RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 PRSS48Q7RTY5 328 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 TAC4Q86UU9 113 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 FAM72BQ86X60 149 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 CAMK1DQ8IU85 385 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 HID1Q8IV36 788 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 LIX1LQ8IVB5 337 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 SFRP1Q8N474 314 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 POC5Q8NA72 575 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 ATAD1Q8NBU5 361 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 OR2T3Q8NH03 318 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 RP9Q8TA86 221 aaKnown RBP7.55□□□□□ -1.2
HDAC9-218ENST00000456174 SLC22A8Q8TCC7 542 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 CIDECQ96AQ7 238 aaPredicted RBP7.55□□□□□ -1.2
HDAC9-218ENST00000456174 QKIQ96PU8 341 aaKnown RBP eCLIP7.55□□□□□ -1.2
HDAC9-218ENST00000456174 TKTL2Q9H0I9 626 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 MUC3BQ9H195 1237 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 LRRC40Q9H9A6 602 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 TM9SF3Q9HD45 589 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 FANCFQ9NPI8 374 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 MRPL40Q9NQ50 206 aaKnown RBP7.55□□□□□ -1.2
HDAC9-218ENST00000456174 PRDM8Q9NQV8 689 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 B3GNT2Q9NY97 397 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 FNIP2Q9P278 1114 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 SLCO3A1Q9UIG8 710 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 NUP205Q92621 2012 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 SHROOM3Q8TF72 1996 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 PDZK1P1A8MUH7 402 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 HACD1B0YJ81 288 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 TRIM49D1C9J1S8 452 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 AIM2O14862 343 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 DCXO43602 365 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 MFSD11O43934 449 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 ZNF780AO75290 641 aaPredicted RBP7.55□□□□□ -1.2
HDAC9-218ENST00000456174 TMEM63AO94886 807 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 TRIM16O95361 564 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 IFNA16P05015 189 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 CPB1P15086 417 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 NCF2P19878 526 aaPredicted RBP7.55□□□□□ -1.2
HDAC9-218ENST00000456174 TCN1P20061 433 aaPredicted RBP7.55□□□□□ -1.2
HDAC9-218ENST00000456174 CRHR1P34998 444 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 TRIM23P36406 574 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 CAPGP40121 348 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 GP5P40197 560 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 DPP6P42658 865 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 PGFP49763 221 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 SERPINH1P50454 418 aaKnown RBP7.55□□□□□ -1.2
HDAC9-218ENST00000456174 ST13P50502 369 aaKnown RBP7.55□□□□□ -1.2
HDAC9-218ENST00000456174 PKNOX1P55347 436 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 TPI1P60174 286 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 CBLBQ13191 982 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 SEMA3BQ13214 749 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 MSS51Q4VC12 460 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 PAGE2BQ5JRK9 111 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 RTP2Q5QGT7 225 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 FNBP1LQ5T0N5 605 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 C6orf132Q5T0Z8 1188 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 HEATR6Q6AI08 1181 aaKnown RBP7.55□□□□□ -1.2
HDAC9-218ENST00000456174 ERMP1Q7Z2K6 904 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 HDDC2Q7Z4H3 204 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 SCD5Q86SK9 330 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 NOXA1Q86UR1 476 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 TMEM173Q86WV6 379 aaPredicted RBP7.55□□□□□ -1.2
HDAC9-218ENST00000456174 TBC1D21Q8IYX1 336 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 SVOPQ8N4V2 548 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 FBXO36Q8NEA4 188 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 PJA1Q8NG27 643 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 GTF2H4Q92759 462 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 SNAPC3Q92966 411 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 CCDC120Q96HB5 630 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 DACH2Q96NX9 599 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 LENG8Q96PV6 779 aaPredicted RBP7.55□□□□□ -1.2
HDAC9-218ENST00000456174 SORT1Q99523 831 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 FUNDC2Q9BWH2 189 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.55□□□□□ -1.2
HDAC9-218ENST00000456174 WDR41Q9HAD4 459 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 ZNF556Q9HAH1 456 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 RAB6BQ9NRW1 208 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 TMEM39AQ9NV64 488 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 PAK1IP1Q9NWT1 392 aaPredicted RBP7.55□□□□□ -1.2
HDAC9-218ENST00000456174 GLTPQ9NZD2 209 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 FBXO5Q9UKT4 447 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 TBX21Q9UL17 535 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 GRIP1Q9Y3R0 1128 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 PMF1-BGLAPU3KQ54 211 aa7.55□□□□□ -1.2
HDAC9-218ENST00000456174 MYO18AQ92614 2054 aaKnown RBP7.54□□□□□ -1.2
HDAC9-218ENST00000456174 LTBP2Q14767 1821 aa7.54□□□□□ -1.2
HDAC9-218ENST00000456174 A0A1W2PQH9 124 aa7.54□□□□□ -1.2
HDAC9-218ENST00000456174 H7C4K7 107 aa7.54□□□□□ -1.2
HDAC9-218ENST00000456174 DCLK1O15075 740 aa7.54□□□□□ -1.2
HDAC9-218ENST00000456174 CHADO15335 359 aa7.54□□□□□ -1.2
HDAC9-218ENST00000456174 SYNCRIPO60506 623 aaKnown RBP7.54□□□□□ -1.2
HDAC9-218ENST00000456174 RFPL1O75677 317 aa7.54□□□□□ -1.2
HDAC9-218ENST00000456174 PIAS1O75925 651 aa7.54□□□□□ -1.2
HDAC9-218ENST00000456174 GABARAPO95166 117 aa7.54□□□□□ -1.2
HDAC9-218ENST00000456174 TOP3BO95985 862 aaKnown RBP7.54□□□□□ -1.2
HDAC9-218ENST00000456174 IGLV3-25P01717 112 aa7.54□□□□□ -1.2
HDAC9-218ENST00000456174 PDGFAP04085 211 aa7.54□□□□□ -1.2
HDAC9-218ENST00000456174 RETP07949 1114 aa7.54□□□□□ -1.2
HDAC9-218ENST00000456174 FGF3P11487 239 aaPredicted RBP7.54□□□□□ -1.2
HDAC9-218ENST00000456174 CKMT2P17540 419 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms