RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 FUBP3Q96I24 572 aaKnown RBP eCLIP10.85□□□□□ -0.67
CACNA1C-216ENST00000399638 ZSWIM3Q96MP5 696 aa10.85□□□□□ -0.67
CACNA1C-216ENST00000399638 MRPL45Q9BRJ2 306 aaKnown RBP10.85□□□□□ -0.67
CACNA1C-216ENST00000399638 SEZ6LQ9BYH1 1024 aa10.85□□□□□ -0.67
CACNA1C-216ENST00000399638 EHD1Q9H4M9 534 aa10.85□□□□□ -0.67
CACNA1C-216ENST00000399638 BLOC1S4Q9NUP1 217 aa10.85□□□□□ -0.67
CACNA1C-216ENST00000399638 ATPIF1Q9UII2 106 aa10.85□□□□□ -0.67
CACNA1C-216ENST00000399638 GPR34Q9UPC5 381 aa10.85□□□□□ -0.67
CACNA1C-216ENST00000399638 COMMD3-BMI1R4GMX3 469 aa10.85□□□□□ -0.67
CACNA1C-216ENST00000399638 REM1O75628 298 aa10.85□□□□□ -0.67
CACNA1C-216ENST00000399638 CSTBP04080 98 aaKnown RBP10.85□□□□□ -0.67
CACNA1C-216ENST00000399638 ATP4AP20648 1035 aa10.85□□□□□ -0.67
CACNA1C-216ENST00000399638 RGS19P49795 217 aa10.85□□□□□ -0.67
CACNA1C-216ENST00000399638 PLP2Q04941 152 aa10.85□□□□□ -0.67
CACNA1C-216ENST00000399638 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.85□□□□□ -0.67
CACNA1C-216ENST00000399638 RFX4Q33E94 735 aa10.85□□□□□ -0.67
CACNA1C-216ENST00000399638 VARS2Q5ST30 1063 aaKnown RBP10.85□□□□□ -0.67
CACNA1C-216ENST00000399638 N4BP2L1Q5TBK1 243 aaPredicted RBP10.85□□□□□ -0.67
CACNA1C-216ENST00000399638 C9orf57Q5W0N0 161 aa10.85□□□□□ -0.67
CACNA1C-216ENST00000399638 ZNF730Q6ZMV8 503 aa10.85□□□□□ -0.67
CACNA1C-216ENST00000399638 TMPPEQ6ZT21 453 aa10.85□□□□□ -0.67
CACNA1C-216ENST00000399638 DCAKDQ8WVC6 231 aa10.85□□□□□ -0.67
CACNA1C-216ENST00000399638 RNF145Q96MT1 663 aa10.85□□□□□ -0.67
CACNA1C-216ENST00000399638 UGT2B28Q9BY64 529 aa10.85□□□□□ -0.67
CACNA1C-216ENST00000399638 SEMA6BQ9H3T3 888 aa10.85□□□□□ -0.67
CACNA1C-216ENST00000399638 ABCB10Q9NRK6 738 aa10.85□□□□□ -0.67
CACNA1C-216ENST00000399638 PHGDHO43175 533 aaKnown RBP10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 MAFO75444 373 aaPredicted RBP10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 LAMP2P13473 410 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 SLC1A6P48664 564 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 CHN2P52757 468 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 SCGB2A2Q13296 93 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 RBM39Q14498 530 aaKnown RBP10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 AAGABQ6PD74 315 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 DNAJB7Q7Z6W7 309 aaPredicted RBP10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 OR52K1Q8NGK4 314 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 ITFG1Q8TB96 612 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 SLC22A17Q8WUG5 538 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 VAT1Q99536 393 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 ACO2Q99798 780 aaKnown RBP10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 HSD3B7Q9H2F3 369 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 CRISPLD1Q9H336 500 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 PPP1R14DQ9NXH3 145 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 NCANO14594 1321 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 M0R036 132 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 SYN3O14994 580 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 FGF18O76093 207 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 GJB6O95452 261 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 LDOC1O95751 146 aaPredicted RBP10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 IFNA6P05013 189 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 TACR2P21452 398 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 GLRA2P23416 452 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 TNFSF9P41273 254 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 PRKCIP41743 596 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 VLDLRP98155 873 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 PSTKQ8IV42 348 aaKnown RBP10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 TOR1AIP2Q8NFQ8 470 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 ACSS2Q9NR19 701 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 GKN1Q9NS71 199 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 TBC1D30Q9Y2I9 924 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 GRIP1Q9Y3R0 1128 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 B4GALT5O43286 388 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 GABBR2O75899 941 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 ASLP04424 464 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 CDKN1CP49918 316 aaPredicted RBP10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 NEK3P51956 506 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 HK2P52789 917 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 AQP5P55064 265 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 SMIM11AP58511 58 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 GALK2Q01415 458 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 TCHHL1Q5QJ38 904 aaPredicted RBP10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 ATPAF1Q5TC12 328 aaPredicted RBP10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 CXorf57Q6NSI4 855 aaKnown RBP10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 NLGN4XQ8N0W4 816 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 PHF10Q8WUB8 498 aaKnown RBP10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 PNPLA2Q96AD5 504 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 EBF3Q9H4W6 596 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 FBRSL1Q9HCM7 1045 aaKnown RBP10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 ABCB9Q9NP78 766 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 CLUHO75153 1309 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 AGPSO00116 658 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 DHX15O43143 795 aaKnown RBP10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 UNC5CO95185 931 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 FESP07332 822 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 SLC34A1Q06495 639 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 NEPROQ6NW34 567 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 TOP6BLQ8N6T0 577 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 OR4L1Q8NH43 312 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 CDT1Q9H211 546 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 FAM198AQ9UFP1 575 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 COL1A2P08123 1366 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 SLIT3O75094 1523 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 PCDHGA12O60330 932 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 CHRNGP07510 517 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 ETS1P14921 441 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 MAGEA11P43364 429 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 SLC12A3P55017 1021 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 CARD16Q5EG05 197 aa10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 INTS6LQ5JSJ4 861 aaKnown RBP10.84□□□□□ -0.67
CACNA1C-216ENST00000399638 ANXA8L1Q5VT79 327 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms