RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 TUBA1CQ9BQE3 449 aa14.13□□□□□ -0.15
CLIP2-203ENST00000395060 C6orf62Q9GZU0 229 aaPredicted RBP14.13□□□□□ -0.15
CLIP2-203ENST00000395060 ACTR8Q9H981 624 aa14.13□□□□□ -0.15
CLIP2-203ENST00000395060 GPN2Q9H9Y4 310 aaPredicted RBP14.13□□□□□ -0.15
CLIP2-203ENST00000395060 PRM3Q9NNZ6 103 aa14.13□□□□□ -0.15
CLIP2-203ENST00000395060 MRGBPQ9NV56 204 aa14.13□□□□□ -0.15
CLIP2-203ENST00000395060 LOC100130705A0A1B0GUX0 176 aa14.13□□□□□ -0.15
CLIP2-203ENST00000395060 PRSS23O95084 383 aa14.13□□□□□ -0.15
CLIP2-203ENST00000395060 SEC24AO95486 1093 aa14.13□□□□□ -0.15
CLIP2-203ENST00000395060 MMP3P08254 477 aa14.13□□□□□ -0.15
CLIP2-203ENST00000395060 GTF2E2P29084 291 aaKnown RBP14.13□□□□□ -0.15
CLIP2-203ENST00000395060 POLD2P49005 469 aa14.13□□□□□ -0.15
CLIP2-203ENST00000395060 COLEC12Q5KU26 742 aa14.13□□□□□ -0.15
CLIP2-203ENST00000395060 USP50Q70EL3 339 aaPredicted RBP14.13□□□□□ -0.15
CLIP2-203ENST00000395060 HID1Q8IV36 788 aa14.13□□□□□ -0.15
CLIP2-203ENST00000395060 OR2T12Q8NG77 320 aa14.13□□□□□ -0.15
CLIP2-203ENST00000395060 NPLOC4Q8TAT6 608 aa14.13□□□□□ -0.15
CLIP2-203ENST00000395060 STARD8Q92502 1023 aa14.13□□□□□ -0.15
CLIP2-203ENST00000395060 RORBQ92753 470 aa14.13□□□□□ -0.15
CLIP2-203ENST00000395060 SLC47A1Q96FL8 570 aa14.13□□□□□ -0.15
CLIP2-203ENST00000395060 SMARCD1Q96GM5 515 aa14.13□□□□□ -0.15
CLIP2-203ENST00000395060 MROQ9BYG7 248 aa14.13□□□□□ -0.15
CLIP2-203ENST00000395060 GMIPQ9P107 970 aa14.13□□□□□ -0.15
CLIP2-203ENST00000395060 OTOFQ9HC10 1997 aa14.13□□□□□ -0.15
CLIP2-203ENST00000395060 LINC00854A0A1B0GVQ3 168 aa14.13□□□□□ -0.15
CLIP2-203ENST00000395060 LDB2O43679 373 aa14.13□□□□□ -0.15
CLIP2-203ENST00000395060 CAPN1P07384 714 aa14.13□□□□□ -0.15
CLIP2-203ENST00000395060 RAP2AP10114 183 aa14.13□□□□□ -0.15
CLIP2-203ENST00000395060 BEX3Q00994 111 aa14.13□□□□□ -0.15
CLIP2-203ENST00000395060 SELENBP1Q13228 472 aa14.13□□□□□ -0.15
CLIP2-203ENST00000395060 PRKG2Q13237 762 aa14.13□□□□□ -0.15
CLIP2-203ENST00000395060 TIGD5Q53EQ6 642 aa14.13□□□□□ -0.15
CLIP2-203ENST00000395060 LRRTM3Q86VH5 581 aa14.13□□□□□ -0.15
CLIP2-203ENST00000395060 ANKRD13BQ86YJ7 626 aa14.13□□□□□ -0.15
CLIP2-203ENST00000395060 SLC22A15Q8IZD6 547 aa14.13□□□□□ -0.15
CLIP2-203ENST00000395060 RMDN1Q96DB5 314 aa14.13□□□□□ -0.15
CLIP2-203ENST00000395060 NMUR1Q9HB89 426 aa14.13□□□□□ -0.15
CLIP2-203ENST00000395060 VTA1Q9NP79 307 aa14.13□□□□□ -0.15
CLIP2-203ENST00000395060 SPATA7Q9P0W8 599 aa14.13□□□□□ -0.15
CLIP2-203ENST00000395060 ENPP5Q9UJA9 477 aa14.13□□□□□ -0.15
CLIP2-203ENST00000395060 IRAK2O43187 625 aa14.12□□□□□ -0.15
CLIP2-203ENST00000395060 CACNG3O60359 315 aa14.12□□□□□ -0.15
CLIP2-203ENST00000395060 MATN4O95460 622 aa14.12□□□□□ -0.15
CLIP2-203ENST00000395060 ANGPTL1O95841 491 aa14.12□□□□□ -0.15
CLIP2-203ENST00000395060 SLC2A4P14672 509 aa14.12□□□□□ -0.15
CLIP2-203ENST00000395060 HMGCS1Q01581 520 aa14.12□□□□□ -0.15
CLIP2-203ENST00000395060 GALNT1Q10472 559 aaPredicted RBP14.12□□□□□ -0.15
CLIP2-203ENST00000395060 PTPRNQ16849 979 aa14.12□□□□□ -0.15
CLIP2-203ENST00000395060 RFTN2Q52LD8 501 aaPredicted RBP14.12□□□□□ -0.15
CLIP2-203ENST00000395060 SYTL1Q8IYJ3 562 aa14.12□□□□□ -0.15
CLIP2-203ENST00000395060 EFHBQ8N7U6 833 aa14.12□□□□□ -0.15
CLIP2-203ENST00000395060 POC5Q8NA72 575 aa14.12□□□□□ -0.15
CLIP2-203ENST00000395060 MAGED4Q96JG8 741 aa14.12□□□□□ -0.15
CLIP2-203ENST00000395060 CGREF1Q99674 301 aa14.12□□□□□ -0.15
CLIP2-203ENST00000395060 SLC25A51Q9H1U9 297 aa14.12□□□□□ -0.15
CLIP2-203ENST00000395060 CATSPERZQ9NTU4 200 aa14.12□□□□□ -0.15
CLIP2-203ENST00000395060 COMMD8Q9NX08 183 aa14.12□□□□□ -0.15
CLIP2-203ENST00000395060 PMF1-BGLAPU3KQ54 211 aa14.12□□□□□ -0.15
CLIP2-203ENST00000395060 MOXD2PA6NHM9 499 aa14.12□□□□□ -0.15
CLIP2-203ENST00000395060 ZNF99A8MXY4 864 aaPredicted RBP14.12□□□□□ -0.15
CLIP2-203ENST00000395060 H0YAE9 185 aa14.12□□□□□ -0.15
CLIP2-203ENST00000395060 EEDO75530 441 aaKnown RBP14.12□□□□□ -0.15
CLIP2-203ENST00000395060 MYCLP1P12525 358 aaPredicted RBP14.12□□□□□ -0.15
CLIP2-203ENST00000395060 FDXRP22570 491 aa14.12□□□□□ -0.15
CLIP2-203ENST00000395060 DNAJB2P25686 324 aa14.12□□□□□ -0.15
CLIP2-203ENST00000395060 EPHA2P29317 976 aa14.12□□□□□ -0.15
CLIP2-203ENST00000395060 SERPINB1P30740 379 aa14.12□□□□□ -0.15
CLIP2-203ENST00000395060 ACVRL1P37023 503 aa14.12□□□□□ -0.15
CLIP2-203ENST00000395060 NEK2P51955 445 aa14.12□□□□□ -0.15
CLIP2-203ENST00000395060 AIF1P55008 147 aa14.12□□□□□ -0.15
CLIP2-203ENST00000395060 RPS3AP61247 264 aaKnown RBP14.12□□□□□ -0.15
CLIP2-203ENST00000395060 RPL38P63173 70 aaKnown RBP14.12□□□□□ -0.15
CLIP2-203ENST00000395060 MTA1Q13330 715 aa14.12□□□□□ -0.15
CLIP2-203ENST00000395060 RIMKLAQ8IXN7 391 aa14.12□□□□□ -0.15
CLIP2-203ENST00000395060 PGBD5Q8N414 524 aa14.12□□□□□ -0.15
CLIP2-203ENST00000395060 KRTCAP2Q8N6L1 136 aa14.12□□□□□ -0.15
CLIP2-203ENST00000395060 SCAIQ8N9R8 606 aa14.12□□□□□ -0.15
CLIP2-203ENST00000395060 EEF1AKMT1Q8WVE0 214 aa14.12□□□□□ -0.15
CLIP2-203ENST00000395060 TINF2Q9BSI4 451 aa14.12□□□□□ -0.15
CLIP2-203ENST00000395060 FAM124BQ9H5Z6 455 aaPredicted RBP14.12□□□□□ -0.15
CLIP2-203ENST00000395060 TLR5O60602 858 aa14.11□□□□□ -0.15
CLIP2-203ENST00000395060 UGT2B11O75310 529 aa14.11□□□□□ -0.15
CLIP2-203ENST00000395060 ZNF682O95780 498 aa14.11□□□□□ -0.15
CLIP2-203ENST00000395060 C1QCP02747 245 aa14.11□□□□□ -0.15
CLIP2-203ENST00000395060 S100BP04271 92 aaPredicted RBP14.11□□□□□ -0.15
CLIP2-203ENST00000395060 GDF5P43026 501 aa14.11□□□□□ -0.15
CLIP2-203ENST00000395060 ADAM17P78536 824 aa14.11□□□□□ -0.15
CLIP2-203ENST00000395060 EMX2Q04743 252 aa14.11□□□□□ -0.15
CLIP2-203ENST00000395060 LDLRAD1Q5T700 205 aa14.11□□□□□ -0.15
CLIP2-203ENST00000395060 TTC23Q5W5X9 447 aa14.11□□□□□ -0.15
CLIP2-203ENST00000395060 LETMD1Q6P1Q0 360 aa14.11□□□□□ -0.15
CLIP2-203ENST00000395060 CFAP52Q8N1V2 620 aa14.11□□□□□ -0.15
CLIP2-203ENST00000395060 STAG3L4Q8TBR4 150 aa14.11□□□□□ -0.15
CLIP2-203ENST00000395060 PNPT1Q8TCS8 783 aaKnown RBP14.11□□□□□ -0.15
CLIP2-203ENST00000395060 STON2Q8WXE9 905 aa14.11□□□□□ -0.15
CLIP2-203ENST00000395060 MS4A4AQ96JQ5 239 aa14.11□□□□□ -0.15
CLIP2-203ENST00000395060 TDRD1Q9BXT4 1180 aaKnown RBP14.11□□□□□ -0.15
CLIP2-203ENST00000395060 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.11□□□□□ -0.15
CLIP2-203ENST00000395060 TANC1Q9C0D5 1861 aa14.11□□□□□ -0.15
CLIP2-203ENST00000395060 A0A1W2PQH9 124 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms