RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 RAVER1Q8IY67 606 aaKnown RBP6.44□□□□□ -1.38
LRCH3-216ENST00000481048 NDUFAF2Q8N183 169 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 CBARPQ8N350 705 aaPredicted RBP6.44□□□□□ -1.38
LRCH3-216ENST00000481048 BBS5Q8N3I7 341 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 FAM46DQ8NEK8 389 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 FUBP1Q96AE4 644 aaKnown RBP6.44□□□□□ -1.38
LRCH3-216ENST00000481048 PDXPQ96GD0 296 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 CELF6Q96J87 481 aaKnown RBP6.44□□□□□ -1.38
LRCH3-216ENST00000481048 EXOC2Q96KP1 924 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 SEMA3CQ99985 751 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 SYT11Q9BT88 431 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 TMEM168Q9H0V1 697 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 DPEP2Q9H4A9 486 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 DHX35Q9H5Z1 703 aaKnown RBP6.44□□□□□ -1.38
LRCH3-216ENST00000481048 WDR26Q9H7D7 661 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 ZWILCHQ9H900 591 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 EPB41L5Q9HCM4 733 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 MRPL47Q9HD33 250 aaKnown RBP6.44□□□□□ -1.38
LRCH3-216ENST00000481048 PHPT1Q9NRX4 125 aaPredicted RBP6.44□□□□□ -1.38
LRCH3-216ENST00000481048 TRNAU1APQ9NX07 287 aaKnown RBP6.44□□□□□ -1.38
LRCH3-216ENST00000481048 AIPL1Q9NZN9 384 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 SIRPGQ9P1W8 387 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 LRIT1Q9P2V4 623 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 PHTF1Q9UMS5 762 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 PPIL1Q9Y3C6 166 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 SCINQ9Y6U3 715 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 SETXQ7Z333 2677 aaKnown RBP6.44□□□□□ -1.38
LRCH3-216ENST00000481048 PTPN13Q12923 2485 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 ASH1LQ9NR48 2969 aaKnown RBP6.43□□□□□ -1.38
LRCH3-216ENST00000481048 PRSS38A1L453 326 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 TMEM202A6NGA9 273 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 CPNE6O95741 557 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 FTLP02792 175 aaPredicted RBP6.43□□□□□ -1.38
LRCH3-216ENST00000481048 PYGLP06737 847 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 MYBL1P10243 752 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 CYP2A6P11509 494 aaPredicted RBP6.43□□□□□ -1.38
LRCH3-216ENST00000481048 MYCLP1P12525 358 aaPredicted RBP6.43□□□□□ -1.38
LRCH3-216ENST00000481048 KRT10P13645 584 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 CCNB1P14635 433 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 MIPP30301 263 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 PCK1P35558 622 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 RGRP47804 291 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 B4GALNT1Q00973 533 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 OGDHQ02218 1023 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 DPTQ07507 201 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 RALGDSQ12967 914 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 LY6DQ14210 128 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 DPYSL2Q16555 572 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 STX1AQ16623 288 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 FILIP1LQ4L180 1135 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 SPECC1LQ69YQ0 1117 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 APTXQ7Z2E3 356 aaKnown RBP6.43□□□□□ -1.38
LRCH3-216ENST00000481048 CCDC103Q8IW40 242 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 Q8N1X5 172 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 PAF1Q8N7H5 531 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 FAM169BQ8N8A8 192 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 PLA2G15Q8NCC3 412 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 NSMCE1Q8WV22 266 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 OR1E3Q8WZA6 343 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 DIO2Q92813 273 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 SGF29Q96ES7 293 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 SCRN2Q96FV2 425 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 COQ10AQ96MF6 247 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 GBP4Q96PP9 640 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 NUDCD1Q96RS6 583 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 SNRNP25Q9BV90 132 aaKnown RBP6.43□□□□□ -1.38
LRCH3-216ENST00000481048 TEX101Q9BY14 249 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 GSDMCQ9BYG8 508 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 NAT10Q9H0A0 1025 aaKnown RBP6.43□□□□□ -1.38
LRCH3-216ENST00000481048 SYNDIG1Q9H7V2 258 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 FGF22Q9HCT0 170 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 PCSK1NQ9UHG2 260 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 DNPEPQ9ULA0 475 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 COA3Q9Y2R0 106 aaPredicted RBP6.43□□□□□ -1.38
LRCH3-216ENST00000481048 LOXL2Q9Y4K0 774 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 X6R8D5 127 aa6.43□□□□□ -1.38
LRCH3-216ENST00000481048 RHPN2P1A8MT19 583 aa6.42□□□□□ -1.38
LRCH3-216ENST00000481048 SMTNL1A8MU46 457 aa6.42□□□□□ -1.38
LRCH3-216ENST00000481048 GOLGA6L22H0YM25 854 aa6.42□□□□□ -1.38
LRCH3-216ENST00000481048 DFFAO00273 331 aa6.42□□□□□ -1.38
LRCH3-216ENST00000481048 GPR42O15529 346 aa6.42□□□□□ -1.38
LRCH3-216ENST00000481048 B4GAT1O43505 415 aa6.42□□□□□ -1.38
LRCH3-216ENST00000481048 MAFKO60675 156 aa6.42□□□□□ -1.38
LRCH3-216ENST00000481048 LRCH4O75427 683 aa6.42□□□□□ -1.38
LRCH3-216ENST00000481048 IVLP07476 585 aa6.42□□□□□ -1.38
LRCH3-216ENST00000481048 GM2AP17900 193 aa6.42□□□□□ -1.38
LRCH3-216ENST00000481048 CR2P20023 1033 aa6.42□□□□□ -1.38
LRCH3-216ENST00000481048 SERPINB6P35237 376 aa6.42□□□□□ -1.38
LRCH3-216ENST00000481048 PRKCIP41743 596 aa6.42□□□□□ -1.38
LRCH3-216ENST00000481048 CDH6P55285 790 aa6.42□□□□□ -1.38
LRCH3-216ENST00000481048 ILF3Q12906 894 aaKnown RBP eCLIP6.42□□□□□ -1.385e-7■■■□□ 19.1
LRCH3-216ENST00000481048 DPYSQ14117 519 aa6.42□□□□□ -1.38
LRCH3-216ENST00000481048 PIGHQ14442 188 aaPredicted RBP6.42□□□□□ -1.38
LRCH3-216ENST00000481048 ZNF235Q14590 738 aa6.42□□□□□ -1.38
LRCH3-216ENST00000481048 NCAPHQ15003 741 aa6.42□□□□□ -1.38
LRCH3-216ENST00000481048 ACOX1Q15067 660 aa6.42□□□□□ -1.38
LRCH3-216ENST00000481048 CA9Q16790 459 aa6.42□□□□□ -1.38
LRCH3-216ENST00000481048 PPP6R3Q5H9R7 873 aaPredicted RBP6.42□□□□□ -1.38
LRCH3-216ENST00000481048 MANEAQ5SRI9 462 aa6.42□□□□□ -1.38
LRCH3-216ENST00000481048 KIAA1614Q5VZ46 1190 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms