RNA–Protein interactions for RNA: ENST00000416671.5

CHEK2-210, Transcript of checkpoint kinase 2, humanhuman

TSL 1 (best)

Gene CHEK2, Length 2,560 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-210ENST00000416671 ZNF99A8MXY4 864 aaPredicted RBP13.66□□□□□ -0.22
CHEK2-210ENST00000416671 SNPHO15079 494 aa13.66□□□□□ -0.22
CHEK2-210ENST00000416671 MATN3O15232 486 aa13.66□□□□□ -0.22
CHEK2-210ENST00000416671 LTA4HP09960 611 aaKnown RBP13.66□□□□□ -0.22
CHEK2-210ENST00000416671 GPNMBQ14956 572 aa13.66□□□□□ -0.22
CHEK2-210ENST00000416671 CRY1Q16526 586 aa13.66□□□□□ -0.22
CHEK2-210ENST00000416671 LRIT3Q3SXY7 679 aa13.66□□□□□ -0.22
CHEK2-210ENST00000416671 FAM171A1Q5VUB5 890 aa13.66□□□□□ -0.22
CHEK2-210ENST00000416671 CIR1Q86X95 450 aaPredicted RBP13.66□□□□□ -0.22
CHEK2-210ENST00000416671 NODALQ96S42 347 aa13.66□□□□□ -0.22
CHEK2-210ENST00000416671 FSD1LQ9BXM9 530 aa13.66□□□□□ -0.22
CHEK2-210ENST00000416671 GPR62Q9BZJ7 368 aa13.66□□□□□ -0.22
CHEK2-210ENST00000416671 NECTIN3Q9NQS3 549 aa13.66□□□□□ -0.22
CHEK2-210ENST00000416671 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.66□□□□□ -0.22
CHEK2-210ENST00000416671 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.66□□□□□ -0.22
CHEK2-210ENST00000416671 PATJQ8NI35 1801 aa13.66□□□□□ -0.22
CHEK2-210ENST00000416671 VWA8A3KMH1 1905 aa13.66□□□□□ -0.22
CHEK2-210ENST00000416671 J3KR12 359 aa13.66□□□□□ -0.22
CHEK2-210ENST00000416671 GSNP06396 782 aa13.66□□□□□ -0.22
CHEK2-210ENST00000416671 CCL5P13501 91 aa13.66□□□□□ -0.22
CHEK2-210ENST00000416671 TCF3P15923 654 aa13.66□□□□□ -0.22
CHEK2-210ENST00000416671 PCMT1P22061 227 aa13.66□□□□□ -0.22
CHEK2-210ENST00000416671 CD40LGP29965 261 aa13.66□□□□□ -0.22
CHEK2-210ENST00000416671 CYP2C18P33260 490 aa13.66□□□□□ -0.22
CHEK2-210ENST00000416671 BMPR1AP36894 532 aa13.66□□□□□ -0.22
CHEK2-210ENST00000416671 ZNF135P52742 658 aaPredicted RBP13.66□□□□□ -0.22
CHEK2-210ENST00000416671 TOP3AQ13472 1001 aaPredicted RBP13.66□□□□□ -0.22
CHEK2-210ENST00000416671 GRB7Q14451 532 aa13.66□□□□□ -0.22
CHEK2-210ENST00000416671 GEN1Q17RS7 908 aa13.66□□□□□ -0.22
CHEK2-210ENST00000416671 TCTN1Q2MV58 587 aa13.66□□□□□ -0.22
CHEK2-210ENST00000416671 ADPRMQ3LIE5 342 aa13.66□□□□□ -0.22
CHEK2-210ENST00000416671 CTXN3Q4LDR2 81 aa13.66□□□□□ -0.22
CHEK2-210ENST00000416671 ALFQ53S48 1182 aa13.66□□□□□ -0.22
CHEK2-210ENST00000416671 DENND5AQ6IQ26 1287 aa13.66□□□□□ -0.22
CHEK2-210ENST00000416671 LACC1Q8IV20 430 aa13.66□□□□□ -0.22
CHEK2-210ENST00000416671 ZNF555Q8NEP9 628 aa13.66□□□□□ -0.22
CHEK2-210ENST00000416671 PSMA8Q8TAA3 256 aa13.66□□□□□ -0.22
CHEK2-210ENST00000416671 HTRA1Q92743 480 aa13.66□□□□□ -0.22
CHEK2-210ENST00000416671 DACH2Q96NX9 599 aa13.66□□□□□ -0.22
CHEK2-210ENST00000416671 CCDC90BQ9GZT6 254 aa13.66□□□□□ -0.22
CHEK2-210ENST00000416671 FAM118AQ9NWS6 357 aa13.66□□□□□ -0.22
CHEK2-210ENST00000416671 AAR2Q9Y312 384 aaKnown RBP13.66□□□□□ -0.22
CHEK2-210ENST00000416671 OAS3Q9Y6K5 1087 aaKnown RBP13.66□□□□□ -0.22
CHEK2-210ENST00000416671 PTGES3LE9PB15 166 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 M0QX08 132 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 UPK1AO00322 258 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 AXIN1O15169 862 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 NBNO60934 754 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 OAZ2O95190 189 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 HOXC13P31276 330 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 PPP5CP53041 499 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 EEFSECP57772 596 aaKnown RBP13.65□□□□□ -0.22
CHEK2-210ENST00000416671 SLC13A2Q13183 592 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 TMEM236Q5W0B7 351 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 ZNF470Q6ECI4 717 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 BLOC1S3Q6QNY0 202 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 PROSER1Q86XN7 944 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 RIMKLAQ8IXN7 391 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 RTL3Q8N8U3 475 aaKnown RBP13.65□□□□□ -0.22
CHEK2-210ENST00000416671 OR13J1Q8NGT2 312 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 GABPB2Q8TAK5 448 aaPredicted RBP13.65□□□□□ -0.22
CHEK2-210ENST00000416671 PHF10Q8WUB8 498 aaKnown RBP13.65□□□□□ -0.22
CHEK2-210ENST00000416671 RDH12Q96NR8 316 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 SERPINB11Q96P15 392 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 TSGA13Q96PP4 275 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 FCRL5Q96RD9 977 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 YME1L1Q96TA2 773 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 TRIM62Q9BVG3 475 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 CEP44Q9C0F1 390 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 CRISPLD1Q9H336 500 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 PAK6Q9NQU5 681 aaPredicted RBP13.65□□□□□ -0.22
CHEK2-210ENST00000416671 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.65□□□□□ -0.22
CHEK2-210ENST00000416671 TESMINQ9Y4I5 508 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 DNAJC15Q9Y5T4 150 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 MAGED1Q9Y5V3 778 aaPredicted RBP13.65□□□□□ -0.22
CHEK2-210ENST00000416671 A6NL46 340 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 FGF10O15520 208 aaPredicted RBP13.65□□□□□ -0.22
CHEK2-210ENST00000416671 CACNG3O60359 315 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 RFPL2O75678 378 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 SEC24AO95486 1093 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 EOMESO95936 686 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 HAPLN1P10915 354 aaPredicted RBP13.65□□□□□ -0.22
CHEK2-210ENST00000416671 CDH1P12830 882 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 MLLT6P55198 1093 aaPredicted RBP13.65□□□□□ -0.22
CHEK2-210ENST00000416671 PRMT2P55345 433 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 LSM3P62310 102 aaKnown RBP13.65□□□□□ -0.22
CHEK2-210ENST00000416671 ITKQ08881 620 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 CTU2Q2VPK5 515 aaKnown RBP13.65□□□□□ -0.22
CHEK2-210ENST00000416671 RBM20Q5T481 1227 aaKnown RBP13.65□□□□□ -0.22
CHEK2-210ENST00000416671 RNF19BQ6ZMZ0 732 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 FAM126BQ8IXS8 530 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 ELMOD1Q8N336 334 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 C2CD4AQ8NCU7 369 aaPredicted RBP13.65□□□□□ -0.22
CHEK2-210ENST00000416671 SDCCAG3Q96C92 435 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 PABPC5Q96DU9 382 aaKnown RBP13.65□□□□□ -0.22
CHEK2-210ENST00000416671 SCLYQ96I15 445 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 SDR39U1Q9NRG7 319 aaPredicted RBP13.65□□□□□ -0.22
CHEK2-210ENST00000416671 PMF1-BGLAPU3KQ54 211 aa13.65□□□□□ -0.22
CHEK2-210ENST00000416671 ISPDA4D126 451 aa13.64□□□□□ -0.23
CHEK2-210ENST00000416671 GJB3O75712 270 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms