RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 BANF1O75531 89 aa13.35□□□□□ -0.27
SSBP1-206ENST00000467681 TTC4O95801 387 aa13.35□□□□□ -0.27
SSBP1-206ENST00000467681 POLBP06746 335 aa13.35□□□□□ -0.27
SSBP1-206ENST00000467681 CTAGE8P0CG41 777 aa13.35□□□□□ -0.27
SSBP1-206ENST00000467681 SPINK2P20155 84 aa13.35□□□□□ -0.27
SSBP1-206ENST00000467681 ALDH4A1P30038 563 aa13.35□□□□□ -0.27
SSBP1-206ENST00000467681 PBLDP30039 288 aaPredicted RBP13.35□□□□□ -0.27
SSBP1-206ENST00000467681 CLDN6P56747 220 aa13.35□□□□□ -0.27
SSBP1-206ENST00000467681 OR1D5P58170 312 aa13.35□□□□□ -0.27
SSBP1-206ENST00000467681 UBE2IP63279 158 aaKnown RBP13.35□□□□□ -0.27
SSBP1-206ENST00000467681 CALCOCO2Q13137 446 aa13.35□□□□□ -0.27
SSBP1-206ENST00000467681 SQSTM1Q13501 440 aa13.35□□□□□ -0.27
SSBP1-206ENST00000467681 HIF1AQ16665 826 aa13.35□□□□□ -0.27
SSBP1-206ENST00000467681 LONRF1Q17RB8 773 aa13.35□□□□□ -0.27
SSBP1-206ENST00000467681 HES3Q5TGS1 186 aa13.35□□□□□ -0.27
SSBP1-206ENST00000467681 SPRED1Q7Z699 444 aa13.35□□□□□ -0.27
SSBP1-206ENST00000467681 CTAGE6Q86UF2 777 aa13.35□□□□□ -0.27
SSBP1-206ENST00000467681 CTAGE4Q8IX94 777 aa13.35□□□□□ -0.27
SSBP1-206ENST00000467681 DCBLD1Q8N8Z6 715 aa13.35□□□□□ -0.27
SSBP1-206ENST00000467681 HM13Q8TCT9 377 aa13.35□□□□□ -0.27
SSBP1-206ENST00000467681 LRRC39Q96DD0 335 aa13.35□□□□□ -0.27
SSBP1-206ENST00000467681 LRRC1Q9BTT6 524 aa13.35□□□□□ -0.27
SSBP1-206ENST00000467681 CARD6Q9BX69 1037 aa13.35□□□□□ -0.27
SSBP1-206ENST00000467681 RAB17Q9H0T7 212 aa13.35□□□□□ -0.27
SSBP1-206ENST00000467681 GRHL1Q9NZI5 618 aa13.35□□□□□ -0.27
SSBP1-206ENST00000467681 KLK13Q9UKR3 277 aa13.35□□□□□ -0.27
SSBP1-206ENST00000467681 ANGPTL2Q9UKU9 493 aa13.35□□□□□ -0.27
SSBP1-206ENST00000467681 MSRB2Q9Y3D2 182 aa13.35□□□□□ -0.27
SSBP1-206ENST00000467681 NEUROG3Q9Y4Z2 214 aa13.35□□□□□ -0.27
SSBP1-206ENST00000467681 ZNF106Q9H2Y7 1883 aaKnown RBP13.34□□□□□ -0.27
SSBP1-206ENST00000467681 E7ESA3 106 aa13.34□□□□□ -0.27
SSBP1-206ENST00000467681 CASC3O15234 703 aaKnown RBP13.34□□□□□ -0.27
SSBP1-206ENST00000467681 TCEA3O75764 348 aa13.34□□□□□ -0.27
SSBP1-206ENST00000467681 S1PR4O95977 384 aa13.34□□□□□ -0.27
SSBP1-206ENST00000467681 VIPP01282 170 aa13.34□□□□□ -0.27
SSBP1-206ENST00000467681 FTH1P02794 183 aa13.34□□□□□ -0.27
SSBP1-206ENST00000467681 RPLP0P05388 317 aaKnown RBP13.34□□□□□ -0.27
SSBP1-206ENST00000467681 OR56A5P0C7T3 313 aa13.34□□□□□ -0.27
SSBP1-206ENST00000467681 OGNP20774 298 aaKnown RBP13.34□□□□□ -0.27
SSBP1-206ENST00000467681 RPS3P23396 243 aaKnown RBP eCLIP13.34□□□□□ -0.274e-7■■□□□ 12.1
SSBP1-206ENST00000467681 ELK3P41970 407 aa13.34□□□□□ -0.27
SSBP1-206ENST00000467681 SLC7A5Q01650 507 aa13.34□□□□□ -0.27
SSBP1-206ENST00000467681 HHEXQ03014 270 aa13.34□□□□□ -0.27
SSBP1-206ENST00000467681 RPA4Q13156 261 aa13.34□□□□□ -0.27
SSBP1-206ENST00000467681 THOC5Q13769 683 aaKnown RBP13.34□□□□□ -0.27
SSBP1-206ENST00000467681 TRADDQ15628 312 aa13.34□□□□□ -0.27
SSBP1-206ENST00000467681 SEPT7Q16181 437 aaKnown RBP13.34□□□□□ -0.27
SSBP1-206ENST00000467681 RPE65Q16518 533 aa13.34□□□□□ -0.27
SSBP1-206ENST00000467681 CLPPQ16740 277 aaPredicted RBP13.34□□□□□ -0.27
SSBP1-206ENST00000467681 TYSND1Q2T9J0 566 aa13.34□□□□□ -0.27
SSBP1-206ENST00000467681 SPANXN3Q5MJ09 141 aa13.34□□□□□ -0.27
SSBP1-206ENST00000467681 HP1BP3Q5SSJ5 553 aaPredicted RBP13.34□□□□□ -0.27
SSBP1-206ENST00000467681 CAPRIN2Q6IMN6 1127 aaKnown RBP13.34□□□□□ -0.27
SSBP1-206ENST00000467681 CENPUQ71F23 418 aa13.34□□□□□ -0.27
SSBP1-206ENST00000467681 LRRC6Q86X45 466 aa13.34□□□□□ -0.27
SSBP1-206ENST00000467681 MARCH9Q86YJ5 346 aa13.34□□□□□ -0.27
SSBP1-206ENST00000467681 CILP2Q8IUL8 1156 aa13.34□□□□□ -0.27
SSBP1-206ENST00000467681 LILRA3Q8N6C8 439 aaPredicted RBP13.34□□□□□ -0.27
SSBP1-206ENST00000467681 OTUD6BQ8N6M0 293 aa13.34□□□□□ -0.27
SSBP1-206ENST00000467681 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.34□□□□□ -0.27
SSBP1-206ENST00000467681 ART4Q93070 314 aa13.34□□□□□ -0.27
SSBP1-206ENST00000467681 INSM2Q96T92 566 aaPredicted RBP13.34□□□□□ -0.27
SSBP1-206ENST00000467681 SLC38A3Q99624 504 aa13.34□□□□□ -0.27
SSBP1-206ENST00000467681 P2RY12Q9H244 342 aa13.34□□□□□ -0.27
SSBP1-206ENST00000467681 UCK1Q9HA47 277 aa13.34□□□□□ -0.27
SSBP1-206ENST00000467681 PLAC1Q9HBJ0 212 aa13.34□□□□□ -0.27
SSBP1-206ENST00000467681 C20orf96Q9NUD7 363 aaPredicted RBP13.34□□□□□ -0.27
SSBP1-206ENST00000467681 CLCA2Q9UQC9 943 aa13.34□□□□□ -0.27
SSBP1-206ENST00000467681 TEX264Q9Y6I9 313 aa13.34□□□□□ -0.27
SSBP1-206ENST00000467681 FAM149AA5PLN7 773 aa13.33□□□□□ -0.28
SSBP1-206ENST00000467681 OR52A4PA6NMU1 304 aa13.33□□□□□ -0.28
SSBP1-206ENST00000467681 PFDN6O15212 129 aa13.33□□□□□ -0.28
SSBP1-206ENST00000467681 CD1CP29017 333 aa13.33□□□□□ -0.28
SSBP1-206ENST00000467681 HALP42357 657 aa13.33□□□□□ -0.28
SSBP1-206ENST00000467681 PLTPP55058 493 aa13.33□□□□□ -0.28
SSBP1-206ENST00000467681 ADARP55265 1226 aaKnown RBP13.33□□□□□ -0.28
SSBP1-206ENST00000467681 PLOD1Q02809 727 aaPredicted RBP13.33□□□□□ -0.28
SSBP1-206ENST00000467681 CAV1Q03135 178 aa13.33□□□□□ -0.28
SSBP1-206ENST00000467681 PDIA2Q13087 525 aaKnown RBP13.33□□□□□ -0.28
SSBP1-206ENST00000467681 TARDBPQ13148 414 aaKnown RBP eCLIP13.33□□□□□ -0.28
SSBP1-206ENST00000467681 CRYMQ14894 314 aa13.33□□□□□ -0.28
SSBP1-206ENST00000467681 RNF187Q5TA31 235 aaPredicted RBP13.33□□□□□ -0.28
SSBP1-206ENST00000467681 ZNF449Q6P9G9 518 aa13.33□□□□□ -0.28
SSBP1-206ENST00000467681 UNC5AQ6ZN44 842 aa13.33□□□□□ -0.28
SSBP1-206ENST00000467681 RBM44Q6ZP01 1051 aaKnown RBP13.33□□□□□ -0.28
SSBP1-206ENST00000467681 TMEM26Q6ZUK4 368 aa13.33□□□□□ -0.28
SSBP1-206ENST00000467681 USP53Q70EK8 1073 aa13.33□□□□□ -0.28
SSBP1-206ENST00000467681 LMNTD2Q8IXW0 634 aa13.33□□□□□ -0.28
SSBP1-206ENST00000467681 CEP112Q8N8E3 955 aa13.33□□□□□ -0.28
SSBP1-206ENST00000467681 NOA1Q8NC60 698 aaKnown RBP13.33□□□□□ -0.28
SSBP1-206ENST00000467681 CALML6Q8TD86 181 aa13.33□□□□□ -0.28
SSBP1-206ENST00000467681 SEC14L1Q92503 715 aa13.33□□□□□ -0.28
SSBP1-206ENST00000467681 LPGAT1Q92604 370 aa13.33□□□□□ -0.28
SSBP1-206ENST00000467681 BIRC8Q96P09 236 aa13.33□□□□□ -0.28
SSBP1-206ENST00000467681 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.33□□□□□ -0.28
SSBP1-206ENST00000467681 WWP1Q9H0M0 922 aa13.33□□□□□ -0.28
SSBP1-206ENST00000467681 STN1Q9H668 368 aaKnown RBP13.33□□□□□ -0.28
SSBP1-206ENST00000467681 COG4Q9H9E3 785 aa13.33□□□□□ -0.28
SSBP1-206ENST00000467681 SLC40A1Q9NP59 571 aa13.33□□□□□ -0.28
SSBP1-206ENST00000467681 KCNK4Q9NYG8 393 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms