RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 FAM110AQ9BQ89 295 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 TMEM47Q9BQJ4 181 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 NUP58Q9BVL2 599 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 LRRC2Q9BYS8 371 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 IFIH1Q9BYX4 1025 aaKnown RBP2.67□□□□□ -1.98
VPS41-206ENST00000418457 HIPK2Q9H2X6 1198 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 NDST4Q9H3R1 872 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 SCPEP1Q9HB40 452 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 FBRSL1Q9HCM7 1045 aaKnown RBP2.67□□□□□ -1.98
VPS41-206ENST00000418457 ZCCHC17Q9NP64 241 aaKnown RBP2.67□□□□□ -1.98
VPS41-206ENST00000418457 MKKSQ9NPJ1 570 aaPredicted RBP2.67□□□□□ -1.98
VPS41-206ENST00000418457 LZTFL1Q9NQ48 299 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 AATFQ9NY61 560 aaKnown RBP eCLIP2.67□□□□□ -1.98
VPS41-206ENST00000418457 DONSONQ9NYP3 566 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 EHD2Q9NZN4 543 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 DLGAP2Q9P1A6 1054 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 RNF14Q9UBS8 474 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 ADD3Q9UEY8 706 aaKnown RBP2.67□□□□□ -1.98
VPS41-206ENST00000418457 LCMT1Q9UIC8 334 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 RWDD2AQ9UIY3 292 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 MAN1B1Q9UKM7 699 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 HPCAL4Q9UM19 191 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 PSAT1Q9Y617 370 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 SAR1BQ9Y6B6 198 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 CEPT1Q9Y6K0 416 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 STON1Q9Y6Q2 735 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 PIAS3Q9Y6X2 628 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 DOCK2Q92608 1830 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 ARAP2Q8WZ64 1704 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 DISP2A7MBM2 1401 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 CDHR2Q9BYE9 1310 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 UBR2Q8IWV8 1755 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 MYH3P11055 1940 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 PXDNQ92626 1479 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 RTL9Q8NET4 1388 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 TRPM3Q9HCF6 1732 aaPredicted RBP2.66□□□□□ -1.98
VPS41-206ENST00000418457 A0A087WWV3 80 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 IGLV5-52A0A0A0MRZ9 124 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 A0A0U1RQJ8 604 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 GOLGA6L7A0A1B0GV03 622 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 FAM237BA0A1B0GVD1 139 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 hDV102S1A0JD36 115 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 ERICH2A1L162 156 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 CLEC18AA5D8T8 446 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 PGPEP1LA6NFU8 196 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 LRRIQ3A6PVS8 624 aaPredicted RBP2.66□□□□□ -1.98
VPS41-206ENST00000418457 SH2B2O14492 632 aaPredicted RBP2.66□□□□□ -1.98
VPS41-206ENST00000418457 CHUKO15111 745 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 EIF3HO15372 352 aaKnown RBP eCLIP2.66□□□□□ -1.98
VPS41-206ENST00000418457 POLR2DO15514 142 aaKnown RBP2.66□□□□□ -1.98
VPS41-206ENST00000418457 USO1O60763 962 aaKnown RBP2.66□□□□□ -1.98
VPS41-206ENST00000418457 HNRNPCL1O60812 293 aaKnown RBP2.66□□□□□ -1.98
VPS41-206ENST00000418457 HSF2BPO75031 334 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 RNASEH2AO75792 299 aaKnown RBP2.66□□□□□ -1.98
VPS41-206ENST00000418457 NKX2-2O95096 273 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 DEXIO95424 95 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 MMP1P03956 469 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 GYPCP04921 128 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 EIF2S1P05198 315 aaKnown RBP2.66□□□□□ -1.98
VPS41-206ENST00000418457 RHOXF2BP0C7M4 288 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 CCDC172P0C7W6 258 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 CALM1P0DP23 149 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 CALM2P0DP24 149 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 CALM3P0DP25 149 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 G6PDP11413 515 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 FCGR1AP12314 374 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 IL7RP16871 459 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 ZNF182P17025 639 aaPredicted RBP2.66□□□□□ -1.98
VPS41-206ENST00000418457 DDX5P17844 614 aaKnown RBP2.66□□□□□ -1.98
VPS41-206ENST00000418457 TCP1P17987 556 aaKnown RBP2.66□□□□□ -1.98
VPS41-206ENST00000418457 CAPN3P20807 821 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 ITGB8P26012 769 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 MARCKSP29966 332 aaPredicted RBP2.66□□□□□ -1.98
VPS41-206ENST00000418457 CASP14P31944 242 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 STX2P32856 288 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 RDXP35241 583 aaKnown RBP2.66□□□□□ -1.98
VPS41-206ENST00000418457 MAP2K2P36507 400 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 RXRGP48443 463 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 COMPP49747 757 aaPredicted RBP2.66□□□□□ -1.98
VPS41-206ENST00000418457 MNAT1P51948 309 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 RAD23BP54727 409 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 F2RL1P55085 397 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 KRTAP10-11P60412 298 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 BNC1Q01954 994 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 AKAP17AQ02040 695 aaKnown RBP2.66□□□□□ -1.98
VPS41-206ENST00000418457 IFFO1Q0D2I5 559 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 AIMP1Q12904 312 aaKnown RBP2.66□□□□□ -1.98
VPS41-206ENST00000418457 TRAF3Q13114 568 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 MAMLD1Q13495 774 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 ERV3-1Q14264 604 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 SLMAPQ14BN4 828 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 MED22Q15528 200 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 ALX1Q15699 326 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 EFNB3Q15768 340 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 SLC45A4Q5BKX6 768 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 SNX30Q5VWJ9 437 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 PLEKHA7Q6IQ23 1121 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 TTI2Q6NXR4 508 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 ANKRD54Q6NXT1 300 aa2.66□□□□□ -1.98
VPS41-206ENST00000418457 METTL2BQ6P1Q9 378 aaKnown RBP2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms