RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 JOSD2Q8TAC2 188 aa9.83□□□□□ -0.84
CLTCL1-202ENST00000427926 NPLOC4Q8TAT6 608 aa9.83□□□□□ -0.84
CLTCL1-202ENST00000427926 NOD2Q9HC29 1040 aa9.83□□□□□ -0.84
CLTCL1-202ENST00000427926 CD248Q9HCU0 757 aa9.83□□□□□ -0.84
CLTCL1-202ENST00000427926 MOCS1Q9NZB8 636 aa9.83□□□□□ -0.84
CLTCL1-202ENST00000427926 CARD8Q9Y2G2 431 aa9.83□□□□□ -0.84
CLTCL1-202ENST00000427926 PADI2Q9Y2J8 665 aa9.83□□□□□ -0.84
CLTCL1-202ENST00000427926 GMPPBQ9Y5P6 360 aa9.83□□□□□ -0.84
CLTCL1-202ENST00000427926 A0A0U1RQF3 1178 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 RIIAD1A6NNX1 92 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 FAM227AF5H4B4 570 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 IPO13O94829 963 aaKnown RBP9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 CD247P20963 164 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 PTPN4P29074 926 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 L1CAMP32004 1257 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 KIR3DL1P43629 444 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 RAB25P57735 213 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 FOXK1P85037 733 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 CHIT1Q13231 466 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 ADGRF1Q5T601 910 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 BROXQ5VW32 411 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 C8orf59Q8N0T1 100 aaPredicted RBP9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 ZSCAN4Q8NAM6 433 aaPredicted RBP9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 AENQ8WTP8 325 aaKnown RBP9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 PSMG2Q969U7 264 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 ANKRD27Q96NW4 1050 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 FTSJ1Q9UET6 329 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 MAP4K5Q9Y4K4 846 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 GRIN2DO15399 1336 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 UBE2QL1A1L167 161 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 SNPHO15079 494 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 MFSD11O43934 449 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 ENTPD5O75356 428 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 SERPINA3P01011 423 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 TYRP14679 529 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 HNRNPLP14866 589 aaKnown RBP eCLIP9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 RASGEF1BQ0VAM2 473 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 TRAF3Q13114 568 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 RFTN1Q14699 578 aaPredicted RBP9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 SLC9B1Q4ZJI4 515 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 LIPMQ5VYY2 423 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 PACS2Q86VP3 889 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 PIK3C3Q8NEB9 887 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 SGCDQ92629 289 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 FAM192AQ9GZU8 254 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 DHX33Q9H6R0 707 aaKnown RBP9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 PCDHGC3Q9UN70 934 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 IRAK3Q9Y616 596 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 LIN7AO14910 233 aaPredicted RBP9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 LRIG2O94898 1065 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 MNDAP41218 407 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 SLC11A1P49279 550 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 HKDC1Q2TB90 917 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 GCNT6Q5T4J0 391 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 BRAT1Q6PJG6 821 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 FOXR2Q6PJQ5 311 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 KLHL17Q6TDP4 642 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 ARHGAP36Q6ZRI8 547 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 XYLT1Q86Y38 959 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 GJD3Q8N144 294 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 OR2L5Q8NG80 312 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 QKIQ96PU8 341 aaKnown RBP eCLIP9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 RIOK2Q9BVS4 552 aaKnown RBP9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 FAM124BQ9H5Z6 455 aaPredicted RBP9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 PDE7BQ9NP56 450 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 OGDHLQ9ULD0 1010 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 CNOT6Q9ULM6 557 aaKnown RBP9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 MED31Q9Y3C7 131 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 SNX4O95219 450 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 CCR8P51685 355 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 CDH13P55290 713 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 PKNOX1P55347 436 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 SRP54P61011 504 aaKnown RBP9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 PTPN20Q4JDL3 420 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 SPANXN2Q5MJ10 180 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 ZFP1Q6P2D0 407 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 SPESP1Q6UW49 350 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 TRIM63Q969Q1 353 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 SUSD3Q96L08 255 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 DSN1Q9H410 356 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 NSUN3Q9H649 340 aaKnown RBP9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 SNX15Q9NRS6 342 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 FKBPLQ9UIM3 349 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 GABRQQ9UN88 632 aa9.82□□□□□ -0.84
CLTCL1-202ENST00000427926 CASZ1Q86V15 1759 aa9.81□□□□□ -0.84
CLTCL1-202ENST00000427926 MATN3O15232 486 aa9.81□□□□□ -0.84
CLTCL1-202ENST00000427926 IFNA6P05013 189 aa9.81□□□□□ -0.84
CLTCL1-202ENST00000427926 SCTRP47872 440 aa9.81□□□□□ -0.84
CLTCL1-202ENST00000427926 CLCNKAP51800 687 aa9.81□□□□□ -0.84
CLTCL1-202ENST00000427926 PPP3R1P63098 170 aa9.81□□□□□ -0.84
CLTCL1-202ENST00000427926 HYAL2Q12891 473 aa9.81□□□□□ -0.84
CLTCL1-202ENST00000427926 SMCO1Q147U7 214 aa9.81□□□□□ -0.84
CLTCL1-202ENST00000427926 SLC26A9Q7LBE3 791 aa9.81□□□□□ -0.84
CLTCL1-202ENST00000427926 GLIS3Q8NEA6 775 aa9.81□□□□□ -0.84
CLTCL1-202ENST00000427926 KCTD13Q8WZ19 329 aa9.81□□□□□ -0.84
CLTCL1-202ENST00000427926 CPXM1Q96SM3 734 aa9.81□□□□□ -0.84
CLTCL1-202ENST00000427926 ZNF142P52746 1687 aaPredicted RBP9.81□□□□□ -0.84
CLTCL1-202ENST00000427926 PNMA8CA0A1B0GUJ8 204 aa9.81□□□□□ -0.84
CLTCL1-202ENST00000427926 SLC22A3O75751 556 aa9.81□□□□□ -0.84
CLTCL1-202ENST00000427926 SYNGR4O95473 234 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms