RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 GRK7Q8WTQ7 553 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 JPH3Q8WXH2 748 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 CPT1BQ92523 772 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 NAT6Q93015 286 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 ULK4Q96C45 1275 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 MFSD3Q96ES6 412 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 ATXN7L3BQ96GX2 97 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 AHCYL2Q96HN2 611 aaKnown RBP5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 DEPDC7Q96QD5 511 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 COPS8Q99627 209 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 TRIM56Q9BRZ2 755 aaKnown RBP5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 PHACTR1Q9C0D0 580 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 EPB41L5Q9HCM4 733 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 SYBUQ9NX95 663 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 KCNK4Q9NYG8 393 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 BFARQ9NZS9 450 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 ZNF624Q9P2J8 865 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 NFKBIL1Q9UBC1 381 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 ANAPC5Q9UJX4 755 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 WDR37Q9Y2I8 494 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 NEU2Q9Y3R4 380 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 DYRK1BQ9Y463 629 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 ENTPD2Q9Y5L3 495 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 GPC6Q9Y625 555 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 CFAP20Q9Y6A4 193 aaKnown RBP5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 PRSS21Q9Y6M0 314 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 GVINP1Q7Z2Y8 2422 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 ZNF292O60281 2723 aa5.67□□□□□ -1.5
HMGB3P24-201ENST00000433260 RP1P56715 2156 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 PMS2P1A4D2B8 440 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 MGAT4DA6NG13 374 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 OR52A4PA6NMU1 304 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 AGAP14A8MT82 685 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 GPR89AB7ZAQ6 455 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 GOLGA8KD6RF30 607 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 GOLGA8TH3BQL2 631 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 TAF4O00268 1085 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 CES2O00748 559 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 CD3EAPO15446 510 aaKnown RBP5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 OR1I1O60431 355 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 VAPBO95292 243 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 VIPP01282 170 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 F7P08709 466 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 GPR89BP0CG08 455 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 BRAFP15056 766 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 PNLIPP16233 465 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 VCLP18206 1134 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 XRCC1P18887 633 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 TPSB2P20231 275 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 ACRV1P26436 265 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 CD1CP29017 333 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 CLCNKAP51800 687 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 CSE1LP55060 971 aaKnown RBP5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 PRAMEP78395 509 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 DR1Q01658 176 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 HHEXQ03014 270 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 CACNG1Q06432 222 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 LAMB3Q13751 1172 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 SEMA3AQ14563 771 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 KCNJ11Q14654 390 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 TPSAB1Q15661 275 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 DBN1Q16643 649 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 ST3GAL2Q16842 350 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 ISXQ2M1V0 245 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 C3orf38Q5JPI3 329 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 PHF19Q5T6S3 580 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 C16orf46Q6P387 395 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 ZNF574Q6ZN55 896 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 RBM44Q6ZP01 1051 aaKnown RBP5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 NLRP9Q7RTR0 991 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 TMPRSS9Q7Z410 1059 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 SPRED1Q7Z699 444 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 B3GNT8Q7Z7M8 397 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 PIM3Q86V86 326 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 CAND1Q86VP6 1230 aaKnown RBP5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 C17orf82Q86X59 251 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 TRIM48Q8IWZ4 208 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 PIANPQ8IYJ0 282 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 SFRP1Q8N474 314 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 LILRA3Q8N6C8 439 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 OTUD6BQ8N6M0 293 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 DCBLD1Q8N8Z6 715 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 RCBTB1Q8NDN9 531 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 PHC3Q8NDX5 983 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 OR13J1Q8NGT2 312 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 OR4L1Q8NH43 312 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 NCSTNQ92542 709 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 GATA6Q92908 595 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 CXorf40BQ96DE9 158 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 FERD3LQ96RJ6 166 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 RANBP9Q96S59 729 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 KRT12Q99456 494 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 TRIM51Q9BSJ1 452 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 CCM2Q9BSQ5 444 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 TBC1D10AQ9BXI6 508 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 TRIM31Q9BZY9 425 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 ZCCHC2Q9C0B9 1178 aaKnown RBP5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 WWP1Q9H0M0 922 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 SEMA6CQ9H3T2 930 aa5.66□□□□□ -1.5
HMGB3P24-201ENST00000433260 CCDC86Q9H6F5 360 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms