RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 C17orf113A0A1B0GUU1 675 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 IQCF5A8MTL0 148 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 NIPSNAP2O75323 286 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 ERLIN1O75477 346 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 GABRB3P28472 473 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 GP5P40197 560 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 ILF2Q12905 390 aaKnown RBP14.3□□□□□ -0.12
BRCA1-223ENST00000494123 NFE2L1Q14494 772 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 SLC29A2Q14542 456 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 TMED2Q15363 201 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 UAP1Q16222 522 aaPredicted RBP14.3□□□□□ -0.12
BRCA1-223ENST00000494123 STPG1Q5TH74 334 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 LVRNQ6Q4G3 990 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 CFAP206Q8IYR0 622 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 GPATCH11Q8N954 259 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 SETD7Q8WTS6 366 aaKnown RBP14.3□□□□□ -0.12
BRCA1-223ENST00000494123 CAVIN3Q969G5 261 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 NDNQ99608 321 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 DUSP23Q9BVJ7 150 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 DPEP2Q9H4A9 486 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 SARS2Q9NP81 518 aaKnown RBP14.3□□□□□ -0.12
BRCA1-223ENST00000494123 NLGN3Q9NZ94 848 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 CORO1CQ9ULV4 474 aaPredicted RBP14.3□□□□□ -0.12
BRCA1-223ENST00000494123 ST14Q9Y5Y6 855 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 IKBKGQ9Y6K9 419 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 CABIN1Q9Y6J0 2220 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 EXOC1LA0A1B0GW35 172 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 PDZK1P1A8MUH7 402 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 TPP1O14773 563 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 KPNA5O15131 536 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 FLRT2O43155 660 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 VPS26AO75436 327 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 C1QAP02745 245 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 GRK6P43250 576 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 CLCNKAP51800 687 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 CSE1LP55060 971 aaKnown RBP14.3□□□□□ -0.12
BRCA1-223ENST00000494123 DMPKQ09013 629 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 BRD3Q15059 726 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 SEPT7Q16181 437 aaKnown RBP14.3□□□□□ -0.12
BRCA1-223ENST00000494123 OTOAQ7RTW8 1153 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 KANSL1Q7Z3B3 1105 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 ZC3HC1Q86WB0 502 aaKnown RBP14.3□□□□□ -0.12
BRCA1-223ENST00000494123 EID2Q8N6I1 236 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 MYRIPQ8NFW9 859 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 LKAAEAR1Q8TD35 194 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 FAM136AQ96C01 138 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 RBBP8Q99708 897 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 CCDC77Q9BR77 488 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 AARSD1Q9BTE6 412 aaKnown RBP14.3□□□□□ -0.12
BRCA1-223ENST00000494123 RHOJQ9H4E5 214 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 COG4Q9H9E3 785 aa14.3□□□□□ -0.12
BRCA1-223ENST00000494123 SPATS2LQ9NUQ6 558 aaKnown RBP14.3□□□□□ -0.12
BRCA1-223ENST00000494123 FAM186AA6NE01 2351 aa14.29□□□□□ -0.12
BRCA1-223ENST00000494123 B4DGG1 531 aa14.29□□□□□ -0.12
BRCA1-223ENST00000494123 POC1B-GALNT4F8VUJ3 575 aa14.29□□□□□ -0.12
BRCA1-223ENST00000494123 LIN7AO14910 233 aaPredicted RBP14.29□□□□□ -0.12
BRCA1-223ENST00000494123 APOA4P06727 396 aa14.29□□□□□ -0.12
BRCA1-223ENST00000494123 INHBAP08476 426 aa14.29□□□□□ -0.12
BRCA1-223ENST00000494123 SLC2A4P14672 509 aa14.29□□□□□ -0.12
BRCA1-223ENST00000494123 RPL10P27635 214 aaKnown RBP14.29□□□□□ -0.12
BRCA1-223ENST00000494123 SPRP35270 261 aaPredicted RBP14.29□□□□□ -0.12
BRCA1-223ENST00000494123 GRTP1Q5TC63 336 aa14.29□□□□□ -0.12
BRCA1-223ENST00000494123 FAM45BPQ6NSW5 357 aa14.29□□□□□ -0.12
BRCA1-223ENST00000494123 ZNF549Q6P9A3 640 aa14.29□□□□□ -0.12
BRCA1-223ENST00000494123 NAPRTQ6XQN6 538 aa14.29□□□□□ -0.12
BRCA1-223ENST00000494123 FAM83HQ6ZRV2 1179 aaPredicted RBP14.29□□□□□ -0.12
BRCA1-223ENST00000494123 OR4C6Q8NH72 309 aa14.29□□□□□ -0.12
BRCA1-223ENST00000494123 FAM45AQ8TCE6 357 aa14.29□□□□□ -0.12
BRCA1-223ENST00000494123 ZDHHC1Q8WTX9 485 aa14.29□□□□□ -0.12
BRCA1-223ENST00000494123 ASZ1Q8WWH4 475 aa14.29□□□□□ -0.12
BRCA1-223ENST00000494123 KCNJ9Q92806 393 aa14.29□□□□□ -0.12
BRCA1-223ENST00000494123 GLMNQ92990 594 aa14.29□□□□□ -0.12
BRCA1-223ENST00000494123 TMEM159Q96B96 161 aa14.29□□□□□ -0.12
BRCA1-223ENST00000494123 VPS39Q96JC1 886 aa14.29□□□□□ -0.12
BRCA1-223ENST00000494123 ELMO2Q96JJ3 720 aa14.29□□□□□ -0.12
BRCA1-223ENST00000494123 SIRPGQ9P1W8 387 aa14.29□□□□□ -0.12
BRCA1-223ENST00000494123 TBC1D29Q9UFV1 150 aa14.29□□□□□ -0.12
BRCA1-223ENST00000494123 ACSL5Q9ULC5 683 aa14.29□□□□□ -0.12
BRCA1-223ENST00000494123 ZNF292O60281 2723 aa14.28□□□□□ -0.12
BRCA1-223ENST00000494123 FAM95CA0A1B0GW59 222 aa14.28□□□□□ -0.12
BRCA1-223ENST00000494123 CTIFO43310 598 aaKnown RBP14.28□□□□□ -0.12
BRCA1-223ENST00000494123 SLC35G4P0C7Q5 338 aa14.28□□□□□ -0.12
BRCA1-223ENST00000494123 SAT1P21673 171 aa14.28□□□□□ -0.12
BRCA1-223ENST00000494123 CCR7P32248 378 aa14.28□□□□□ -0.12
BRCA1-223ENST00000494123 HSD17B3P37058 310 aa14.28□□□□□ -0.12
BRCA1-223ENST00000494123 HALP42357 657 aa14.28□□□□□ -0.12
BRCA1-223ENST00000494123 MSH2P43246 934 aa14.28□□□□□ -0.12
BRCA1-223ENST00000494123 SLC12A2P55011 1212 aa14.28□□□□□ -0.12
BRCA1-223ENST00000494123 PLOD1Q02809 727 aaPredicted RBP14.28□□□□□ -0.12
BRCA1-223ENST00000494123 HSPA14Q0VDF9 509 aa14.28□□□□□ -0.12
BRCA1-223ENST00000494123 C6orf132Q5T0Z8 1188 aa14.28□□□□□ -0.12
BRCA1-223ENST00000494123 RBM20Q5T481 1227 aaKnown RBP14.28□□□□□ -0.12
BRCA1-223ENST00000494123 METRNLQ641Q3 311 aa14.28□□□□□ -0.12
BRCA1-223ENST00000494123 UGT3A1Q6NUS8 523 aa14.28□□□□□ -0.12
BRCA1-223ENST00000494123 ZCCHC8Q6NZY4 707 aaKnown RBP14.28□□□□□ -0.12
BRCA1-223ENST00000494123 NAXDQ8IW45 347 aa14.28□□□□□ -0.12
BRCA1-223ENST00000494123 LILRA3Q8N6C8 439 aaPredicted RBP14.28□□□□□ -0.12
BRCA1-223ENST00000494123 RHBDD1Q8TEB9 315 aa14.28□□□□□ -0.12
BRCA1-223ENST00000494123 PAFAH2Q99487 392 aa14.28□□□□□ -0.12
BRCA1-223ENST00000494123 PRDM8Q9NQV8 689 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms