RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 HLA-DPA1P20036 260 aa16.13■□□□□ 0.17
SCAMP4-203ENST00000411971 PSMB4P28070 264 aa16.13■□□□□ 0.17
SCAMP4-203ENST00000411971 ARCN1P48444 511 aaKnown RBP16.13■□□□□ 0.17
SCAMP4-203ENST00000411971 RPS18P62269 152 aaKnown RBP16.13■□□□□ 0.17
SCAMP4-203ENST00000411971 MPP3Q13368 585 aa16.13■□□□□ 0.17
SCAMP4-203ENST00000411971 GTF2H3Q13889 308 aa16.13■□□□□ 0.17
SCAMP4-203ENST00000411971 IL11RAQ14626 422 aa16.13■□□□□ 0.17
SCAMP4-203ENST00000411971 ODF2Q5BJF6 829 aa16.13■□□□□ 0.17
SCAMP4-203ENST00000411971 METRNLQ641Q3 311 aa16.13■□□□□ 0.17
SCAMP4-203ENST00000411971 DENND5AQ6IQ26 1287 aa16.13■□□□□ 0.17
SCAMP4-203ENST00000411971 FAM199XQ6PEV8 388 aaPredicted RBP16.13■□□□□ 0.17
SCAMP4-203ENST00000411971 RANBP10Q6VN20 620 aa16.13■□□□□ 0.17
SCAMP4-203ENST00000411971 CNGA4Q8IV77 575 aa16.13■□□□□ 0.17
SCAMP4-203ENST00000411971 CCDC50Q8IVM0 306 aa16.13■□□□□ 0.17
SCAMP4-203ENST00000411971 RCOR2Q8IZ40 523 aa16.13■□□□□ 0.17
SCAMP4-203ENST00000411971 OR4K2Q8NGD2 314 aa16.13■□□□□ 0.17
SCAMP4-203ENST00000411971 OR13C4Q8NGS5 318 aa16.13■□□□□ 0.17
SCAMP4-203ENST00000411971 ZNF398Q8TD17 642 aa16.13■□□□□ 0.17
SCAMP4-203ENST00000411971 BRSK1Q8TDC3 778 aa16.13■□□□□ 0.17
SCAMP4-203ENST00000411971 CT55Q8WUE5 264 aa16.13■□□□□ 0.17
SCAMP4-203ENST00000411971 APOBEC4Q8WW27 367 aaKnown RBP16.13■□□□□ 0.17
SCAMP4-203ENST00000411971 COL26A1Q96A83 441 aa16.13■□□□□ 0.17
SCAMP4-203ENST00000411971 RMDN2Q96LZ7 410 aa16.13■□□□□ 0.17
SCAMP4-203ENST00000411971 SRPK1Q96SB4 655 aaKnown RBP16.13■□□□□ 0.17
SCAMP4-203ENST00000411971 WWP1Q9H0M0 922 aa16.13■□□□□ 0.17
SCAMP4-203ENST00000411971 GBA3Q9H227 469 aa16.13■□□□□ 0.17
SCAMP4-203ENST00000411971 FAM96AQ9H5X1 160 aa16.13■□□□□ 0.17
SCAMP4-203ENST00000411971 IMP3Q9NV31 184 aaKnown RBP16.13■□□□□ 0.17
SCAMP4-203ENST00000411971 SMOXQ9NWM0 555 aa16.13■□□□□ 0.17
SCAMP4-203ENST00000411971 LNPEPQ9UIQ6 1025 aa16.13■□□□□ 0.17
SCAMP4-203ENST00000411971 TP53TG5Q9Y2B4 290 aa16.13■□□□□ 0.17
SCAMP4-203ENST00000411971 REXO2Q9Y3B8 237 aaKnown RBP16.13■□□□□ 0.17
SCAMP4-203ENST00000411971 PRAMEF1O95521 474 aa16.12■□□□□ 0.17
SCAMP4-203ENST00000411971 TPM1P09493 284 aa16.12■□□□□ 0.17
SCAMP4-203ENST00000411971 PRSS56P0CW18 603 aa16.12■□□□□ 0.17
SCAMP4-203ENST00000411971 MTHFD1P11586 935 aaKnown RBP16.12■□□□□ 0.17
SCAMP4-203ENST00000411971 CDKN1CP49918 316 aaPredicted RBP16.12■□□□□ 0.17
SCAMP4-203ENST00000411971 OTUD4Q01804 1114 aaKnown RBP16.12■□□□□ 0.17
SCAMP4-203ENST00000411971 SRSF1Q07955 248 aaKnown RBP eCLIP16.12■□□□□ 0.17
SCAMP4-203ENST00000411971 LAMB3Q13751 1172 aa16.12■□□□□ 0.17
SCAMP4-203ENST00000411971 SPARCL1Q14515 664 aa16.12■□□□□ 0.17
SCAMP4-203ENST00000411971 CRTC2Q53ET0 693 aaPredicted RBP16.12■□□□□ 0.17
SCAMP4-203ENST00000411971 LDLRAP1Q5SW96 308 aa16.12■□□□□ 0.17
SCAMP4-203ENST00000411971 PRAMEF17Q5VTA0 474 aa16.12■□□□□ 0.17
SCAMP4-203ENST00000411971 C11orf63Q6NUN7 778 aa16.12■□□□□ 0.17
SCAMP4-203ENST00000411971 BZW1Q7L1Q6 419 aaKnown RBP16.12■□□□□ 0.17
SCAMP4-203ENST00000411971 ACTL9Q8TC94 416 aa16.12■□□□□ 0.17
SCAMP4-203ENST00000411971 TTC25Q96NG3 672 aa16.12■□□□□ 0.17
SCAMP4-203ENST00000411971 HACD3Q9P035 362 aa16.12■□□□□ 0.17
SCAMP4-203ENST00000411971 UTP20O75691 2785 aaKnown RBP16.11■□□□□ 0.17
SCAMP4-203ENST00000411971 HACD1B0YJ81 288 aa16.11■□□□□ 0.17
SCAMP4-203ENST00000411971 H7C0C1 242 aa16.11■□□□□ 0.17
SCAMP4-203ENST00000411971 APOC4-APOC2K7ER74 178 aa16.11■□□□□ 0.17
SCAMP4-203ENST00000411971 MTSS1O43312 755 aa16.11■□□□□ 0.17
SCAMP4-203ENST00000411971 KATNA1O75449 491 aa16.11■□□□□ 0.17
SCAMP4-203ENST00000411971 DNAJB5O75953 348 aa16.11■□□□□ 0.17
SCAMP4-203ENST00000411971 APOC2P02655 101 aa16.11■□□□□ 0.17
SCAMP4-203ENST00000411971 NTRK1P04629 796 aa16.11■□□□□ 0.17
SCAMP4-203ENST00000411971 VCLP18206 1134 aa16.11■□□□□ 0.17
SCAMP4-203ENST00000411971 ATP5OP48047 213 aa16.11■□□□□ 0.17
SCAMP4-203ENST00000411971 TUBB3Q13509 450 aa16.11■□□□□ 0.17
SCAMP4-203ENST00000411971 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.11■□□□□ 0.17
SCAMP4-203ENST00000411971 FAM69BQ5VUD6 431 aa16.11■□□□□ 0.17
SCAMP4-203ENST00000411971 LCN10Q6JVE6 187 aa16.11■□□□□ 0.17
SCAMP4-203ENST00000411971 PPP1R3BQ86XI6 285 aa16.11■□□□□ 0.17
SCAMP4-203ENST00000411971 RBM12BQ8IXT5 1001 aaKnown RBP16.11■□□□□ 0.17
SCAMP4-203ENST00000411971 SLC38A9Q8NBW4 561 aa16.11■□□□□ 0.17
SCAMP4-203ENST00000411971 CCDC110Q8TBZ0 833 aa16.11■□□□□ 0.17
SCAMP4-203ENST00000411971 ALG3Q92685 438 aa16.11■□□□□ 0.17
SCAMP4-203ENST00000411971 STAMBPL1Q96FJ0 436 aa16.11■□□□□ 0.17
SCAMP4-203ENST00000411971 ZDHHC12Q96GR4 267 aa16.11■□□□□ 0.17
SCAMP4-203ENST00000411971 VAT1Q99536 393 aa16.11■□□□□ 0.17
SCAMP4-203ENST00000411971 EFHD1Q9BUP0 239 aa16.11■□□□□ 0.17
SCAMP4-203ENST00000411971 TRIM55Q9BYV6 548 aa16.11■□□□□ 0.17
SCAMP4-203ENST00000411971 LHX9Q9NQ69 397 aa16.11■□□□□ 0.17
SCAMP4-203ENST00000411971 SEC16AO15027 2179 aa16.11■□□□□ 0.17
SCAMP4-203ENST00000411971 NBPF19A0A087WUL8 3843 aa16.1■□□□□ 0.17
SCAMP4-203ENST00000411971 A0A0U1RQJ8 604 aa16.1■□□□□ 0.17
SCAMP4-203ENST00000411971 OR5K3A6NET4 321 aa16.1■□□□□ 0.17
SCAMP4-203ENST00000411971 SOWAHDA6NJG2 315 aa16.1■□□□□ 0.17
SCAMP4-203ENST00000411971 AGAP14A8MT82 685 aa16.1■□□□□ 0.17
SCAMP4-203ENST00000411971 STX7O15400 261 aaKnown RBP16.1■□□□□ 0.17
SCAMP4-203ENST00000411971 PJA2O43164 708 aa16.1■□□□□ 0.17
SCAMP4-203ENST00000411971 KCNJ13O60928 360 aa16.1■□□□□ 0.17
SCAMP4-203ENST00000411971 SRP72O76094 671 aaKnown RBP16.1■□□□□ 0.17
SCAMP4-203ENST00000411971 LPOP22079 712 aaPredicted RBP16.1■□□□□ 0.17
SCAMP4-203ENST00000411971 CTNNA1P35221 906 aaKnown RBP16.1■□□□□ 0.17
SCAMP4-203ENST00000411971 CASRP41180 1078 aa16.1■□□□□ 0.17
SCAMP4-203ENST00000411971 HALP42357 657 aa16.1■□□□□ 0.17
SCAMP4-203ENST00000411971 KPNA2P52292 529 aaKnown RBP16.1■□□□□ 0.17
SCAMP4-203ENST00000411971 FOXK1P85037 733 aa16.1■□□□□ 0.17
SCAMP4-203ENST00000411971 TMPRSS15P98073 1019 aa16.1■□□□□ 0.17
SCAMP4-203ENST00000411971 XRCC4Q13426 336 aa16.1■□□□□ 0.17
SCAMP4-203ENST00000411971 DNASE1L3Q13609 305 aa16.1■□□□□ 0.17
SCAMP4-203ENST00000411971 GPR19Q15760 415 aa16.1■□□□□ 0.17
SCAMP4-203ENST00000411971 ZNF658BQ4V348 819 aaPredicted RBP16.1■□□□□ 0.17
SCAMP4-203ENST00000411971 ANKRD20A2Q5SQ80 823 aa16.1■□□□□ 0.17
SCAMP4-203ENST00000411971 ANKRD20A1Q5TYW2 823 aa16.1■□□□□ 0.17
SCAMP4-203ENST00000411971 ANKRD20A3Q5VUR7 823 aa16.1■□□□□ 0.17
SCAMP4-203ENST00000411971 SIDT2Q8NBJ9 832 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms