RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 PCCBP05166 539 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 ITGB6P18564 788 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 LEPRP48357 1165 aaKnown RBP10.19□□□□□ -0.78
USP39-210ENST00000459775 RXRGP48443 463 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 B4GALNT1Q00973 533 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 CACNG1Q06432 222 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 WSCD2Q2TBF2 565 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 TNFAIP8L3Q5GJ75 292 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 THOC7Q6I9Y2 204 aaKnown RBP10.19□□□□□ -0.78
USP39-210ENST00000459775 MRNIPQ6NTE8 343 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 TDRPQ86YL5 185 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 SYNPOQ8N3V7 929 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 MDM1Q8TC05 714 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 LPGAT1Q92604 370 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 PEX13Q92968 403 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 PGM2Q96G03 612 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 ELMO2Q96JJ3 720 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 C6orf106Q9H6K1 298 aaPredicted RBP10.19□□□□□ -0.78
USP39-210ENST00000459775 EBF2Q9HAK2 575 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 MLXIPLQ9NP71 852 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 POLMQ9NP87 494 aaPredicted RBP10.19□□□□□ -0.78
USP39-210ENST00000459775 ZNF358Q9NW07 568 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 CRLS1Q9UJA2 301 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 TSR3Q9UJK0 312 aaKnown RBP10.19□□□□□ -0.78
USP39-210ENST00000459775 SLCO1B1Q9Y6L6 691 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 WDR87Q6ZQQ6 2873 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 ZDBF2Q9HCK1 2354 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 PRR5-ARHGAP8B1AHC4 643 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 HNRNPCL2B2RXH8 293 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 SCAMP1O15126 338 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 HNRNPCL1O60812 293 aaKnown RBP10.19□□□□□ -0.78
USP39-210ENST00000459775 SNRPAP09012 282 aaKnown RBP10.19□□□□□ -0.78
USP39-210ENST00000459775 KRT4P19013 534 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 LIMK2P53671 638 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 CLDN2P57739 230 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 TAS2R39P59534 338 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 ARHGAP8P85298 464 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 IRF9Q00978 393 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 TIAL1Q01085 375 aaKnown RBP eCLIP10.19□□□□□ -0.78
USP39-210ENST00000459775 TYSND1Q2T9J0 566 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 HSF5Q4G112 596 aaPredicted RBP10.19□□□□□ -0.78
USP39-210ENST00000459775 GRTP1Q5TC63 336 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 C1orf122Q6ZSJ8 110 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 TAOK1Q7L7X3 1001 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 SNX20Q7Z614 316 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 TRABD2AQ86V40 505 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 KIAA2013Q8IYS2 634 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 GPR150Q8NGU9 434 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 GDAP1Q8TB36 358 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 LKAAEAR1Q8TD35 194 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 RAB7BQ96AH8 199 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 TLCD1Q96CP7 247 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 NUS1Q96E22 293 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 TOE1Q96GM8 510 aaKnown RBP10.19□□□□□ -0.78
USP39-210ENST00000459775 BIRC8Q96P09 236 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 SLC30A3Q99726 388 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 LGR4Q9BXB1 951 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 SLC13A1Q9BZW2 595 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 ITM2CQ9NQX7 267 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 FAM53CQ9NYF3 392 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 DLGAP2Q9P1A6 1054 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 CNOT6Q9ULM6 557 aaKnown RBP10.19□□□□□ -0.78
USP39-210ENST00000459775 MED16Q9Y2X0 877 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 OR1A2Q9Y585 309 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 PCYT1BQ9Y5K3 369 aaPredicted RBP10.19□□□□□ -0.78
USP39-210ENST00000459775 DOCK9Q9BZ29 2069 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 ARPC4-TTLL3A0A0A6YYG9 625 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 FAM95CA0A1B0GW59 222 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 H0Y8X5 98 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 NIPSNAP2O75323 286 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 NDUFS3O75489 264 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 TM7SF2O76062 418 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 MT-ND3P03897 115 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 ITGALP20701 1170 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 ATP1A2P50993 1020 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 GPS2Q13227 327 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 USP10Q14694 798 aaKnown RBP10.18□□□□□ -0.78
USP39-210ENST00000459775 ZNF284Q2VY69 593 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 CTSL3PQ5NE16 218 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 GPRC6AQ5T6X5 926 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 RAET1GQ6H3X3 334 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 CDHR3Q6ZTQ4 885 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 SH2D5Q6ZV89 423 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 NXPE1Q8N323 547 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 BEND7Q8N7W2 519 aaPredicted RBP10.18□□□□□ -0.78
USP39-210ENST00000459775 CALML6Q8TD86 181 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 FAM131CQ96AQ9 280 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 SGF29Q96ES7 293 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 SRPK1Q96SB4 655 aaKnown RBP10.18□□□□□ -0.78
USP39-210ENST00000459775 GPR174Q9BXC1 333 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 RHOJQ9H4E5 214 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 PCMTD2Q9NV79 361 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 FAM8A1Q9UBU6 413 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 FETUBQ9UGM5 382 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 ZNF180Q9UJW8 692 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 APPL1Q9UKG1 709 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 NCKAP1Q9Y2A7 1128 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 TIMM22Q9Y584 194 aa10.18□□□□□ -0.78
USP39-210ENST00000459775 OAS3Q9Y6K5 1087 aaKnown RBP10.18□□□□□ -0.78
USP39-210ENST00000459775 DMDP11532 3685 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms