RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 MAP3K13O43283 966 aa9.57□□□□□ -0.88
SMPD4-203ENST00000412570 EDF1O60869 148 aaKnown RBP9.57□□□□□ -0.88
SMPD4-203ENST00000412570 SMIM24O75264 130 aa9.57□□□□□ -0.88
SMPD4-203ENST00000412570 UBOX5O94941 541 aa9.57□□□□□ -0.88
SMPD4-203ENST00000412570 PAPSS2O95340 614 aaPredicted RBP9.57□□□□□ -0.88
SMPD4-203ENST00000412570 SERPIND1P05546 499 aa9.57□□□□□ -0.88
SMPD4-203ENST00000412570 LINC00032P0C843 101 aa9.57□□□□□ -0.88
SMPD4-203ENST00000412570 ATP1B2P14415 290 aaPredicted RBP9.57□□□□□ -0.88
SMPD4-203ENST00000412570 CD1DP15813 335 aa9.57□□□□□ -0.88
SMPD4-203ENST00000412570 CNTFP26441 200 aa9.57□□□□□ -0.88
SMPD4-203ENST00000412570 PTGER3P43115 390 aa9.57□□□□□ -0.88
SMPD4-203ENST00000412570 SMAD4Q13485 552 aaKnown RBP9.57□□□□□ -0.88
SMPD4-203ENST00000412570 EIF4HQ15056 248 aaKnown RBP9.57□□□□□ -0.88
SMPD4-203ENST00000412570 SF1Q15637 639 aaKnown RBP9.57□□□□□ -0.88
SMPD4-203ENST00000412570 CCDC6Q16204 474 aa9.57□□□□□ -0.88
SMPD4-203ENST00000412570 CPSF6Q16630 551 aaKnown RBP eCLIP9.57□□□□□ -0.88
SMPD4-203ENST00000412570 CDKN3Q16667 212 aa9.57□□□□□ -0.88
SMPD4-203ENST00000412570 PPP1R3AQ16821 1122 aa9.57□□□□□ -0.88
SMPD4-203ENST00000412570 CCDC157Q569K6 752 aa9.57□□□□□ -0.88
SMPD4-203ENST00000412570 PIP5KL1Q5T9C9 394 aa9.57□□□□□ -0.88
SMPD4-203ENST00000412570 ATG16L1Q676U5 607 aa9.57□□□□□ -0.88
SMPD4-203ENST00000412570 TEX9Q8N6V9 391 aa9.57□□□□□ -0.88
SMPD4-203ENST00000412570 OR52B6Q8NGF0 335 aa9.57□□□□□ -0.88
SMPD4-203ENST00000412570 GLYATL1Q969I3 302 aa9.57□□□□□ -0.88
SMPD4-203ENST00000412570 ISG20Q96AZ6 181 aaKnown RBP9.57□□□□□ -0.88
SMPD4-203ENST00000412570 ECHDC3Q96DC8 303 aa9.57□□□□□ -0.88
SMPD4-203ENST00000412570 RANBP9Q96S59 729 aa9.57□□□□□ -0.88
SMPD4-203ENST00000412570 C1orf50Q9BV19 199 aa9.57□□□□□ -0.88
SMPD4-203ENST00000412570 CPEB1Q9BZB8 566 aaKnown RBP9.57□□□□□ -0.88
SMPD4-203ENST00000412570 FSCN3Q9NQT6 498 aa9.57□□□□□ -0.88
SMPD4-203ENST00000412570 ARHGEF3Q9NR81 526 aa9.57□□□□□ -0.88
SMPD4-203ENST00000412570 GNPTGQ9UJJ9 305 aa9.57□□□□□ -0.88
SMPD4-203ENST00000412570 HAO1Q9UJM8 370 aa9.57□□□□□ -0.88
SMPD4-203ENST00000412570 KLHL20Q9Y2M5 609 aa9.57□□□□□ -0.88
SMPD4-203ENST00000412570 CFAP99D6REC4 459 aa9.56□□□□□ -0.88
SMPD4-203ENST00000412570 SNX3O60493 162 aa9.56□□□□□ -0.88
SMPD4-203ENST00000412570 POP7O75817 140 aaKnown RBP9.56□□□□□ -0.88
SMPD4-203ENST00000412570 RASGRP1O95267 797 aa9.56□□□□□ -0.88
SMPD4-203ENST00000412570 OR56A5P0C7T3 313 aa9.56□□□□□ -0.88
SMPD4-203ENST00000412570 ZNF8P17098 575 aaPredicted RBP9.56□□□□□ -0.88
SMPD4-203ENST00000412570 NEK2P51955 445 aa9.56□□□□□ -0.88
SMPD4-203ENST00000412570 GAS6Q14393 721 aa9.56□□□□□ -0.88
SMPD4-203ENST00000412570 FAM46CQ5VWP2 391 aa9.56□□□□□ -0.88
SMPD4-203ENST00000412570 UBE2R2Q712K3 238 aaPredicted RBP9.56□□□□□ -0.88
SMPD4-203ENST00000412570 RTL10Q7L3V2 364 aa9.56□□□□□ -0.88
SMPD4-203ENST00000412570 ADCK2Q7Z695 626 aa9.56□□□□□ -0.88
SMPD4-203ENST00000412570 TSTD1Q8NFU3 115 aa9.56□□□□□ -0.88
SMPD4-203ENST00000412570 TUBGCP5Q96RT8 1024 aa9.56□□□□□ -0.88
SMPD4-203ENST00000412570 C1QTNF1Q9BXJ1 281 aa9.56□□□□□ -0.88
SMPD4-203ENST00000412570 KLC4Q9NSK0 619 aa9.56□□□□□ -0.88
SMPD4-203ENST00000412570 SLC23A2Q9UGH3 650 aa9.56□□□□□ -0.88
SMPD4-203ENST00000412570 RGSL1A5PLK6 1076 aa9.56□□□□□ -0.88
SMPD4-203ENST00000412570 ITGB7P26010 798 aa9.56□□□□□ -0.88
SMPD4-203ENST00000412570 TPMTP51580 245 aa9.56□□□□□ -0.88
SMPD4-203ENST00000412570 ABCE1P61221 599 aaKnown RBP9.56□□□□□ -0.88
SMPD4-203ENST00000412570 IRF4Q15306 451 aa9.56□□□□□ -0.88
SMPD4-203ENST00000412570 SLC9B1Q4ZJI4 515 aa9.56□□□□□ -0.88
SMPD4-203ENST00000412570 AGBL4Q5VU57 503 aa9.56□□□□□ -0.88
SMPD4-203ENST00000412570 SYTL1Q8IYJ3 562 aa9.56□□□□□ -0.88
SMPD4-203ENST00000412570 ZNF557Q8N988 423 aaPredicted RBP9.56□□□□□ -0.88
SMPD4-203ENST00000412570 TOE1Q96GM8 510 aaKnown RBP9.56□□□□□ -0.88
SMPD4-203ENST00000412570 PHACTR1Q9C0D0 580 aa9.56□□□□□ -0.88
SMPD4-203ENST00000412570 IL1RL2Q9HB29 575 aa9.56□□□□□ -0.88
SMPD4-203ENST00000412570 ZDHHC3Q9NYG2 299 aa9.56□□□□□ -0.88
SMPD4-203ENST00000412570 FADS3Q9Y5Q0 445 aa9.56□□□□□ -0.88
SMPD4-203ENST00000412570 GIPC1O14908 333 aa9.56□□□□□ -0.88
SMPD4-203ENST00000412570 FDXRP22570 491 aa9.56□□□□□ -0.88
SMPD4-203ENST00000412570 HK3P52790 923 aa9.56□□□□□ -0.88
SMPD4-203ENST00000412570 METTL3Q86U44 580 aaKnown RBP9.56□□□□□ -0.88
SMPD4-203ENST00000412570 PATE1Q8WXA2 126 aa9.56□□□□□ -0.88
SMPD4-203ENST00000412570 OR52B2Q96RD2 323 aa9.56□□□□□ -0.88
SMPD4-203ENST00000412570 CARS2Q9HA77 564 aaKnown RBP9.56□□□□□ -0.88
SMPD4-203ENST00000412570 TMEM51Q9NW97 253 aa9.56□□□□□ -0.88
SMPD4-203ENST00000412570 ZFR2Q9UPR6 939 aaKnown RBP9.56□□□□□ -0.88
SMPD4-203ENST00000412570 ASF1AQ9Y294 204 aa9.56□□□□□ -0.88
SMPD4-203ENST00000412570 ACTL7BQ9Y614 415 aa9.56□□□□□ -0.88
SMPD4-203ENST00000412570 SHOX2O60902 331 aaPredicted RBP9.55□□□□□ -0.88
SMPD4-203ENST00000412570 PEX11AO75192 247 aa9.55□□□□□ -0.88
SMPD4-203ENST00000412570 S100BP04271 92 aaPredicted RBP9.55□□□□□ -0.88
SMPD4-203ENST00000412570 MYF5P13349 255 aa9.55□□□□□ -0.88
SMPD4-203ENST00000412570 MSX2P35548 267 aaPredicted RBP9.55□□□□□ -0.88
SMPD4-203ENST00000412570 PPARGP37231 505 aaPredicted RBP9.55□□□□□ -0.88
SMPD4-203ENST00000412570 NSG1P42857 185 aa9.55□□□□□ -0.88
SMPD4-203ENST00000412570 COPAP53621 1224 aa9.55□□□□□ -0.88
SMPD4-203ENST00000412570 LAMB3Q13751 1172 aa9.55□□□□□ -0.88
SMPD4-203ENST00000412570 GTF2H3Q13889 308 aa9.55□□□□□ -0.88
SMPD4-203ENST00000412570 TTC31Q49AM3 519 aaPredicted RBP9.55□□□□□ -0.88
SMPD4-203ENST00000412570 KIAA0408Q6ZU52 694 aa9.55□□□□□ -0.88
SMPD4-203ENST00000412570 PLD3Q8IV08 490 aa9.55□□□□□ -0.88
SMPD4-203ENST00000412570 FITM2Q8N6M3 262 aa9.55□□□□□ -0.88
SMPD4-203ENST00000412570 RNF148Q8N7C7 305 aa9.55□□□□□ -0.88
SMPD4-203ENST00000412570 HIPK4Q8NE63 616 aa9.55□□□□□ -0.88
SMPD4-203ENST00000412570 GPR78Q96P69 363 aa9.55□□□□□ -0.88
SMPD4-203ENST00000412570 MYLK2Q9H1R3 596 aa9.55□□□□□ -0.88
SMPD4-203ENST00000412570 NOL11Q9H8H0 719 aaKnown RBP9.55□□□□□ -0.88
SMPD4-203ENST00000412570 MRM3Q9HC36 420 aaKnown RBP9.55□□□□□ -0.88
SMPD4-203ENST00000412570 NCKAP1Q9Y2A7 1128 aa9.55□□□□□ -0.88
SMPD4-203ENST00000412570 RRP15Q9Y3B9 282 aaKnown RBP9.55□□□□□ -0.88
SMPD4-203ENST00000412570 MAP1BP46821 2468 aaKnown RBP9.55□□□□□ -0.88
SMPD4-203ENST00000412570 CCDC189A1A4V9 331 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms