RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 NME5P56597 212 aa6.49□□□□□ -1.37
SMC5-202ENST00000471372 POLR2LP62875 67 aaKnown RBP6.49□□□□□ -1.37
SMC5-202ENST00000471372 IL1RL1Q01638 556 aa6.49□□□□□ -1.37
SMC5-202ENST00000471372 TROAPQ12815 778 aa6.49□□□□□ -1.37
SMC5-202ENST00000471372 FOXF2Q12947 444 aa6.49□□□□□ -1.37
SMC5-202ENST00000471372 LBHQ53QV2 105 aaPredicted RBP6.49□□□□□ -1.37
SMC5-202ENST00000471372 C18orf63Q68DL7 685 aa6.49□□□□□ -1.37
SMC5-202ENST00000471372 Q6ZSV7 163 aa6.49□□□□□ -1.37
SMC5-202ENST00000471372 ACVR1CQ8NER5 493 aa6.49□□□□□ -1.37
SMC5-202ENST00000471372 C9orf43Q8TAL5 461 aaPredicted RBP6.49□□□□□ -1.37
SMC5-202ENST00000471372 NSMAFQ92636 917 aa6.49□□□□□ -1.37
SMC5-202ENST00000471372 TEKT1Q969V4 418 aa6.49□□□□□ -1.37
SMC5-202ENST00000471372 SLAMF9Q96A28 289 aa6.49□□□□□ -1.37
SMC5-202ENST00000471372 MIB2Q96AX9 1013 aa6.49□□□□□ -1.37
SMC5-202ENST00000471372 SEPHS2Q99611 448 aa6.49□□□□□ -1.37
SMC5-202ENST00000471372 CPNE1Q99829 537 aa6.49□□□□□ -1.37
SMC5-202ENST00000471372 KXD1Q9BQD3 176 aa6.49□□□□□ -1.37
SMC5-202ENST00000471372 FNDC11Q9BVV2 318 aa6.49□□□□□ -1.37
SMC5-202ENST00000471372 SEZ6LQ9BYH1 1024 aa6.49□□□□□ -1.37
SMC5-202ENST00000471372 DPAGT1Q9H3H5 408 aa6.49□□□□□ -1.37
SMC5-202ENST00000471372 TUFT1Q9NNX1 390 aa6.49□□□□□ -1.37
SMC5-202ENST00000471372 LEF1Q9UJU2 399 aaPredicted RBP6.49□□□□□ -1.37
SMC5-202ENST00000471372 ITGA11Q9UKX5 1188 aa6.49□□□□□ -1.37
SMC5-202ENST00000471372 INSL6Q9Y581 213 aa6.49□□□□□ -1.37
SMC5-202ENST00000471372 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.49□□□□□ -1.37
SMC5-202ENST00000471372 GAGE12JA6NER3 117 aa6.48□□□□□ -1.37
SMC5-202ENST00000471372 TMEM221A6NGB7 291 aa6.48□□□□□ -1.37
SMC5-202ENST00000471372 C5orf52A6NGY3 159 aa6.48□□□□□ -1.37
SMC5-202ENST00000471372 CLDN4O14493 209 aa6.48□□□□□ -1.37
SMC5-202ENST00000471372 EIF3DO15371 548 aaKnown RBP eCLIP6.48□□□□□ -1.37
SMC5-202ENST00000471372 TSPAN1O60635 241 aa6.48□□□□□ -1.37
SMC5-202ENST00000471372 NDUFS7O75251 213 aa6.48□□□□□ -1.37
SMC5-202ENST00000471372 MED24O75448 989 aa6.48□□□□□ -1.37
SMC5-202ENST00000471372 ACSL3O95573 720 aa6.48□□□□□ -1.37
SMC5-202ENST00000471372 EEF1B2P24534 225 aaKnown RBP6.48□□□□□ -1.37
SMC5-202ENST00000471372 WNT5AP41221 380 aa6.48□□□□□ -1.37
SMC5-202ENST00000471372 CD86P42081 329 aa6.48□□□□□ -1.37
SMC5-202ENST00000471372 CLDN20P56880 219 aa6.48□□□□□ -1.37
SMC5-202ENST00000471372 CD81P60033 236 aa6.48□□□□□ -1.37
SMC5-202ENST00000471372 STX1BP61266 288 aa6.48□□□□□ -1.37
SMC5-202ENST00000471372 MTX1Q13505 466 aa6.48□□□□□ -1.37
SMC5-202ENST00000471372 HFEQ30201 348 aa6.48□□□□□ -1.37
SMC5-202ENST00000471372 PPP6R3Q5H9R7 873 aaPredicted RBP6.48□□□□□ -1.37
SMC5-202ENST00000471372 PAPPA-AS1Q5QFB9 102 aa6.48□□□□□ -1.37
SMC5-202ENST00000471372 DCAF12L2Q5VW00 463 aa6.48□□□□□ -1.37
SMC5-202ENST00000471372 PARM1Q6UWI2 310 aa6.48□□□□□ -1.37
SMC5-202ENST00000471372 NHLRC1Q6VVB1 395 aa6.48□□□□□ -1.37
SMC5-202ENST00000471372 DBX2Q6ZNG2 339 aa6.48□□□□□ -1.37
SMC5-202ENST00000471372 ZNF788Q6ZQV5 615 aa6.48□□□□□ -1.37
SMC5-202ENST00000471372 ZNF367Q7RTV3 350 aa6.48□□□□□ -1.37
SMC5-202ENST00000471372 CTU1Q7Z7A3 348 aaKnown RBP6.48□□□□□ -1.37
SMC5-202ENST00000471372 DZIP1Q86YF9 867 aaKnown RBP6.48□□□□□ -1.37
SMC5-202ENST00000471372 ANKRD13BQ86YJ7 626 aa6.48□□□□□ -1.37
SMC5-202ENST00000471372 CNGA4Q8IV77 575 aa6.48□□□□□ -1.37
SMC5-202ENST00000471372 PEX5LQ8IYB4 626 aa6.48□□□□□ -1.37
SMC5-202ENST00000471372 PM20D2Q8IYS1 436 aa6.48□□□□□ -1.37
SMC5-202ENST00000471372 OR7G3Q8NG95 312 aa6.48□□□□□ -1.37
SMC5-202ENST00000471372 UTP15Q8TED0 518 aaKnown RBP6.48□□□□□ -1.37
SMC5-202ENST00000471372 ATL1Q8WXF7 558 aa6.48□□□□□ -1.37
SMC5-202ENST00000471372 FAM81BQ96LP2 452 aa6.48□□□□□ -1.37
SMC5-202ENST00000471372 NLRP4Q96MN2 994 aa6.48□□□□□ -1.37
SMC5-202ENST00000471372 FEVQ99581 238 aa6.48□□□□□ -1.37
SMC5-202ENST00000471372 IARS2Q9NSE4 1012 aaKnown RBP6.48□□□□□ -1.37
SMC5-202ENST00000471372 OSER1Q9NX31 292 aa6.48□□□□□ -1.37
SMC5-202ENST00000471372 FBXL2Q9UKC9 423 aa6.48□□□□□ -1.37
SMC5-202ENST00000471372 A0A1W2PPQ1 181 aa6.47□□□□□ -1.37
SMC5-202ENST00000471372 SELENOFO60613 162 aa6.47□□□□□ -1.37
SMC5-202ENST00000471372 PROP1O75360 226 aa6.47□□□□□ -1.37
SMC5-202ENST00000471372 B3GALNT1O75752 331 aa6.47□□□□□ -1.37
SMC5-202ENST00000471372 MOCS3O95396 460 aa6.47□□□□□ -1.37
SMC5-202ENST00000471372 SLC4A1P02730 911 aa6.47□□□□□ -1.37
SMC5-202ENST00000471372 RLN1P04808 185 aa6.47□□□□□ -1.37
SMC5-202ENST00000471372 KCNA5P22460 613 aa6.47□□□□□ -1.37
SMC5-202ENST00000471372 MPZP25189 248 aa6.47□□□□□ -1.37
SMC5-202ENST00000471372 STX2P32856 288 aa6.47□□□□□ -1.37
SMC5-202ENST00000471372 SLC12A3P55017 1021 aa6.47□□□□□ -1.37
SMC5-202ENST00000471372 UBASH3AP57075 661 aa6.47□□□□□ -1.37
SMC5-202ENST00000471372 ST8SIA6P61647 398 aa6.47□□□□□ -1.37
SMC5-202ENST00000471372 NHLH1Q02575 133 aa6.47□□□□□ -1.37
SMC5-202ENST00000471372 NPRL3Q12980 569 aa6.47□□□□□ -1.37
SMC5-202ENST00000471372 NR1D2Q14995 579 aa6.47□□□□□ -1.37
SMC5-202ENST00000471372 DAZAP2Q15038 168 aaPredicted RBP6.47□□□□□ -1.37
SMC5-202ENST00000471372 SLC39A14Q15043 492 aa6.47□□□□□ -1.37
SMC5-202ENST00000471372 SLC27A1Q6PCB7 646 aa6.47□□□□□ -1.37
SMC5-202ENST00000471372 KCTD9Q7L273 389 aa6.47□□□□□ -1.37
SMC5-202ENST00000471372 CATSPER4Q7RTX7 472 aa6.47□□□□□ -1.37
SMC5-202ENST00000471372 CNTN4Q8IWV2 1026 aa6.47□□□□□ -1.37
SMC5-202ENST00000471372 GCSAMQ8N6F7 178 aa6.47□□□□□ -1.37
SMC5-202ENST00000471372 FAM98AQ8NCA5 519 aaKnown RBP6.47□□□□□ -1.37
SMC5-202ENST00000471372 PCYT2Q99447 389 aa6.47□□□□□ -1.37
SMC5-202ENST00000471372 HNRNPABQ99729 332 aaKnown RBP6.47□□□□□ -1.37
SMC5-202ENST00000471372 QTRT1Q9BXR0 403 aaKnown RBP6.47□□□□□ -1.37
SMC5-202ENST00000471372 ZNF350Q9GZX5 532 aa6.47□□□□□ -1.37
SMC5-202ENST00000471372 MINDY3Q9H8M7 445 aa6.47□□□□□ -1.37
SMC5-202ENST00000471372 C17orf75Q9HAS0 396 aa6.47□□□□□ -1.37
SMC5-202ENST00000471372 MCM9Q9NXL9 1143 aa6.47□□□□□ -1.37
SMC5-202ENST00000471372 DPP3Q9NY33 737 aa6.47□□□□□ -1.37
SMC5-202ENST00000471372 RCC2Q9P258 522 aaKnown RBP6.47□□□□□ -1.37
SMC5-202ENST00000471372 PADI2Q9Y2J8 665 aa6.47□□□□□ -1.37
SMC5-202ENST00000471372 INO80B-WBP1J3KQ70 363 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms