RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 CNOT6Q9ULM6 557 aaKnown RBP4.81□□□□□ -1.64
SF3B1-207ENST00000468925 ZNRF3Q9ULT6 936 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 PCDHGB4Q9UN71 923 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 DIMT1Q9UNQ2 313 aaKnown RBP4.81□□□□□ -1.64
SF3B1-207ENST00000468925 ERVW-1Q9UQF0 538 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 VWA7Q9Y334 891 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 AFG3L2Q9Y4W6 797 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 RIPK3Q9Y572 518 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 PCDHGB5Q9Y5G0 923 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 CACNG2Q9Y698 323 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 NRXN3Q9Y4C0 1643 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 ZNFX1Q9P2E3 1918 aaKnown RBP4.81□□□□□ -1.64
SF3B1-207ENST00000468925 STRCP1A6NGW2 1772 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 SCN11AQ9UI33 1791 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 TNS3Q68CZ2 1445 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 CROCCQ5TZA2 2017 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 ASTN1O14525 1302 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 CNTNAP2Q9UHC6 1331 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 CYP3A7-CYP3A51PA0A087WV96 503 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 PQLC2LA1A4F0 135 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 C2orf71A6NGG8 1288 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 DBX1A6NMT0 343 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 LEUTXA8MZ59 168 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 E7ENX8 843 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 SNAP23O00161 211 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 KPNA3O00505 521 aaPredicted RBP4.8□□□□□ -1.64
SF3B1-207ENST00000468925 PRRG2O14669 202 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 ABCD4O14678 606 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 PROM1O43490 865 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 CA12O43570 354 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 SYNCRIPO60506 623 aaKnown RBP4.8□□□□□ -1.64
SF3B1-207ENST00000468925 GMDSO60547 372 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 TRIM13O60858 407 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 ATG13O75143 517 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 SRP72O76094 671 aaKnown RBP4.8□□□□□ -1.64
SF3B1-207ENST00000468925 SLITRK3O94933 977 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 SOX30O94993 753 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 KCNK2O95069 426 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 LDOC1O95751 146 aaPredicted RBP4.8□□□□□ -1.64
SF3B1-207ENST00000468925 TOP3BO95985 862 aaKnown RBP4.8□□□□□ -1.64
SF3B1-207ENST00000468925 LDLRP01130 860 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 NPPAP01160 153 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 FTH1P02794 183 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 ALPPP05187 535 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 ASNSP08243 561 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 ZNF865P0CJ78 1059 aaPredicted RBP4.8□□□□□ -1.64
SF3B1-207ENST00000468925 ENO3P13929 434 aaPredicted RBP4.8□□□□□ -1.64
SF3B1-207ENST00000468925 NPR1P16066 1061 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 ZNF30P17039 623 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 TYRP1P17643 537 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 FGFR2P21802 821 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 CYP3A7P24462 503 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 PSMA2P25787 234 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 AXLP30530 894 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 NTF4P34130 210 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 RFC4P35249 363 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 RORAP35398 523 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 HSD17B2P37059 387 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 SLC15A1P46059 708 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 CENPAP49450 140 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 STARP49675 285 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 GZMKP49863 264 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 CPT1AP50416 773 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 RPL14P50914 215 aaKnown RBP4.8□□□□□ -1.64
SF3B1-207ENST00000468925 TPMTP51580 245 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 ALDH3A2P51648 485 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 GBX2P52951 348 aaPredicted RBP4.8□□□□□ -1.64
SF3B1-207ENST00000468925 ZNF280AP59817 542 aaPredicted RBP4.8□□□□□ -1.64
SF3B1-207ENST00000468925 UBXN2AP68543 259 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 RBP5P82980 135 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 MS4A2Q01362 244 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 IFITM3Q01628 133 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 FMO1Q01740 532 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 RELQ04864 619 aaPredicted RBP4.8□□□□□ -1.64
SF3B1-207ENST00000468925 MAMLD1Q13495 774 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 GPR50Q13585 617 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 POLD3Q15054 466 aaPredicted RBP4.8□□□□□ -1.64
SF3B1-207ENST00000468925 GEN1Q17RS7 908 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 COL28A1Q2UY09 1125 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 Q3ZCU0 254 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 PARP15Q460N3 678 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 EPC2Q52LR7 807 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 GPAT3Q53EU6 434 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 HSD17B12Q53GQ0 312 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 TOR2AQ5JU69 321 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 XAF1Q6GPH4 301 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 DENND5AQ6IQ26 1287 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 RETSATQ6NUM9 610 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 ZYG11AQ6WRX3 759 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 RHOUQ7L0Q8 258 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 CATSPER4Q7RTX7 472 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 PAGE2Q7Z2X7 111 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 KRT73Q86Y46 540 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 PHF13Q86YI8 300 aaPredicted RBP4.8□□□□□ -1.64
SF3B1-207ENST00000468925 BBS7Q8IWZ6 715 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 SPACA3Q8IXA5 215 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 FAM178BQ8IXR5 827 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 DDIASQ8IXT1 998 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 LRRC47Q8N1G4 583 aaKnown RBP4.8□□□□□ -1.64
SF3B1-207ENST00000468925 METTL4Q8N3J2 472 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms