494334 CTSL3PQ5NE16 218 aa13.26□□□□□ -0.29
COL1A1-208ENST00000494334 STEAP4Q687X5 459 aa13.26□□□□□ -0.29
COL1A1-208ENST00000494334 ZNF470Q6ECI4 717 aa13.26□□□□□ -0.29
COL1A1-208ENST00000494334 CAPRIN2Q6IMN6 1127 aaKnown RBP13.26□□□□□ -0.29
COL1A1-208ENST00000494334 NAPRTQ6XQN6 538 aa13.26□□□□□ -0.29
COL1A1-208ENST00000494334 LRRC6Q86X45 466 aa13.26□□□□□ -0.29
COL1A1-208ENST00000494334 LMNTD2Q8IXW0 634 aa13.26□□□□□ -0.29
COL1A1-208ENST00000494334 CACTIN-AS1Q8N1I8 211 aa13.26□□□□□ -0.29
COL1A1-208ENST00000494334 AVL9Q8NBF6 648 aa13.26□□□□□ -0.29
COL1A1-208ENST00000494334 FBXO36Q8NEA4 188 aa13.26□□□□□ -0.29
COL1A1-208ENST00000494334 FBXO25Q8TCJ0 367 aa13.26□□□□□ -0.29
COL1A1-208ENST00000494334 LKAAEAR1Q8TD35 194 aa13.26□□□□□ -0.29
COL1A1-208ENST00000494334 CALML6Q8TD86 181 aa13.26□□□□□ -0.29
COL1A1-208ENST00000494334 ELMO1Q92556 727 aa13.26□□□□□ -0.29
COL1A1-208ENST00000494334 LPGAT1Q92604 370 aa13.26□□□□□ -0.29
COL1A1-208ENST00000494334 SH3KBP1Q96B97 665 aa13.26□□□□□ -0.29
COL1A1-208ENST00000494334 CFAP36Q96G28 342 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms