RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 AKR1A1P14550 325 aa9.91□□□□□ -0.82
UBE2D3-208ENST00000394803 ZNF182P17025 639 aaPredicted RBP9.91□□□□□ -0.82
UBE2D3-208ENST00000394803 ARL1P40616 181 aaPredicted RBP9.91□□□□□ -0.82
UBE2D3-208ENST00000394803 BEX3Q00994 111 aa9.91□□□□□ -0.82
UBE2D3-208ENST00000394803 KCNC4Q03721 635 aa9.91□□□□□ -0.82
UBE2D3-208ENST00000394803 TRIM32Q13049 653 aa9.91□□□□□ -0.82
UBE2D3-208ENST00000394803 TRIM16LQ309B1 348 aa9.91□□□□□ -0.82
UBE2D3-208ENST00000394803 EML3Q32P44 896 aa9.91□□□□□ -0.82
UBE2D3-208ENST00000394803 CACHD1Q5VU97 1274 aa9.91□□□□□ -0.82
UBE2D3-208ENST00000394803 TMEM214Q6NUQ4 689 aaKnown RBP9.91□□□□□ -0.82
UBE2D3-208ENST00000394803 SLC2A7Q6PXP3 512 aa9.91□□□□□ -0.82
UBE2D3-208ENST00000394803 IL27RAQ6UWB1 636 aa9.91□□□□□ -0.82
UBE2D3-208ENST00000394803 SERINC5Q86VE9 423 aa9.91□□□□□ -0.82
UBE2D3-208ENST00000394803 ZC3H7AQ8IWR0 971 aaKnown RBP9.91□□□□□ -0.82
UBE2D3-208ENST00000394803 SPARTQ8N0X7 666 aa9.91□□□□□ -0.82
UBE2D3-208ENST00000394803 DTWD1Q8N5C7 304 aa9.91□□□□□ -0.82
UBE2D3-208ENST00000394803 CDYL2Q8N8U2 506 aa9.91□□□□□ -0.82
UBE2D3-208ENST00000394803 PIK3C3Q8NEB9 887 aa9.91□□□□□ -0.82
UBE2D3-208ENST00000394803 SLC13A3Q8WWT9 602 aa9.91□□□□□ -0.82
UBE2D3-208ENST00000394803 SNX19Q92543 992 aa9.91□□□□□ -0.82
UBE2D3-208ENST00000394803 FBXO32Q969P5 355 aa9.91□□□□□ -0.82
UBE2D3-208ENST00000394803 ZNF566Q969W8 418 aa9.91□□□□□ -0.82
UBE2D3-208ENST00000394803 LINGO1Q96FE5 620 aa9.91□□□□□ -0.82
UBE2D3-208ENST00000394803 SLC47A1Q96FL8 570 aa9.91□□□□□ -0.82
UBE2D3-208ENST00000394803 PSKH2Q96QS6 385 aa9.91□□□□□ -0.82
UBE2D3-208ENST00000394803 TOR3AQ9H497 397 aa9.91□□□□□ -0.82
UBE2D3-208ENST00000394803 NTN4Q9HB63 628 aa9.91□□□□□ -0.82
UBE2D3-208ENST00000394803 PDFQ9HBH1 243 aa9.91□□□□□ -0.82
UBE2D3-208ENST00000394803 SPC25Q9HBM1 224 aa9.91□□□□□ -0.82
UBE2D3-208ENST00000394803 UBA2Q9UBT2 640 aaPredicted RBP9.91□□□□□ -0.82
UBE2D3-208ENST00000394803 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.91□□□□□ -0.82
UBE2D3-208ENST00000394803 NUDT5Q9UKK9 219 aa9.91□□□□□ -0.82
UBE2D3-208ENST00000394803 HSPE1-MOB4S4R3N1 261 aa9.91□□□□□ -0.82
UBE2D3-208ENST00000394803 ELOVL7A1L3X0 281 aa9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 INSIG1O15503 277 aa9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 ARHGEF15O94989 841 aa9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 NTRK1P04629 796 aa9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 MATN1P21941 496 aa9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 ELK4P28324 431 aa9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 RYKP34925 604 aa9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 RGS4P49798 205 aa9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 AFF1P51825 1210 aaKnown RBP9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 ARHGDIAP52565 204 aa9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 MGAT3Q09327 533 aa9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 BFSP2Q13515 415 aa9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 ACOX1Q15067 660 aa9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 C5orf22Q49AR2 442 aa9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 C10orf120Q5SQS8 335 aa9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 XAF1Q6GPH4 301 aa9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 SULT1C3Q6IMI6 304 aa9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 GALNT18Q6P9A2 607 aa9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 CRTC3Q6UUV7 619 aa9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 XKR5Q6UX68 686 aa9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 CD300LGQ6UXG3 332 aa9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 CERS6Q6ZMG9 384 aa9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 R3HCC1LQ7Z5L2 792 aaKnown RBP9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 ANKRD13BQ86YJ7 626 aa9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 PARP8Q8N3A8 854 aa9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 OR4K2Q8NGD2 314 aa9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 OR2T11Q8NH01 316 aa9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 IGSF8Q969P0 613 aa9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 MUL1Q969V5 352 aa9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 FAM162AQ96A26 154 aa9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 TEX37Q96LM6 180 aa9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 EPS8L2Q9H6S3 715 aa9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 ANKHQ9HCJ1 492 aa9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 SCUBE2Q9NQ36 999 aa9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 ASIC5Q9NY37 505 aa9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 GALPQ9UBC7 116 aa9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 EIF2B4Q9UI10 523 aaKnown RBP9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 ENPP5Q9UJA9 477 aa9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 TDRKHQ9Y2W6 561 aaKnown RBP9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 PCDHGB1Q9Y5G3 927 aa9.9□□□□□ -0.82
UBE2D3-208ENST00000394803 C1orf232A0A0U1RR37 186 aa9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 SLC12A8A0AV02 714 aa9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 NCF1BA6NI72 391 aaPredicted RBP9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 NCF1CA8MVU1 366 aaPredicted RBP9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 H7C0S8 307 aa9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 UPK1AO00322 258 aa9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 SYN3O14994 580 aa9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 STX7O15400 261 aaKnown RBP9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 UGT2B11O75310 529 aa9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 DUSP11O75319 330 aaKnown RBP9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 EIF2S1P05198 315 aaKnown RBP9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 CTSHP09668 335 aa9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 NCF1P14598 390 aaPredicted RBP9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 TACR2P21452 398 aa9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 GRK3P35626 688 aa9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 PIK3CGP48736 1102 aa9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 APLP1P51693 650 aa9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 OXCT1P55809 520 aa9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 ECT2LQ008S8 904 aa9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 CYP4F3Q08477 520 aa9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 SMARCB1Q12824 385 aa9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 MAPKAPK3Q16644 382 aa9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 AP5B1Q2VPB7 878 aa9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 ZIK1Q3SY52 487 aaPredicted RBP9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 ATG9BQ674R7 924 aa9.9□□□□□ -0.83
UBE2D3-208ENST00000394803 GTF2IRD2BQ6EKJ0 949 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms