RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 SLC32A1Q9H598 525 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 OLAHQ9NV23 265 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 TTC36A6NLP5 189 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 UBXN8O00124 270 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 PRPS1L1P21108 318 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 HTR1EP28566 365 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 VIPR1P32241 457 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 WASH2PQ6VEQ5 465 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 USP30Q70CQ3 517 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 DENND1CQ8IV53 801 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 ELMO2Q96JJ3 720 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 BCL7BQ9BQE9 202 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 ALG13Q9NP73 1137 aaKnown RBP5.78□□□□□ -1.48
PTPRD-206ENST00000397617 WASH6PQ9NQA3 447 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 OPTCQ9UBM4 332 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 CROTQ9UKG9 612 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 RGS14O43566 566 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 DENRO43583 198 aaKnown RBP5.78□□□□□ -1.48
PTPRD-206ENST00000397617 CSF2RAP15509 400 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 SLC6A2P23975 617 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 TRA2BP62995 288 aaKnown RBP5.78□□□□□ -1.48
PTPRD-206ENST00000397617 SEPT6Q14141 434 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 AP1ARQ63HQ0 302 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 CYHR1Q6ZMK1 362 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 CAPN12Q6ZSI9 719 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 HM13Q8TCT9 377 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 NXNL1Q96CM4 212 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 FCRL1Q96LA6 429 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 RUVBL2Q9Y230 463 aaKnown RBP5.78□□□□□ -1.48
PTPRD-206ENST00000397617 RUVBL1Q9Y265 456 aaKnown RBP5.78□□□□□ -1.48
PTPRD-206ENST00000397617 PCDHGA2Q9Y5H1 932 aa5.78□□□□□ -1.48
PTPRD-206ENST00000397617 TCF20Q9UGU0 1960 aaKnown RBP5.78□□□□□ -1.48
PTPRD-206ENST00000397617 DCXO43602 365 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 RNGTTO60942 597 aaKnown RBP5.77□□□□□ -1.49
PTPRD-206ENST00000397617 POLR2EP19388 210 aaKnown RBP5.77□□□□□ -1.49
PTPRD-206ENST00000397617 ACVRL1P37023 503 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 ABATP80404 500 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 ART3Q13508 389 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 ATG9BQ674R7 924 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 KCTD4Q8WVF5 259 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 GFM2Q969S9 779 aaKnown RBP5.77□□□□□ -1.49
PTPRD-206ENST00000397617 COPG1Q9Y678 874 aaKnown RBP5.77□□□□□ -1.49
PTPRD-206ENST00000397617 TCRBV3S1A0A5B6 114 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 LINC01553A4QN01 128 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 CXCL14O95715 111 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 FADDQ13158 208 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 RPS6KA2Q15349 733 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 LSM12Q3MHD2 195 aaKnown RBP5.77□□□□□ -1.49
PTPRD-206ENST00000397617 NIPAL1Q6NVV3 410 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 ZNF549Q6P9A3 640 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 R3HCC1LQ7Z5L2 792 aaKnown RBP5.77□□□□□ -1.49
PTPRD-206ENST00000397617 CCNYL1Q8N7R7 359 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 ZNF781Q8N8C0 355 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 TERB1Q8NA31 727 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 BPIFB1Q8TDL5 484 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 FRS2Q8WU20 508 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 BTN2A2Q8WVV5 523 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 RAD51AP1Q96B01 352 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 DCUN1D1Q96GG9 259 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 SCYL1Q96KG9 808 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 CCM2Q9BSQ5 444 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 WDR41Q9HAD4 459 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 ELOVL2Q9NXB9 296 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 AHSPQ9NZD4 102 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 IGLON5A6NGN9 336 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 LEFTY2O00292 366 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 TNFRSF10CO14798 259 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 ADAM12O43184 909 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 OR4Q2P0C623 313 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 ACRV1P26436 265 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 UNC50Q53HI1 259 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 ACSBG2Q5FVE4 666 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 C6orf136Q5SQH8 315 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 SPOUT1Q5T280 376 aaKnown RBP5.77□□□□□ -1.49
PTPRD-206ENST00000397617 TLDC1Q6P9B6 456 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 ADAMTSL4Q6UY14 1074 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 ATP6V1E2Q96A05 226 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 C11orf24Q96F05 449 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-206ENST00000397617 CHRNA10Q9GZZ6 450 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 RNF38Q9H0F5 515 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 ASB8Q9H765 288 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 CFAP97Q9P2B7 532 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 FAM8A1Q9UBU6 413 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 CDH22Q9UJ99 828 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 MRPS23Q9Y3D9 190 aaKnown RBP5.77□□□□□ -1.49
PTPRD-206ENST00000397617 GPR45Q9Y5Y3 372 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 FOXE1O00358 373 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-206ENST00000397617 PHGDHO43175 533 aaKnown RBP5.77□□□□□ -1.49
PTPRD-206ENST00000397617 ATG13O75143 517 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 TBX18O95935 607 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 TOP3BO95985 862 aaKnown RBP5.77□□□□□ -1.49
PTPRD-206ENST00000397617 XPAP23025 273 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-206ENST00000397617 PRLHRP49683 370 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 CLDN8P56748 225 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 TMEM52BQ4KMG9 183 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 HID1Q8IV36 788 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 ADGRG2Q8IZP9 1017 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 RAB42Q8N4Z0 105 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 SH3RF2Q8TEC5 729 aa5.77□□□□□ -1.49
PTPRD-206ENST00000397617 OR8D1Q8WZ84 308 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms