RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 PCDHGB7Q9Y5F8 929 aa13.83□□□□□ -0.2
COL4A3-202ENST00000396578 ASGR1P07306 291 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 PGAM2P15259 253 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 MAPK12P53778 367 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 ADGRE1Q14246 886 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 TIGD6Q17RP2 521 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 PARP15Q460N3 678 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 IL23RQ5VWK5 629 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 ADGRA1Q86SQ6 560 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 TMEM161BQ8NDZ6 487 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 METTL8Q9H825 291 aaKnown RBP13.82□□□□□ -0.2
COL4A3-202ENST00000396578 DDTLA6NHG4 134 aaPredicted RBP13.82□□□□□ -0.2
COL4A3-202ENST00000396578 NOMO3P69849 1222 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 DCLRE1AQ6PJP8 1040 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 ECHDC2Q86YB7 292 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 MCEMP1Q8IX19 187 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 SNTG1Q9NSN8 517 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.82□□□□□ -0.2
COL4A3-202ENST00000396578 STK16O75716 305 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 FAM155BO75949 473 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 PRAMEF1O95521 474 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 ADH1CP00326 375 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 ARL3P36405 182 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 CBLBQ13191 982 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 SLC9A9Q8IVB4 645 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 MIR1-1HGQ9H1L0 117 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 ERVK-5Q9HDB9 667 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 CALML5Q9NZT1 146 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 KERAO60938 352 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 PAGE1O75459 146 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 MT-ND1P03886 318 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 ITGB1P05556 798 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 YES1P07947 543 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 SHMT1P34896 483 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 CDH12P55289 794 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 ITPK1Q13572 414 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 RBM48Q5RL73 367 aaKnown RBP13.82□□□□□ -0.2
COL4A3-202ENST00000396578 ZNF782Q6ZMW2 699 aaPredicted RBP13.82□□□□□ -0.2
COL4A3-202ENST00000396578 SYVN1Q86TM6 617 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 LSM14AQ8ND56 463 aaKnown RBP13.82□□□□□ -0.2
COL4A3-202ENST00000396578 NXPE2Q96DL1 559 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 MTMR9Q96QG7 549 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 H3BM21 787 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 FSCN2O14926 492 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 ASLP04424 464 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 LGALS2P05162 132 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 EPHX2P34913 555 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 GXYLT1Q4G148 440 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 HDDC3Q8N4P3 179 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 KAT2AQ92830 837 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 KXD1Q9BQD3 176 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 ZNF471Q9BX82 626 aaPredicted RBP13.82□□□□□ -0.2
COL4A3-202ENST00000396578 MAFFQ9ULX9 164 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 CLDN5O00501 218 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 ACVR2AP27037 513 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 OR3A3P47888 321 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 OR3A2P47893 321 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 SMARCB1Q12824 385 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 ZDHHC21Q8IVQ6 265 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 ATP6V1C2Q8NEY4 427 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 TSPAN18Q96SJ8 248 aa13.82□□□□□ -0.2
COL4A3-202ENST00000396578 KIAA1522Q9P206 1035 aaPredicted RBP13.82□□□□□ -0.2
COL4A3-202ENST00000396578 GLYATL1P3A0A0U1RQE8 302 aa13.81□□□□□ -0.2
COL4A3-202ENST00000396578 NUAK1O60285 661 aa13.81□□□□□ -0.2
COL4A3-202ENST00000396578 SCNN1GP51170 649 aa13.81□□□□□ -0.2
COL4A3-202ENST00000396578 CDKL4Q5MAI5 379 aa13.81□□□□□ -0.2
COL4A3-202ENST00000396578 OGFRL1Q5TC84 451 aaPredicted RBP13.81□□□□□ -0.2
COL4A3-202ENST00000396578 EXOSC8Q96B26 276 aaKnown RBP13.81□□□□□ -0.2
COL4A3-202ENST00000396578 AP1S3Q96PC3 154 aa13.81□□□□□ -0.2
COL4A3-202ENST00000396578 DENND2DQ9H6A0 471 aaPredicted RBP13.81□□□□□ -0.2
COL4A3-202ENST00000396578 COMMD3Q9UBI1 195 aa13.81□□□□□ -0.2
COL4A3-202ENST00000396578 FBXO9Q9UK97 447 aaPredicted RBP13.81□□□□□ -0.2
COL4A3-202ENST00000396578 CDH7Q9ULB5 785 aa13.81□□□□□ -0.2
COL4A3-202ENST00000396578 TLR1Q15399 786 aa13.81□□□□□ -0.2
COL4A3-202ENST00000396578 NDUFA9Q16795 377 aa13.81□□□□□ -0.2
COL4A3-202ENST00000396578 CELF3Q5SZQ8 465 aaKnown RBP13.81□□□□□ -0.2
COL4A3-202ENST00000396578 LIX1Q8N485 282 aa13.81□□□□□ -0.2
COL4A3-202ENST00000396578 FITM2Q8N6M3 262 aa13.81□□□□□ -0.2
COL4A3-202ENST00000396578 MND1Q9BWT6 205 aa13.81□□□□□ -0.2
COL4A3-202ENST00000396578 TMLHEQ9NVH6 421 aa13.81□□□□□ -0.2
COL4A3-202ENST00000396578 TESMINQ9Y4I5 508 aa13.81□□□□□ -0.2
COL4A3-202ENST00000396578 TARBP1Q13395 1621 aaKnown RBP13.81□□□□□ -0.2
COL4A3-202ENST00000396578 OR6C70A6NIJ9 312 aa13.81□□□□□ -0.2
COL4A3-202ENST00000396578 MAGEB17A8MXT2 336 aa13.81□□□□□ -0.2
COL4A3-202ENST00000396578 hCG_2039718K7EN88 272 aa13.81□□□□□ -0.2
COL4A3-202ENST00000396578 SLC6A4P31645 630 aa13.81□□□□□ -0.2
COL4A3-202ENST00000396578 ADGRG6Q86SQ4 1221 aa13.81□□□□□ -0.2
COL4A3-202ENST00000396578 MPP5Q8N3R9 675 aa13.81□□□□□ -0.2
COL4A3-202ENST00000396578 SCGB3A2Q96PL1 93 aa13.81□□□□□ -0.2
COL4A3-202ENST00000396578 SLC39A3Q9BRY0 314 aa13.81□□□□□ -0.2
COL4A3-202ENST00000396578 NRXN1Q9ULB1 1477 aa13.81□□□□□ -0.2
COL4A3-202ENST00000396578 ANXA4P09525 319 aaPredicted RBP13.81□□□□□ -0.2
COL4A3-202ENST00000396578 PEPDP12955 493 aa13.81□□□□□ -0.2
COL4A3-202ENST00000396578 SLC9B1Q4ZJI4 515 aa13.81□□□□□ -0.2
COL4A3-202ENST00000396578 EIPR1Q53HC9 387 aa13.81□□□□□ -0.2
COL4A3-202ENST00000396578 GPR158Q5T848 1215 aa13.81□□□□□ -0.2
COL4A3-202ENST00000396578 NBPF12Q5TAG4 269 aaPredicted RBP13.81□□□□□ -0.2
COL4A3-202ENST00000396578 DNAJB7Q7Z6W7 309 aaPredicted RBP13.81□□□□□ -0.2
COL4A3-202ENST00000396578 RASGEF1CQ8N431 466 aa13.81□□□□□ -0.2
COL4A3-202ENST00000396578 OR10A6Q8NH74 314 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms