RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 CLDN2P57739 230 aa16.67■□□□□ 0.26
TSPAN4-205ENST00000397406 PPARDQ03181 441 aa16.67■□□□□ 0.26
TSPAN4-205ENST00000397406 INSCQ1MX18 579 aa16.67■□□□□ 0.26
TSPAN4-205ENST00000397406 BCL7AQ4VC05 210 aa16.67■□□□□ 0.26
TSPAN4-205ENST00000397406 UGT3A1Q6NUS8 523 aa16.67■□□□□ 0.26
TSPAN4-205ENST00000397406 PAQR3Q6TCH7 311 aa16.67■□□□□ 0.26
TSPAN4-205ENST00000397406 GCNT7Q6ZNI0 430 aa16.67■□□□□ 0.26
TSPAN4-205ENST00000397406 LCA5Q86VQ0 697 aa16.67■□□□□ 0.26
TSPAN4-205ENST00000397406 ARFGAP2Q8N6H7 521 aa16.67■□□□□ 0.26
TSPAN4-205ENST00000397406 TMEM145Q8NBT3 493 aa16.67■□□□□ 0.26
TSPAN4-205ENST00000397406 TCP10LQ8TDR4 215 aa16.67■□□□□ 0.26
TSPAN4-205ENST00000397406 KCTD4Q8WVF5 259 aa16.67■□□□□ 0.26
TSPAN4-205ENST00000397406 PIGKQ92643 395 aa16.67■□□□□ 0.26
TSPAN4-205ENST00000397406 FOXJ1Q92949 421 aa16.67■□□□□ 0.26
TSPAN4-205ENST00000397406 PANX3Q96QZ0 392 aa16.67■□□□□ 0.26
TSPAN4-205ENST00000397406 C12orf65Q9H3J6 166 aaKnown RBP16.67■□□□□ 0.26
TSPAN4-205ENST00000397406 FSCN3Q9NQT6 498 aa16.67■□□□□ 0.26
TSPAN4-205ENST00000397406 ZNF358Q9NW07 568 aa16.67■□□□□ 0.26
TSPAN4-205ENST00000397406 SLC17A7Q9P2U7 560 aa16.67■□□□□ 0.26
TSPAN4-205ENST00000397406 TRMT6Q9UJA5 497 aaKnown RBP16.67■□□□□ 0.26
TSPAN4-205ENST00000397406 DMTF1Q9Y222 760 aa16.67■□□□□ 0.26
TSPAN4-205ENST00000397406 CA5BQ9Y2D0 317 aa16.67■□□□□ 0.26
TSPAN4-205ENST00000397406 ATXN2Q99700 1313 aaKnown RBP16.67■□□□□ 0.26
TSPAN4-205ENST00000397406 RALGAPA1Q6GYQ0 2036 aa16.66■□□□□ 0.26
TSPAN4-205ENST00000397406 CHUKO15111 745 aa16.66■□□□□ 0.26
TSPAN4-205ENST00000397406 FOXD2O60548 495 aaPredicted RBP16.66■□□□□ 0.26
TSPAN4-205ENST00000397406 KLHL2O95198 593 aa16.66■□□□□ 0.26
TSPAN4-205ENST00000397406 ZWINTO95229 277 aa16.66■□□□□ 0.26
TSPAN4-205ENST00000397406 TRIM16O95361 564 aa16.66■□□□□ 0.26
TSPAN4-205ENST00000397406 HOXC4P09017 264 aaPredicted RBP16.66■□□□□ 0.26
TSPAN4-205ENST00000397406 CCDC166P0CW27 439 aa16.66■□□□□ 0.26
TSPAN4-205ENST00000397406 ZNF8P17098 575 aaPredicted RBP16.66■□□□□ 0.26
TSPAN4-205ENST00000397406 ITPKAP23677 461 aa16.66■□□□□ 0.26
TSPAN4-205ENST00000397406 ATP1A2P50993 1020 aa16.66■□□□□ 0.26
TSPAN4-205ENST00000397406 PEAR1Q5VY43 1037 aaPredicted RBP16.66■□□□□ 0.26
TSPAN4-205ENST00000397406 TBC1D1Q86TI0 1168 aaPredicted RBP16.66■□□□□ 0.26
TSPAN4-205ENST00000397406 C11orf74Q86VG3 221 aa16.66■□□□□ 0.26
TSPAN4-205ENST00000397406 CADM4Q8NFZ8 388 aa16.66■□□□□ 0.26
TSPAN4-205ENST00000397406 MDM1Q8TC05 714 aa16.66■□□□□ 0.26
TSPAN4-205ENST00000397406 NXNL1Q96CM4 212 aa16.66■□□□□ 0.26
TSPAN4-205ENST00000397406 SPACA7Q96KW9 195 aa16.66■□□□□ 0.26
TSPAN4-205ENST00000397406 GPR78Q96P69 363 aa16.66■□□□□ 0.26
TSPAN4-205ENST00000397406 CNOT10Q9H9A5 744 aaKnown RBP16.66■□□□□ 0.26
TSPAN4-205ENST00000397406 SYTL2Q9HCH5 934 aa16.66■□□□□ 0.26
TSPAN4-205ENST00000397406 SARS2Q9NP81 518 aaKnown RBP16.66■□□□□ 0.26
TSPAN4-205ENST00000397406 IGSF5Q9NSI5 407 aa16.66■□□□□ 0.26
TSPAN4-205ENST00000397406 SPATS2LQ9NUQ6 558 aaKnown RBP16.66■□□□□ 0.26
TSPAN4-205ENST00000397406 KLHL42Q9P2K6 505 aa16.66■□□□□ 0.26
TSPAN4-205ENST00000397406 EMCNQ9ULC0 261 aa16.66■□□□□ 0.26
TSPAN4-205ENST00000397406 TMEM98Q9Y2Y6 226 aa16.66■□□□□ 0.26
TSPAN4-205ENST00000397406 PLLPQ9Y342 182 aa16.66■□□□□ 0.26
TSPAN4-205ENST00000397406 HS3ST3A1Q9Y663 406 aa16.66■□□□□ 0.26
TSPAN4-205ENST00000397406 THADAQ6YHU6 1953 aa16.66■□□□□ 0.26
TSPAN4-205ENST00000397406 TNRC6BQ9UPQ9 1833 aaKnown RBP16.65■□□□□ 0.26
TSPAN4-205ENST00000397406 A0A1W2PPC4 97 aa16.65■□□□□ 0.26
TSPAN4-205ENST00000397406 METTL12A8MUP2 240 aa16.65■□□□□ 0.26
TSPAN4-205ENST00000397406 F8W8V4 182 aa16.65■□□□□ 0.26
TSPAN4-205ENST00000397406 PRAMEF26H0Y7S4 382 aa16.65■□□□□ 0.26
TSPAN4-205ENST00000397406 H0Y8X5 98 aa16.65■□□□□ 0.26
TSPAN4-205ENST00000397406 TM9SF1O15321 606 aa16.65■□□□□ 0.26
TSPAN4-205ENST00000397406 MAGEC1O60732 1142 aa16.65■□□□□ 0.26
TSPAN4-205ENST00000397406 ASMTLO95671 621 aa16.65■□□□□ 0.26
TSPAN4-205ENST00000397406 TSPAN12O95859 305 aa16.65■□□□□ 0.26
TSPAN4-205ENST00000397406 FTH1P02794 183 aa16.65■□□□□ 0.26
TSPAN4-205ENST00000397406 LTA4HP09960 611 aaKnown RBP16.65■□□□□ 0.26
TSPAN4-205ENST00000397406 AOAHP28039 575 aa16.65■□□□□ 0.26
TSPAN4-205ENST00000397406 CCR7P32248 378 aa16.65■□□□□ 0.26
TSPAN4-205ENST00000397406 ETV4P43268 484 aa16.65■□□□□ 0.26
TSPAN4-205ENST00000397406 KIAA1024LP59773 190 aa16.65■□□□□ 0.26
TSPAN4-205ENST00000397406 PFN3P60673 137 aa16.65■□□□□ 0.26
TSPAN4-205ENST00000397406 GTF2H3Q13889 308 aa16.65■□□□□ 0.26
TSPAN4-205ENST00000397406 CSHL1Q14406 222 aa16.65■□□□□ 0.26
TSPAN4-205ENST00000397406 N4BP2L1Q5TBK1 243 aaPredicted RBP16.65■□□□□ 0.26
TSPAN4-205ENST00000397406 C16orf46Q6P387 395 aa16.65■□□□□ 0.26
TSPAN4-205ENST00000397406 TMEM220Q6QAJ8 160 aa16.65■□□□□ 0.26
TSPAN4-205ENST00000397406 SLC36A4Q6YBV0 504 aa16.65■□□□□ 0.26
TSPAN4-205ENST00000397406 LPCAT2Q7L5N7 544 aa16.65■□□□□ 0.26
TSPAN4-205ENST00000397406 ZNF547Q8IVP9 402 aa16.65■□□□□ 0.26
TSPAN4-205ENST00000397406 BEND7Q8N7W2 519 aaPredicted RBP16.65■□□□□ 0.26
TSPAN4-205ENST00000397406 ANKRD42Q8N9B4 389 aa16.65■□□□□ 0.26
TSPAN4-205ENST00000397406 INPP5DQ92835 1189 aa16.65■□□□□ 0.26
TSPAN4-205ENST00000397406 ZNF514Q96K75 400 aaPredicted RBP16.65■□□□□ 0.26
TSPAN4-205ENST00000397406 EDEM2Q9BV94 578 aa16.65■□□□□ 0.26
TSPAN4-205ENST00000397406 TSSK1BQ9BXA7 367 aa16.65■□□□□ 0.26
TSPAN4-205ENST00000397406 IQCGQ9H095 443 aaKnown RBP16.65■□□□□ 0.26
TSPAN4-205ENST00000397406 TMEM216Q9P0N5 145 aa16.65■□□□□ 0.26
TSPAN4-205ENST00000397406 PILRBQ9UKJ0 227 aa16.65■□□□□ 0.26
TSPAN4-205ENST00000397406 GRID1Q9ULK0 1009 aa16.65■□□□□ 0.26
TSPAN4-205ENST00000397406 GPR34Q9UPC5 381 aa16.65■□□□□ 0.26
TSPAN4-205ENST00000397406 PCYT1BQ9Y5K3 369 aaPredicted RBP16.65■□□□□ 0.26
TSPAN4-205ENST00000397406 TMEM202A6NGA9 273 aa16.64■□□□□ 0.25
TSPAN4-205ENST00000397406 C4orf47A7E2U8 309 aa16.64■□□□□ 0.25
TSPAN4-205ENST00000397406 GPR89AB7ZAQ6 455 aa16.64■□□□□ 0.25
TSPAN4-205ENST00000397406 POLR3GO15318 223 aaPredicted RBP16.64■□□□□ 0.25
TSPAN4-205ENST00000397406 NUAK1O60285 661 aa16.64■□□□□ 0.25
TSPAN4-205ENST00000397406 ADRB1P08588 477 aa16.64■□□□□ 0.25
TSPAN4-205ENST00000397406 GPR89BP0CG08 455 aa16.64■□□□□ 0.25
TSPAN4-205ENST00000397406 CHN1P15882 459 aa16.64■□□□□ 0.25
TSPAN4-205ENST00000397406 GYS2P54840 703 aa16.64■□□□□ 0.25
TSPAN4-205ENST00000397406 WDR4P57081 412 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms