RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 TTC19Q6DKK2 380 aaPredicted RBP12.45□□□□□ -0.42
VPS52-220ENST00000493674 NEK10Q6ZWH5 1172 aa12.45□□□□□ -0.42
VPS52-220ENST00000493674 DET1Q7L5Y6 550 aa12.45□□□□□ -0.42
VPS52-220ENST00000493674 C11orf96Q7Z7L8 435 aa12.45□□□□□ -0.42
VPS52-220ENST00000493674 PGBD3Q8N328 593 aa12.45□□□□□ -0.42
VPS52-220ENST00000493674 SPATA6LQ8N4H0 392 aa12.45□□□□□ -0.42
VPS52-220ENST00000493674 OXR1Q8N573 874 aa12.45□□□□□ -0.42
VPS52-220ENST00000493674 RAB3IL1Q8TBN0 382 aa12.45□□□□□ -0.42
VPS52-220ENST00000493674 EEF1AKMT1Q8WVE0 214 aa12.45□□□□□ -0.42
VPS52-220ENST00000493674 KIAA1191Q96A73 305 aa12.45□□□□□ -0.42
VPS52-220ENST00000493674 LINGO1Q96FE5 620 aa12.45□□□□□ -0.42
VPS52-220ENST00000493674 SCARF2Q96GP6 870 aaPredicted RBP12.45□□□□□ -0.42
VPS52-220ENST00000493674 ORAI3Q9BRQ5 295 aa12.45□□□□□ -0.42
VPS52-220ENST00000493674 TSSK1BQ9BXA7 367 aa12.45□□□□□ -0.42
VPS52-220ENST00000493674 OR2AG1Q9H205 316 aa12.45□□□□□ -0.42
VPS52-220ENST00000493674 C6orf106Q9H6K1 298 aaPredicted RBP12.45□□□□□ -0.42
VPS52-220ENST00000493674 EBF2Q9HAK2 575 aa12.45□□□□□ -0.42
VPS52-220ENST00000493674 PHPT1Q9NRX4 125 aaPredicted RBP12.45□□□□□ -0.42
VPS52-220ENST00000493674 DMTF1Q9Y222 760 aa12.45□□□□□ -0.42
VPS52-220ENST00000493674 HCN4Q9Y3Q4 1203 aa12.45□□□□□ -0.42
VPS52-220ENST00000493674 HEATR5BQ9P2D3 2071 aa12.44□□□□□ -0.42
VPS52-220ENST00000493674 SLC5A10A0PJK1 596 aa12.44□□□□□ -0.42
VPS52-220ENST00000493674 PRR19A6NJB7 356 aa12.44□□□□□ -0.42
VPS52-220ENST00000493674 OR2AG2A6NM03 316 aa12.44□□□□□ -0.42
VPS52-220ENST00000493674 KERAO60938 352 aa12.44□□□□□ -0.42
VPS52-220ENST00000493674 CDK14O94921 469 aa12.44□□□□□ -0.42
VPS52-220ENST00000493674 SLCO2B1O94956 709 aa12.44□□□□□ -0.42
VPS52-220ENST00000493674 ENO3P13929 434 aaPredicted RBP12.44□□□□□ -0.42
VPS52-220ENST00000493674 CPA3P15088 417 aa12.44□□□□□ -0.42
VPS52-220ENST00000493674 ZNF8P17098 575 aaPredicted RBP12.44□□□□□ -0.42
VPS52-220ENST00000493674 ITGB6P18564 788 aa12.44□□□□□ -0.42
VPS52-220ENST00000493674 DGKAP23743 735 aa12.44□□□□□ -0.42
VPS52-220ENST00000493674 ALDH3A1P30838 453 aa12.44□□□□□ -0.42
VPS52-220ENST00000493674 CXCL12P48061 93 aa12.44□□□□□ -0.42
VPS52-220ENST00000493674 KCNC1P48547 511 aa12.44□□□□□ -0.42
VPS52-220ENST00000493674 CCR3P51677 355 aa12.44□□□□□ -0.42
VPS52-220ENST00000493674 PFN3P60673 137 aa12.44□□□□□ -0.42
VPS52-220ENST00000493674 NFKB2Q00653 900 aa12.44□□□□□ -0.42
VPS52-220ENST00000493674 CES4AQ5XG92 561 aa12.44□□□□□ -0.42
VPS52-220ENST00000493674 KLC3Q6P597 504 aa12.44□□□□□ -0.42
VPS52-220ENST00000493674 TMEM220Q6QAJ8 160 aa12.44□□□□□ -0.42
VPS52-220ENST00000493674 SBSNQ6UWP8 590 aa12.44□□□□□ -0.42
VPS52-220ENST00000493674 CYHR1Q6ZMK1 362 aa12.44□□□□□ -0.42
VPS52-220ENST00000493674 GCNT7Q6ZNI0 430 aa12.44□□□□□ -0.42
VPS52-220ENST00000493674 OTOAQ7RTW8 1153 aa12.44□□□□□ -0.42
VPS52-220ENST00000493674 BEND7Q8N7W2 519 aaPredicted RBP12.44□□□□□ -0.42
VPS52-220ENST00000493674 DYDC1Q8WWB3 177 aa12.44□□□□□ -0.42
VPS52-220ENST00000493674 FOXJ1Q92949 421 aa12.44□□□□□ -0.42
VPS52-220ENST00000493674 GLMNQ92990 594 aa12.44□□□□□ -0.42
VPS52-220ENST00000493674 BMFQ96LC9 184 aa12.44□□□□□ -0.42
VPS52-220ENST00000493674 CCM2Q9BSQ5 444 aa12.44□□□□□ -0.42
VPS52-220ENST00000493674 APOOQ9BUR5 198 aa12.44□□□□□ -0.42
VPS52-220ENST00000493674 MECRQ9BV79 373 aa12.44□□□□□ -0.42
VPS52-220ENST00000493674 TPSD1Q9BZJ3 242 aa12.44□□□□□ -0.42
VPS52-220ENST00000493674 UNKQ9C0B0 810 aaKnown RBP12.44□□□□□ -0.42
VPS52-220ENST00000493674 SARS2Q9NP81 518 aaKnown RBP12.44□□□□□ -0.42
VPS52-220ENST00000493674 FZD3Q9NPG1 666 aa12.44□□□□□ -0.42
VPS52-220ENST00000493674 PRMT8Q9NR22 394 aaPredicted RBP12.44□□□□□ -0.42
VPS52-220ENST00000493674 GPR27Q9NS67 375 aa12.44□□□□□ -0.42
VPS52-220ENST00000493674 OXSMQ9NWU1 459 aa12.44□□□□□ -0.42
VPS52-220ENST00000493674 SLC17A4Q9Y2C5 497 aa12.44□□□□□ -0.42
VPS52-220ENST00000493674 PCYT1BQ9Y5K3 369 aaPredicted RBP12.44□□□□□ -0.42
VPS52-220ENST00000493674 HS3ST3A1Q9Y663 406 aa12.44□□□□□ -0.42
VPS52-220ENST00000493674 CCDC163A0A0D9SF12 145 aa12.43□□□□□ -0.42
VPS52-220ENST00000493674 C17orf113A0A1B0GUU1 675 aa12.43□□□□□ -0.42
VPS52-220ENST00000493674 NPEPPSL1A6NEC2 478 aa12.43□□□□□ -0.42
VPS52-220ENST00000493674 POM121BA6NF01 834 aa12.43□□□□□ -0.42
VPS52-220ENST00000493674 TMEM202A6NGA9 273 aa12.43□□□□□ -0.42
VPS52-220ENST00000493674 CDC7O00311 574 aa12.43□□□□□ -0.42
VPS52-220ENST00000493674 TOR1BO14657 336 aa12.43□□□□□ -0.42
VPS52-220ENST00000493674 SLC31A1O15431 190 aa12.43□□□□□ -0.42
VPS52-220ENST00000493674 PI15O43692 258 aa12.43□□□□□ -0.42
VPS52-220ENST00000493674 KLK8O60259 260 aa12.43□□□□□ -0.42
VPS52-220ENST00000493674 DLX3O60479 287 aa12.43□□□□□ -0.42
VPS52-220ENST00000493674 MPC1LP0DKB6 136 aa12.43□□□□□ -0.42
VPS52-220ENST00000493674 MYL2P10916 166 aa12.43□□□□□ -0.42
VPS52-220ENST00000493674 MTHFD2P13995 350 aa12.43□□□□□ -0.42
VPS52-220ENST00000493674 BGNP21810 368 aa12.43□□□□□ -0.42
VPS52-220ENST00000493674 RGS4P49798 205 aa12.43□□□□□ -0.42
VPS52-220ENST00000493674 IRX4P78413 519 aa12.43□□□□□ -0.42
VPS52-220ENST00000493674 GTF2H3Q13889 308 aa12.43□□□□□ -0.42
VPS52-220ENST00000493674 PPP1R3AQ16821 1122 aa12.43□□□□□ -0.42
VPS52-220ENST00000493674 PIWIL4Q7Z3Z4 852 aaKnown RBP12.43□□□□□ -0.42
VPS52-220ENST00000493674 ABI3BPQ7Z7G0 1075 aa12.43□□□□□ -0.42
VPS52-220ENST00000493674 NUDCD3Q8IVD9 361 aa12.43□□□□□ -0.42
VPS52-220ENST00000493674 C10orf107Q8IVU9 208 aa12.43□□□□□ -0.42
VPS52-220ENST00000493674 FAM160A2Q8N612 972 aaPredicted RBP12.43□□□□□ -0.42
VPS52-220ENST00000493674 FRMD1Q8N878 549 aa12.43□□□□□ -0.42
VPS52-220ENST00000493674 ZNF75CPQ92670 426 aaPredicted RBP12.43□□□□□ -0.42
VPS52-220ENST00000493674 SCYL1Q96KG9 808 aa12.43□□□□□ -0.42
VPS52-220ENST00000493674 PAIP2Q9BPZ3 127 aaKnown RBP12.43□□□□□ -0.42
VPS52-220ENST00000493674 GPR174Q9BXC1 333 aa12.43□□□□□ -0.42
VPS52-220ENST00000493674 ALG9Q9H6U8 611 aa12.43□□□□□ -0.42
VPS52-220ENST00000493674 RMI1Q9H9A7 625 aa12.43□□□□□ -0.42
VPS52-220ENST00000493674 CPSF2Q9P2I0 782 aaKnown RBP12.43□□□□□ -0.42
VPS52-220ENST00000493674 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.43□□□□□ -0.42
VPS52-220ENST00000493674 OR1A2Q9Y585 309 aa12.43□□□□□ -0.42
VPS52-220ENST00000493674 DNMT3AQ9Y6K1 912 aaPredicted RBP12.43□□□□□ -0.42
VPS52-220ENST00000493674 KNL1Q8NG31 2342 aa12.43□□□□□ -0.42
VPS52-220ENST00000493674 KLHL33A6NCF5 533 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms