RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 FAM189BP81408 668 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 GLO1Q04760 184 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 CDK18Q07002 472 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 DPTQ07507 201 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.37□□□□□ -1.55
VPS41-209ENST00000457055 IL18Q14116 193 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 GRM7Q14831 915 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 RPS6KA1Q15418 735 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 BAK1Q16611 211 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 SMN1Q16637 294 aaKnown RBP5.37□□□□□ -1.55
VPS41-209ENST00000457055 WHAMMP3Q1A5X7 153 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 NKAIN1Q4KMZ8 207 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 TMEM119Q4V9L6 283 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 ATG16L1Q676U5 607 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 KLHL17Q6TDP4 642 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 BBS12Q6ZW61 710 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 HTR3DQ70Z44 454 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 DCXRQ7Z4W1 244 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 NEK8Q86SG6 692 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 BIVMQ86UB2 503 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 NUDT13Q86X67 352 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 CLVS1Q8IUQ0 354 aaPredicted RBP5.37□□□□□ -1.55
VPS41-209ENST00000457055 MB21D2Q8IYB1 491 aaPredicted RBP5.37□□□□□ -1.55
VPS41-209ENST00000457055 C16orf71Q8IYS4 520 aaPredicted RBP5.37□□□□□ -1.55
VPS41-209ENST00000457055 GPR135Q8IZ08 494 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 CISD2Q8N5K1 135 aaKnown RBP5.37□□□□□ -1.55
VPS41-209ENST00000457055 ANKRD13CQ8N6S4 541 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 SNX31Q8N9S9 440 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 MINDY2Q8NBR6 621 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 SRFBP1Q8NEF9 429 aaKnown RBP5.37□□□□□ -1.55
VPS41-209ENST00000457055 OR7G1Q8NGA0 311 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 ANGPTL6Q8NI99 470 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 CPT1CQ8TCG5 803 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 LKAAEAR1Q8TD35 194 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 ACTRT2Q8TDY3 377 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 SSH1Q8WYL5 1049 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 SLC25A36Q96CQ1 311 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 REXO5Q96IC2 774 aaKnown RBP5.37□□□□□ -1.55
VPS41-209ENST00000457055 EGLN2Q96KS0 407 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 GCNAQ96QF7 691 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 ABHD1Q96SE0 405 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 LBHD1Q9BQE6 289 aaPredicted RBP5.37□□□□□ -1.55
VPS41-209ENST00000457055 TRIM15Q9C019 465 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 BLZF1Q9H2G9 400 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 NELFAQ9H3P2 528 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 RNPEPQ9H4A4 650 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 RMND5AQ9H871 391 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 EVA1AQ9H8M9 152 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 SYTL2Q9HCH5 934 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 MAGEE1Q9HCI5 957 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 DMAP1Q9NPF5 467 aaPredicted RBP5.37□□□□□ -1.55
VPS41-209ENST00000457055 KCNH7Q9NS40 1196 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 GJB4Q9NTQ9 266 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 RBM12Q9NTZ6 932 aaKnown RBP5.37□□□□□ -1.55
VPS41-209ENST00000457055 LMBRD1Q9NUN5 540 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 TMEM140Q9NV12 185 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 ARMC1Q9NVT9 282 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 HYPKQ9NX55 129 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 NKIRAS1Q9NYS0 192 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 LCMT1Q9UIC8 334 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 CNOT7Q9UIV1 285 aaKnown RBP5.37□□□□□ -1.55
VPS41-209ENST00000457055 TSPAN16Q9UKR8 245 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 PCDHA7Q9UN72 937 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 PPIL1Q9Y3C6 166 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 HBS1LQ9Y450 684 aaKnown RBP5.37□□□□□ -1.55
VPS41-209ENST00000457055 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.37□□□□□ -1.55
VPS41-209ENST00000457055 PPIP5K1Q6PFW1 1433 aa5.37□□□□□ -1.55
VPS41-209ENST00000457055 A0A0U1RQV5 110 aa5.36□□□□□ -1.55
VPS41-209ENST00000457055 OR6C76A6NM76 312 aa5.36□□□□□ -1.55
VPS41-209ENST00000457055 SCDO00767 359 aa5.36□□□□□ -1.55
VPS41-209ENST00000457055 GPR171O14626 319 aa5.36□□□□□ -1.55
VPS41-209ENST00000457055 PRRG1O14668 218 aa5.36□□□□□ -1.55
VPS41-209ENST00000457055 AIM2O14862 343 aa5.36□□□□□ -1.55
VPS41-209ENST00000457055 DENRO43583 198 aaKnown RBP5.36□□□□□ -1.55
VPS41-209ENST00000457055 TADA2AO75478 443 aa5.36□□□□□ -1.55
VPS41-209ENST00000457055 RPS6KA5O75582 802 aa5.36□□□□□ -1.55
VPS41-209ENST00000457055 SERPINI2O75830 405 aa5.36□□□□□ -1.55
VPS41-209ENST00000457055 CCNB2O95067 398 aa5.36□□□□□ -1.55
VPS41-209ENST00000457055 RASAL1O95294 804 aa5.36□□□□□ -1.55
VPS41-209ENST00000457055 SNAPINO95295 136 aa5.36□□□□□ -1.55
VPS41-209ENST00000457055 TGM6O95932 706 aa5.36□□□□□ -1.55
VPS41-209ENST00000457055 CRYGCP07315 174 aa5.36□□□□□ -1.55
VPS41-209ENST00000457055 ADH4P08319 380 aa5.36□□□□□ -1.55
VPS41-209ENST00000457055 CHRNB1P11230 501 aa5.36□□□□□ -1.55
VPS41-209ENST00000457055 CYP2C9P11712 490 aa5.36□□□□□ -1.55
VPS41-209ENST00000457055 MLNP12872 115 aa5.36□□□□□ -1.55
VPS41-209ENST00000457055 ITGA2P17301 1181 aa5.36□□□□□ -1.55
VPS41-209ENST00000457055 YWHAQP27348 245 aa5.36□□□□□ -1.55
VPS41-209ENST00000457055 CCND2P30279 289 aa5.36□□□□□ -1.55
VPS41-209ENST00000457055 IFNA8P32881 189 aa5.36□□□□□ -1.55
VPS41-209ENST00000457055 BMPR1AP36894 532 aa5.36□□□□□ -1.55
VPS41-209ENST00000457055 LEPRP48357 1165 aaKnown RBP5.36□□□□□ -1.55
VPS41-209ENST00000457055 FNTBP49356 437 aa5.36□□□□□ -1.55
VPS41-209ENST00000457055 NPY4RP50391 375 aa5.36□□□□□ -1.55
VPS41-209ENST00000457055 HSD17B4P51659 736 aa5.36□□□□□ -1.55
VPS41-209ENST00000457055 SUCLG1P53597 346 aaKnown RBP5.36□□□□□ -1.55
VPS41-209ENST00000457055 AIF1P55008 147 aa5.36□□□□□ -1.55
VPS41-209ENST00000457055 NME5P56597 212 aa5.36□□□□□ -1.55
VPS41-209ENST00000457055 SELENOVP59797 346 aa5.36□□□□□ -1.55
VPS41-209ENST00000457055 XIAPP98170 497 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms