RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	DENND5B	Q6ZUT9	1274 aa		2.88	□□□□□ -1.95
CCNL1-223	ENST00000481173	ZNF534	Q76KX8	674 aa		2.88	□□□□□ -1.95
CCNL1-223	ENST00000481173	HIST3H2A	Q7L7L0	130 aa		2.88	□□□□□ -1.95
CCNL1-223	ENST00000481173	CPLX4	Q7Z7G2	160 aa		2.88	□□□□□ -1.95
CCNL1-223	ENST00000481173	PLD3	Q8IV08	490 aa		2.88	□□□□□ -1.95
CCNL1-223	ENST00000481173	ARHGAP12	Q8IWW6	846 aa		2.88	□□□□□ -1.95
CCNL1-223	ENST00000481173	DNAJC22	Q8N4W6	341 aa		2.88	□□□□□ -1.95
CCNL1-223	ENST00000481173	ETNPPL	Q8TBG4	499 aa		2.88	□□□□□ -1.95
CCNL1-223	ENST00000481173	FAM222B	Q8WU58	562 aa		2.88	□□□□□ -1.95
CCNL1-223	ENST00000481173	SGCD	Q92629	289 aa		2.88	□□□□□ -1.95
CCNL1-223	ENST00000481173	GMPPA	Q96IJ6	420 aa	Predicted RBP	2.88	□□□□□ -1.95
CCNL1-223	ENST00000481173	ZNF414	Q96IQ9	312 aa		2.88	□□□□□ -1.95
CCNL1-223	ENST00000481173	IWS1	Q96ST2	819 aa		2.88	□□□□□ -1.95
CCNL1-223	ENST00000481173	GAD1	Q99259	594 aa		2.88	□□□□□ -1.95
CCNL1-223	ENST00000481173	ZNF71	Q9NQZ8	489 aa	Predicted RBP	2.88	□□□□□ -1.95
CCNL1-223	ENST00000481173	ATAD3A	Q9NVI7	634 aa		2.88	□□□□□ -1.95
CCNL1-223	ENST00000481173	C2orf42	Q9NWW7	574 aa		2.88	□□□□□ -1.95
CCNL1-223	ENST00000481173	RABGAP1	Q9Y3P9	1069 aa		2.88	□□□□□ -1.95
CCNL1-223	ENST00000481173	TMEM184B	Q9Y519	407 aa	Predicted RBP	2.88	□□□□□ -1.95
CCNL1-223	ENST00000481173	TCERG1	O14776	1098 aa	Known RBP	2.87	□□□□□ -1.95
CCNL1-223	ENST00000481173	GPR137B	O60478	399 aa		2.87	□□□□□ -1.95
CCNL1-223	ENST00000481173	DAB1	O75553	588 aa		2.87	□□□□□ -1.95
CCNL1-223	ENST00000481173	CSPG5	O95196	566 aa		2.87	□□□□□ -1.95
CCNL1-223	ENST00000481173	EML2	O95834	649 aa		2.87	□□□□□ -1.95
CCNL1-223	ENST00000481173	CLPTM1	O96005	669 aa		2.87	□□□□□ -1.95
CCNL1-223	ENST00000481173	EIF2S1	P05198	315 aa	Known RBP	2.87	□□□□□ -1.95
CCNL1-223	ENST00000481173	FRMD6-AS1	P0C7T7	363 aa		2.87	□□□□□ -1.95
CCNL1-223	ENST00000481173	ITGA3	P26006	1051 aa		2.87	□□□□□ -1.95
CCNL1-223	ENST00000481173	ACADL	P28330	430 aa		2.87	□□□□□ -1.95
CCNL1-223	ENST00000481173	CEACAM8	P31997	349 aa	Predicted RBP	2.87	□□□□□ -1.95
CCNL1-223	ENST00000481173	BMX	P51813	675 aa		2.87	□□□□□ -1.95
CCNL1-223	ENST00000481173	SNRPD1	P62314	119 aa	Known RBP	2.87	□□□□□ -1.95
CCNL1-223	ENST00000481173	MVP	Q14764	893 aa	Known RBP	2.87	□□□□□ -1.95
CCNL1-223	ENST00000481173	TST	Q16762	297 aa	Known RBP	2.87	□□□□□ -1.95
CCNL1-223	ENST00000481173	TMEM95	Q3KNT9	176 aa		2.87	□□□□□ -1.95
CCNL1-223	ENST00000481173	ZSCAN23	Q3MJ62	389 aa		2.87	□□□□□ -1.95
CCNL1-223	ENST00000481173	PWWP2B	Q6NUJ5	590 aa		2.87	□□□□□ -1.95
CCNL1-223	ENST00000481173	GLDN	Q6ZMI3	551 aa	Predicted RBP	2.87	□□□□□ -1.95
CCNL1-223	ENST00000481173	FASTKD5	Q7L8L6	764 aa	Known RBP	2.87	□□□□□ -1.95
CCNL1-223	ENST00000481173	ISCA2	Q86U28	154 aa		2.87	□□□□□ -1.95
CCNL1-223	ENST00000481173	TSPAN33	Q86UF1	283 aa		2.87	□□□□□ -1.95
CCNL1-223	ENST00000481173	ZNF440	Q8IYI8	595 aa		2.87	□□□□□ -1.95
CCNL1-223	ENST00000481173	GRHL3	Q8TE85	626 aa		2.87	□□□□□ -1.95
CCNL1-223	ENST00000481173	ELMOD3	Q96FG2	381 aa		2.87	□□□□□ -1.95
CCNL1-223	ENST00000481173	SLC47A1	Q96FL8	570 aa		2.87	□□□□□ -1.95
CCNL1-223	ENST00000481173	RTP3	Q9BQQ7	232 aa		2.87	□□□□□ -1.95
CCNL1-223	ENST00000481173	SYT11	Q9BT88	431 aa		2.87	□□□□□ -1.95
CCNL1-223	ENST00000481173	CABLES2	Q9BTV7	478 aa		2.87	□□□□□ -1.95
CCNL1-223	ENST00000481173	JMJD4	Q9H9V9	463 aa		2.87	□□□□□ -1.95
CCNL1-223	ENST00000481173	PLCXD1	Q9NUJ7	323 aa		2.87	□□□□□ -1.95
CCNL1-223	ENST00000481173	MIOS	Q9NXC5	875 aa		2.87	□□□□□ -1.95
CCNL1-223	ENST00000481173	BARHL2	Q9NY43	387 aa		2.87	□□□□□ -1.95
CCNL1-223	ENST00000481173	EXOG	Q9Y2C4	368 aa	Known RBP	2.87	□□□□□ -1.95
CCNL1-223	ENST00000481173	OGG1	O15527	345 aa		2.86	□□□□□ -1.95
CCNL1-223	ENST00000481173	GPC4	O75487	556 aa		2.86	□□□□□ -1.95
CCNL1-223	ENST00000481173	ACP2	P11117	423 aa		2.86	□□□□□ -1.95
CCNL1-223	ENST00000481173	NFKBIA	P25963	317 aa		2.86	□□□□□ -1.95
CCNL1-223	ENST00000481173	BSG	P35613	385 aa		2.86	□□□□□ -1.95
CCNL1-223	ENST00000481173	PSMC4	P43686	418 aa		2.86	□□□□□ -1.95
CCNL1-223	ENST00000481173	GPR143	P51810	404 aa		2.86	□□□□□ -1.95
CCNL1-223	ENST00000481173	TFAP4	Q01664	338 aa		2.86	□□□□□ -1.95
CCNL1-223	ENST00000481173	LRMP	Q12912	555 aa		2.86	□□□□□ -1.95
CCNL1-223	ENST00000481173	MFAP5	Q13361	173 aa		2.86	□□□□□ -1.95
CCNL1-223	ENST00000481173	EIF4A2	Q14240	407 aa	Known RBP	2.86	□□□□□ -1.95
CCNL1-223	ENST00000481173	XKR6	Q5GH73	641 aa		2.86	□□□□□ -1.95
CCNL1-223	ENST00000481173	CYP4A22	Q5TCH4	519 aa		2.86	□□□□□ -1.95
CCNL1-223	ENST00000481173	ZDHHC20	Q5W0Z9	365 aa		2.86	□□□□□ -1.95
CCNL1-223	ENST00000481173	ALS2CL	Q60I27	953 aa		2.86	□□□□□ -1.95
CCNL1-223	ENST00000481173	CLEC17A	Q6ZS10	378 aa		2.86	□□□□□ -1.95
CCNL1-223	ENST00000481173	TPRG1	Q6ZUI0	275 aa		2.86	□□□□□ -1.95
CCNL1-223	ENST00000481173	SLC16A9	Q7RTY1	509 aa		2.86	□□□□□ -1.95
CCNL1-223	ENST00000481173	GALNT13	Q8IUC8	556 aa		2.86	□□□□□ -1.95
CCNL1-223	ENST00000481173	SCML4	Q8N228	414 aa		2.86	□□□□□ -1.95
CCNL1-223	ENST00000481173	OLIG1	Q8TAK6	271 aa		2.86	□□□□□ -1.95
CCNL1-223	ENST00000481173	MOCOS	Q96EN8	888 aa		2.86	□□□□□ -1.95
CCNL1-223	ENST00000481173	C18orf12	Q96KH6	178 aa		2.86	□□□□□ -1.95
CCNL1-223	ENST00000481173	C1orf74	Q96LT6	269 aa		2.86	□□□□□ -1.95
CCNL1-223	ENST00000481173	NUDCD1	Q96RS6	583 aa		2.86	□□□□□ -1.95
CCNL1-223	ENST00000481173	DENND2D	Q9H6A0	471 aa	Predicted RBP	2.86	□□□□□ -1.95
CCNL1-223	ENST00000481173	SLA2	Q9H6Q3	261 aa		2.86	□□□□□ -1.95
CCNL1-223	ENST00000481173	SETD4	Q9NVD3	440 aa		2.86	□□□□□ -1.95
CCNL1-223	ENST00000481173	TRMT1	Q9NXH9	659 aa	Known RBP	2.86	□□□□□ -1.95
CCNL1-223	ENST00000481173	C9orf78	Q9NZ63	289 aa	Predicted RBP	2.86	□□□□□ -1.95
CCNL1-223	ENST00000481173	COQ3	Q9NZJ6	369 aa		2.86	□□□□□ -1.95
CCNL1-223	ENST00000481173	KLHL8	Q9P2G9	620 aa	Predicted RBP	2.86	□□□□□ -1.95
CCNL1-223	ENST00000481173	PIAS3	Q9Y6X2	628 aa		2.86	□□□□□ -1.95
CCNL1-223	ENST00000481173	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		2.85	□□□□□ -1.95
CCNL1-223	ENST00000481173	IGLV9-49	A0A0B4J1Y8	123 aa		2.85	□□□□□ -1.95
CCNL1-223	ENST00000481173	TMEM8B	A6NDV4	472 aa		2.85	□□□□□ -1.95
CCNL1-223	ENST00000481173		E9PQ18	207 aa		2.85	□□□□□ -1.95
CCNL1-223	ENST00000481173	DNM1L	O00429	736 aa		2.85	□□□□□ -1.95
CCNL1-223	ENST00000481173	ZNF197	O14709	1029 aa		2.85	□□□□□ -1.95
CCNL1-223	ENST00000481173	TMCC2	O75069	709 aa		2.85	□□□□□ -1.95
CCNL1-223	ENST00000481173	RTN3	O95197	1032 aa	Predicted RBP	2.85	□□□□□ -1.95
CCNL1-223	ENST00000481173	CLEC3B	P05452	202 aa		2.85	□□□□□ -1.95
CCNL1-223	ENST00000481173	RARG	P13631	454 aa		2.85	□□□□□ -1.95
CCNL1-223	ENST00000481173	WNT5A	P41221	380 aa		2.85	□□□□□ -1.95
CCNL1-223	ENST00000481173	SLC6A12	P48065	614 aa		2.85	□□□□□ -1.95
CCNL1-223	ENST00000481173	MRPS5	P82675	430 aa	Known RBP	2.85	□□□□□ -1.95
CCNL1-223	ENST00000481173	PPARD	Q03181	441 aa		2.85	□□□□□ -1.95

Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms