RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 AKR1B15C9JRZ8 316 aaPredicted RBP13.24□□□□□ -0.29
CHD3-209ENST00000473376 GAPDHSO14556 408 aaPredicted RBP13.24□□□□□ -0.29
CHD3-209ENST00000473376 STX7O15400 261 aaKnown RBP13.24□□□□□ -0.29
CHD3-209ENST00000473376 KIF1CO43896 1103 aaKnown RBP13.24□□□□□ -0.29
CHD3-209ENST00000473376 RFPL1O75677 317 aa13.24□□□□□ -0.29
CHD3-209ENST00000473376 ZBTB11O95625 1053 aaPredicted RBP13.24□□□□□ -0.29
CHD3-209ENST00000473376 SLC4A1P02730 911 aa13.24□□□□□ -0.29
CHD3-209ENST00000473376 GSTM1P09488 218 aa13.24□□□□□ -0.29
CHD3-209ENST00000473376 MTHFD1P11586 935 aaKnown RBP13.24□□□□□ -0.29
CHD3-209ENST00000473376 PECAM1P16284 738 aaPredicted RBP13.24□□□□□ -0.29
CHD3-209ENST00000473376 LPOP22079 712 aaPredicted RBP13.24□□□□□ -0.29
CHD3-209ENST00000473376 GEMP55040 296 aa13.24□□□□□ -0.29
CHD3-209ENST00000473376 TUBB4BP68371 445 aa13.24□□□□□ -0.29
CHD3-209ENST00000473376 GSTM4Q03013 218 aa13.24□□□□□ -0.29
CHD3-209ENST00000473376 SRSF1Q07955 248 aaKnown RBP eCLIP13.24□□□□□ -0.29
CHD3-209ENST00000473376 TBX2Q13207 712 aaPredicted RBP13.24□□□□□ -0.29
CHD3-209ENST00000473376 TUBB3Q13509 450 aa13.24□□□□□ -0.29
CHD3-209ENST00000473376 DNASE1L3Q13609 305 aa13.24□□□□□ -0.29
CHD3-209ENST00000473376 TUBB2AQ13885 445 aa13.24□□□□□ -0.29
CHD3-209ENST00000473376 UBAP2LQ14157 1087 aaKnown RBP13.24□□□□□ -0.29
CHD3-209ENST00000473376 PLA2G4EQ3MJ16 856 aa13.24□□□□□ -0.29
CHD3-209ENST00000473376 COLEC12Q5KU26 742 aa13.24□□□□□ -0.29
CHD3-209ENST00000473376 TMEM220Q6QAJ8 160 aa13.24□□□□□ -0.29
CHD3-209ENST00000473376 SYVN1Q86TM6 617 aa13.24□□□□□ -0.29
CHD3-209ENST00000473376 PTRH1Q86Y79 214 aaKnown RBP13.24□□□□□ -0.29
CHD3-209ENST00000473376 CCDC170Q8IYT3 715 aa13.24□□□□□ -0.29
CHD3-209ENST00000473376 TUBB2BQ9BVA1 445 aa13.24□□□□□ -0.29
CHD3-209ENST00000473376 KIR3DX1Q9H7L2 352 aa13.24□□□□□ -0.29
CHD3-209ENST00000473376 SAE1Q9UBE0 346 aaPredicted RBP13.24□□□□□ -0.29
CHD3-209ENST00000473376 BTRCQ9Y297 605 aa13.24□□□□□ -0.29
CHD3-209ENST00000473376 COLEC10Q9Y6Z7 277 aa13.24□□□□□ -0.29
CHD3-209ENST00000473376 IGHV5-51A0A0C4DH38 117 aa13.23□□□□□ -0.29
CHD3-209ENST00000473376 PYCARD-AS1I3L0S3 204 aa13.23□□□□□ -0.29
CHD3-209ENST00000473376 RALBP11234 206 aa13.23□□□□□ -0.29
CHD3-209ENST00000473376 MSH3P20585 1137 aa13.23□□□□□ -0.29
CHD3-209ENST00000473376 PTPN7P35236 360 aa13.23□□□□□ -0.29
CHD3-209ENST00000473376 CTSCP53634 463 aa13.23□□□□□ -0.29
CHD3-209ENST00000473376 SEMA5AQ13591 1074 aa13.23□□□□□ -0.29
CHD3-209ENST00000473376 SKIDA1Q1XH10 827 aa13.23□□□□□ -0.29
CHD3-209ENST00000473376 TMTC4Q5T4D3 741 aa13.23□□□□□ -0.29
CHD3-209ENST00000473376 IZUMO3Q5VZ72 239 aa13.23□□□□□ -0.29
CHD3-209ENST00000473376 C16orf46Q6P387 395 aa13.23□□□□□ -0.29
CHD3-209ENST00000473376 FAM151BQ6UXP7 276 aa13.23□□□□□ -0.29
CHD3-209ENST00000473376 FAM92BQ6ZTR7 304 aa13.23□□□□□ -0.29
CHD3-209ENST00000473376 ZC3H18Q86VM9 953 aaKnown RBP13.23□□□□□ -0.29
CHD3-209ENST00000473376 OOSP2Q86WS3 158 aa13.23□□□□□ -0.29
CHD3-209ENST00000473376 HPS6Q86YV9 775 aa13.23□□□□□ -0.29
CHD3-209ENST00000473376 BLOC1S5Q8TDH9 187 aa13.23□□□□□ -0.29
CHD3-209ENST00000473376 ULK4Q96C45 1275 aa13.23□□□□□ -0.29
CHD3-209ENST00000473376 LRRC45Q96CN5 670 aa13.23□□□□□ -0.29
CHD3-209ENST00000473376 GBA3Q9H227 469 aa13.23□□□□□ -0.29
CHD3-209ENST00000473376 ARNT2Q9HBZ2 717 aa13.23□□□□□ -0.29
CHD3-209ENST00000473376 FGF21Q9NSA1 209 aa13.23□□□□□ -0.29
CHD3-209ENST00000473376 RSPH14Q9UHP6 348 aa13.23□□□□□ -0.29
CHD3-209ENST00000473376 LNPEPQ9UIQ6 1025 aa13.23□□□□□ -0.29
CHD3-209ENST00000473376 PCDHGB7Q9Y5F8 929 aa13.23□□□□□ -0.29
CHD3-209ENST00000473376 PCDHGA9Q9Y5G4 932 aaKnown RBP13.23□□□□□ -0.29
CHD3-209ENST00000473376 UGT1A9O60656 530 aa13.22□□□□□ -0.29
CHD3-209ENST00000473376 CPNE3O75131 537 aaKnown RBP13.22□□□□□ -0.29
CHD3-209ENST00000473376 SRP72O76094 671 aaKnown RBP13.22□□□□□ -0.29
CHD3-209ENST00000473376 PRAMEF1O95521 474 aa13.22□□□□□ -0.29
CHD3-209ENST00000473376 CRTAMO95727 393 aa13.22□□□□□ -0.29
CHD3-209ENST00000473376 NTRK1P04629 796 aa13.22□□□□□ -0.29
CHD3-209ENST00000473376 RAB40ALP0C0E4 278 aa13.22□□□□□ -0.29
CHD3-209ENST00000473376 FOLR1P15328 257 aa13.22□□□□□ -0.29
CHD3-209ENST00000473376 UGT1A6P19224 532 aa13.22□□□□□ -0.29
CHD3-209ENST00000473376 UGT1A1P22309 533 aa13.22□□□□□ -0.29
CHD3-209ENST00000473376 UGT1A4P22310 534 aa13.22□□□□□ -0.29
CHD3-209ENST00000473376 PTPN4P29074 926 aa13.22□□□□□ -0.29
CHD3-209ENST00000473376 ADRA1AP35348 466 aa13.22□□□□□ -0.29
CHD3-209ENST00000473376 HADHAP40939 763 aa13.22□□□□□ -0.29
CHD3-209ENST00000473376 MAGEA1P43355 309 aa13.22□□□□□ -0.29
CHD3-209ENST00000473376 CHRNA4P43681 627 aa13.22□□□□□ -0.29
CHD3-209ENST00000473376 CD151P48509 253 aa13.22□□□□□ -0.29
CHD3-209ENST00000473376 ARL4DP49703 201 aa13.22□□□□□ -0.29
CHD3-209ENST00000473376 GSDMDP57764 484 aa13.22□□□□□ -0.29
CHD3-209ENST00000473376 RPS15P62841 145 aaKnown RBP13.22□□□□□ -0.29
CHD3-209ENST00000473376 ADCY2Q08462 1091 aa13.22□□□□□ -0.29
CHD3-209ENST00000473376 ERV3-1Q14264 604 aa13.22□□□□□ -0.29
CHD3-209ENST00000473376 NFE2L1Q14494 772 aa13.22□□□□□ -0.29
CHD3-209ENST00000473376 NOMO1Q15155 1222 aa13.22□□□□□ -0.29
CHD3-209ENST00000473376 UGT8Q16880 541 aa13.22□□□□□ -0.29
CHD3-209ENST00000473376 GPR33Q49SQ1 333 aa13.22□□□□□ -0.29
CHD3-209ENST00000473376 DNTTIP2Q5QJE6 756 aaKnown RBP13.22□□□□□ -0.29
CHD3-209ENST00000473376 PAPD7Q5XG87 772 aaKnown RBP13.22□□□□□ -0.29
CHD3-209ENST00000473376 CAPRIN2Q6IMN6 1127 aaKnown RBP13.22□□□□□ -0.29
CHD3-209ENST00000473376 PWWP2BQ6NUJ5 590 aa13.22□□□□□ -0.29
CHD3-209ENST00000473376 KLHDC8BQ8IXV7 354 aa13.22□□□□□ -0.29
CHD3-209ENST00000473376 SLC25A41Q8N5S1 370 aa13.22□□□□□ -0.29
CHD3-209ENST00000473376 TEX19Q8NA77 164 aa13.22□□□□□ -0.29
CHD3-209ENST00000473376 IPMKQ8NFU5 416 aa13.22□□□□□ -0.29
CHD3-209ENST00000473376 HAUS1Q96CS2 278 aa13.22□□□□□ -0.29
CHD3-209ENST00000473376 UGT1A7Q9HAW7 530 aa13.22□□□□□ -0.29
CHD3-209ENST00000473376 UGT1A10Q9HAW8 530 aa13.22□□□□□ -0.29
CHD3-209ENST00000473376 UGT1A8Q9HAW9 530 aa13.22□□□□□ -0.29
CHD3-209ENST00000473376 MLXIPLQ9NP71 852 aa13.22□□□□□ -0.29
CHD3-209ENST00000473376 ZNF71Q9NQZ8 489 aaPredicted RBP13.22□□□□□ -0.29
CHD3-209ENST00000473376 C1GALT1Q9NS00 363 aa13.22□□□□□ -0.29
CHD3-209ENST00000473376 KCND1Q9NSA2 647 aa13.22□□□□□ -0.29
CHD3-209ENST00000473376 HRASLS2Q9NWW9 162 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms