RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 SEMA3AQ14563 771 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 ZNF829Q3KNS6 432 aaPredicted RBP11.49□□□□□ -0.57
HCFC1-203ENST00000444191 TRIM60Q495X7 471 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 C6orf183Q5T699 404 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 ATXN7L2Q5T6C5 722 aaPredicted RBP11.49□□□□□ -0.57
HCFC1-203ENST00000444191 ANKFN1Q8N957 763 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 PTCD2Q8WV60 388 aaKnown RBP11.49□□□□□ -0.57
HCFC1-203ENST00000444191 SELENOMQ8WWX9 145 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 ASB2Q96Q27 587 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 CORO1BQ9BR76 489 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 LRRC3Q9BY71 257 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 SERPINA1P01009 418 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 FGF1P05230 155 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 CHRM5P08912 532 aaPredicted RBP11.49□□□□□ -0.57
HCFC1-203ENST00000444191 ALPIP09923 528 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 RPL17P18621 184 aaKnown RBP11.49□□□□□ -0.57
HCFC1-203ENST00000444191 TPTEP56180 551 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 CCDC85BQ15834 202 aaPredicted RBP11.49□□□□□ -0.57
HCFC1-203ENST00000444191 MS4A13Q5J8X5 152 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 TMEM53Q6P2H8 277 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 BLOC1S3Q6QNY0 202 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 EFL1Q7Z2Z2 1120 aaKnown RBP11.49□□□□□ -0.57
HCFC1-203ENST00000444191 LIX1Q8N485 282 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 CGREF1Q99674 301 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 ACBD6Q9BR61 282 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 CIPCQ9C0C6 399 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 MFSD1Q9H3U5 465 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 TUBB1Q9H4B7 451 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 ARL15Q9NXU5 204 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 C3orf18Q9UK00 162 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 ZNF490Q9ULM2 529 aaPredicted RBP11.49□□□□□ -0.57
HCFC1-203ENST00000444191 TBC1D30Q9Y2I9 924 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 PCDHB5Q9Y5E4 795 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 AP1G1O43747 822 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 MITFO75030 526 aaPredicted RBP11.49□□□□□ -0.57
HCFC1-203ENST00000444191 MFN2O95140 757 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 UROSP10746 265 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 LPOP22079 712 aaPredicted RBP11.49□□□□□ -0.57
HCFC1-203ENST00000444191 PAX3P23760 479 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 SHMT2P34897 504 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 SCAPQ12770 1279 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 PSAPL1Q6NUJ1 521 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 MBOAT1Q6ZNC8 495 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 LYSMD3Q7Z3D4 306 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 NECAB2Q7Z6G3 386 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 TMEM126BQ8IUX1 230 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 PELI3Q8N2H9 469 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 DTWD1Q8N5C7 304 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 NKAPQ8N5F7 415 aaKnown RBP11.49□□□□□ -0.57
HCFC1-203ENST00000444191 NT5C3BQ969T7 300 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 FEM1CQ96JP0 617 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 APOLD1Q96LR9 279 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 MYRFLQ96LU7 910 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 SMAD5Q99717 465 aaKnown RBP11.49□□□□□ -0.57
HCFC1-203ENST00000444191 EBPLQ9BY08 206 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 RBM38Q9H0Z9 239 aaKnown RBP11.49□□□□□ -0.57
HCFC1-203ENST00000444191 WDR37Q9Y2I8 494 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 PHIPQ8WWQ0 1821 aa11.49□□□□□ -0.57
HCFC1-203ENST00000444191 SYNDIG1LA6NDD5 238 aa11.48□□□□□ -0.57
HCFC1-203ENST00000444191 BMP10O95393 424 aa11.48□□□□□ -0.57
HCFC1-203ENST00000444191 POU2F1P14859 743 aa11.48□□□□□ -0.57
HCFC1-203ENST00000444191 RHOQP17081 205 aa11.48□□□□□ -0.57
HCFC1-203ENST00000444191 HOXD12P35452 270 aa11.48□□□□□ -0.57
HCFC1-203ENST00000444191 PPP3CCP48454 512 aa11.48□□□□□ -0.57
HCFC1-203ENST00000444191 NKX2-5P52952 324 aaPredicted RBP11.48□□□□□ -0.57
HCFC1-203ENST00000444191 CRY1Q16526 586 aa11.48□□□□□ -0.57
HCFC1-203ENST00000444191 PM20D1Q6GTS8 502 aa11.48□□□□□ -0.57
HCFC1-203ENST00000444191 ZNF549Q6P9A3 640 aa11.48□□□□□ -0.57
HCFC1-203ENST00000444191 HID1Q8IV36 788 aa11.48□□□□□ -0.57
HCFC1-203ENST00000444191 FAM86B1Q8N7N1 296 aa11.48□□□□□ -0.57
HCFC1-203ENST00000444191 C2orf69Q8N8R5 385 aa11.48□□□□□ -0.57
HCFC1-203ENST00000444191 OR4F6Q8NGB9 312 aa11.48□□□□□ -0.57
HCFC1-203ENST00000444191 BRSK1Q8TDC3 778 aa11.48□□□□□ -0.57
HCFC1-203ENST00000444191 RSPH1Q8WYR4 309 aa11.48□□□□□ -0.57
HCFC1-203ENST00000444191 IMP4Q96G21 291 aaKnown RBP11.48□□□□□ -0.57
HCFC1-203ENST00000444191 BBS2Q9BXC9 721 aa11.48□□□□□ -0.57
HCFC1-203ENST00000444191 TLR8Q9NR97 1041 aaKnown RBP11.48□□□□□ -0.57
HCFC1-203ENST00000444191 INIPQ9NRY2 104 aa11.48□□□□□ -0.57
HCFC1-203ENST00000444191 AGPAT4Q9NRZ5 378 aa11.48□□□□□ -0.57
HCFC1-203ENST00000444191 TREX1Q9NSU2 369 aa11.48□□□□□ -0.57
HCFC1-203ENST00000444191 ATAD3AQ9NVI7 634 aa11.48□□□□□ -0.57
HCFC1-203ENST00000444191 SH3BP4Q9P0V3 963 aa11.48□□□□□ -0.57
HCFC1-203ENST00000444191 VPS51Q9UID3 782 aa11.48□□□□□ -0.57
HCFC1-203ENST00000444191 AGO1Q9UL18 857 aaKnown RBP11.48□□□□□ -0.57
HCFC1-203ENST00000444191 SAMHD1Q9Y3Z3 626 aaKnown RBP11.48□□□□□ -0.57
HCFC1-203ENST00000444191 RAI2Q9Y5P3 530 aa11.48□□□□□ -0.57
HCFC1-203ENST00000444191 ELOVL7A1L3X0 281 aa11.48□□□□□ -0.57
HCFC1-203ENST00000444191 TARM1B6A8C7 271 aa11.48□□□□□ -0.57
HCFC1-203ENST00000444191 BCKDKO14874 412 aa11.48□□□□□ -0.57
HCFC1-203ENST00000444191 TBX1O43435 398 aa11.48□□□□□ -0.57
HCFC1-203ENST00000444191 NDST3O95803 873 aa11.48□□□□□ -0.57
HCFC1-203ENST00000444191 HLA-DPA1P20036 260 aa11.48□□□□□ -0.57
HCFC1-203ENST00000444191 MYF6P23409 242 aa11.48□□□□□ -0.57
HCFC1-203ENST00000444191 GKP32189 559 aa11.48□□□□□ -0.57
HCFC1-203ENST00000444191 S100A5P33763 92 aa11.48□□□□□ -0.57
HCFC1-203ENST00000444191 GJA5P36382 358 aa11.48□□□□□ -0.57
HCFC1-203ENST00000444191 ACADVLP49748 655 aa11.48□□□□□ -0.57
HCFC1-203ENST00000444191 HUNKP57058 714 aa11.48□□□□□ -0.57
HCFC1-203ENST00000444191 SEMA3BQ13214 749 aa11.48□□□□□ -0.57
HCFC1-203ENST00000444191 COL9A2Q14055 689 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms